##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727053.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3748396 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.120241831439365 33.0 31.0 34.0 30.0 34.0 2 32.26736582794347 33.0 31.0 34.0 30.0 34.0 3 32.37238354752273 34.0 31.0 34.0 30.0 34.0 4 35.939812389085894 37.0 35.0 37.0 35.0 37.0 5 35.7375904253446 37.0 35.0 37.0 35.0 37.0 6 35.790279095378395 37.0 35.0 37.0 35.0 37.0 7 35.74643154031751 37.0 35.0 37.0 35.0 37.0 8 35.76830542984253 37.0 35.0 37.0 35.0 37.0 9 37.525137952340145 39.0 37.0 39.0 35.0 39.0 10 37.387808812089226 39.0 37.0 39.0 34.0 39.0 11 37.451024384830205 39.0 37.0 39.0 35.0 39.0 12 37.388293285981526 39.0 37.0 39.0 34.0 39.0 13 37.419282274338144 39.0 37.0 39.0 35.0 39.0 14 38.61264845016375 40.0 38.0 41.0 34.0 41.0 15 38.51597136481845 40.0 38.0 41.0 34.0 41.0 16 38.456339991825836 40.0 38.0 41.0 34.0 41.0 17 38.53323394860095 40.0 38.0 41.0 34.0 41.0 18 38.5453796770672 40.0 38.0 41.0 34.0 41.0 19 38.6018208855201 40.0 38.0 41.0 34.0 41.0 20 38.57557392548706 40.0 38.0 41.0 34.0 41.0 21 38.46933648419217 40.0 38.0 41.0 34.0 41.0 22 38.426255657086394 40.0 38.0 41.0 34.0 41.0 23 38.32140654295864 40.0 38.0 41.0 34.0 41.0 24 38.22741594004476 40.0 38.0 41.0 34.0 41.0 25 38.186261270153956 40.0 37.0 41.0 34.0 41.0 26 37.965619961178064 40.0 37.0 41.0 33.0 41.0 27 37.83424563466613 40.0 37.0 41.0 33.0 41.0 28 37.71779929335108 40.0 37.0 41.0 33.0 41.0 29 37.57998354496163 40.0 37.0 41.0 33.0 41.0 30 37.438686307423225 39.0 36.0 41.0 33.0 41.0 31 37.298192613587254 39.0 36.0 41.0 32.0 41.0 32 37.073648568614416 39.0 35.0 41.0 32.0 41.0 33 36.88191935964076 39.0 35.0 41.0 31.0 41.0 34 36.74956888226324 39.0 35.0 41.0 31.0 41.0 35 36.5957991098059 39.0 35.0 40.0 31.0 41.0 36 36.34588581355865 39.0 35.0 40.0 30.0 41.0 37 36.2130775403666 39.0 35.0 40.0 30.0 41.0 38 36.07141961521675 39.0 35.0 40.0 30.0 41.0 39 35.86031011664723 39.0 35.0 40.0 28.0 41.0 40 35.64623961822603 39.0 35.0 40.0 27.0 41.0 41 35.46158036664216 38.0 35.0 40.0 26.0 41.0 42 35.12715412138952 38.0 35.0 40.0 24.0 41.0 43 33.937287842586535 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 13.0 10 40.0 11 38.0 12 52.0 13 30.0 14 36.0 15 45.0 16 80.0 17 129.0 18 226.0 19 444.0 20 893.0 21 1641.0 22 2996.0 23 5139.0 24 8442.0 25 13490.0 26 20416.0 27 30063.0 28 41342.0 29 55038.0 30 69637.0 31 85618.0 32 107271.0 33 136218.0 34 178830.0 35 237983.0 36 351133.0 37 578093.0 38 962697.0 39 860317.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.98076083743553 18.295852412605285 12.432971329603381 23.2904154203558 2 17.24233512147596 22.948562531813607 35.29122856816622 24.517873778544207 3 21.064690070099317 26.05773242741695 29.22799512111314 23.64958238137059 4 14.363957276659137 15.724379174452219 33.15279388837252 36.758869660516126 5 13.757217753940617 39.041552706811125 32.30645854920345 14.894770990044808 6 32.984802032656106 33.49518033847011 17.17081119497513 16.34920643389866 7 27.29223379813659 32.02668554763157 22.383520844649286 18.297559809582552 8 28.47185836288375 32.562594773871275 21.15795662998253 17.80759023326244 9 28.475513259538214 13.455702118986363 20.72358416773468 37.345200453740745 10 18.019947732310033 27.444085416802285 31.58652394250768 22.94944290838001 11 33.72594571117886 22.773581019721505 21.492953252537887 22.007520016561752 12 21.79073395660437 27.688830102262408 29.81160475040524 20.70883119072798 13 29.853435976348287 19.47993221634 27.305839617799187 23.360792189512527 14 22.660919497299645 21.658277300477323 27.694352464360755 27.986450737862274 15 25.869892081839808 26.625975483913656 24.84518711470186 22.658945319544678 16 22.30001846122982 26.007630997365272 28.221084431847647 23.471266109557263 17 22.647527102259208 27.201288231019348 27.3559143697731 22.79527029694835 18 22.63021302978661 24.139205142679696 30.12179076063468 23.108791066899016 19 22.753465749083073 25.775131549601483 30.296158676938084 21.17524402437736 20 22.773367595099344 24.780759556887798 30.301974497891898 22.143898350120956 21 23.457793680283515 25.35548538628256 30.117895761280288 21.068825172153634 22 23.33115284511028 25.238315268717603 28.602340841255835 22.82819104491628 23 21.70640455277404 25.861888658508864 29.796184821454297 22.635521967262797 24 21.575441869002102 27.423089769597446 29.236478749843936 21.76498961155652 25 22.320934074201336 26.03548291055694 28.75187146715555 22.891711548086167 26 22.235510869182445 26.573473026862686 29.51753229914876 21.67348380480611 27 22.53718657260332 26.552850872746635 28.568966565965816 22.340995988684227 28 21.487884417761624 27.1387014605714 29.824383549656975 21.54903057201 29 21.787959436516314 26.773638644369484 29.951131097141282 21.487270821972917 30 21.496501436881267 27.878217776350205 29.82371659771273 20.8015641890558 31 22.387175741303746 27.06197530890546 28.585213515327624 21.965635434463167 32 20.61489767890052 27.82166025147823 29.228635394979612 22.334806674641634 33 20.791826690669822 27.398039054571612 29.58748221906117 22.2226520356974 34 21.239084664480487 27.368506422480444 29.56037729204705 21.83203162099202 35 21.322960540988735 27.727593349261927 29.715723738900586 21.233722370848756 36 21.041613532828443 27.756058858242298 28.974926875388835 22.227400733540424 37 21.018857132490805 27.621948161293524 29.432562621451947 21.92663208476372 38 20.971716969071572 27.145637760791548 29.681442408966397 22.201202861170486 39 21.08536558037091 26.536763991851448 29.578651775319365 22.79921865245828 40 21.064903494721477 27.069018321436687 29.91428867174119 21.951789512100643 41 19.974036894714434 27.420848811064786 30.101115250363087 22.503999043857693 42 20.794467820369032 27.69611321749356 29.737092879194194 21.77232608294321 43 20.064795715287286 26.652680239761224 29.770573866795292 23.511950178156205 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 890.0 1 1320.5 2 1751.0 3 6611.5 4 11472.0 5 11472.0 6 16673.5 7 21875.0 8 21127.0 9 20379.0 10 27754.0 11 35129.0 12 35129.0 13 51812.5 14 68496.0 15 85636.5 16 102777.0 17 87824.5 18 72872.0 19 72872.0 20 73447.5 21 74023.0 22 58124.0 23 42225.0 24 47630.5 25 53036.0 26 53036.0 27 57492.0 28 61948.0 29 65062.0 30 68176.0 31 72423.0 32 76670.0 33 76670.0 34 86159.0 35 95648.0 36 110454.5 37 125261.0 38 142145.0 39 159029.0 40 159029.0 41 174016.5 42 189004.0 43 204289.5 44 219575.0 45 244545.0 46 269515.0 47 269515.0 48 307395.0 49 345275.0 50 342419.0 51 339563.0 52 302547.5 53 265532.0 54 265532.0 55 251941.5 56 238351.0 57 225289.0 58 212227.0 59 196701.5 60 181176.0 61 181176.0 62 154154.0 63 127132.0 64 110688.0 65 94244.0 66 79755.5 67 65267.0 68 65267.0 69 53496.5 70 41726.0 71 35368.5 72 29011.0 73 21955.5 74 14900.0 75 14900.0 76 11840.0 77 8780.0 78 7460.5 79 6141.0 80 4997.0 81 3853.0 82 3853.0 83 3168.5 84 2484.0 85 2141.0 86 1798.0 87 1212.0 88 626.0 89 626.0 90 471.5 91 317.0 92 221.0 93 125.0 94 111.5 95 98.0 96 98.0 97 55.0 98 12.0 99 9.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3748396.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.194852618356 #Duplication Level Percentage of deduplicated Percentage of total 1 83.22779651508105 40.11151386794855 2 8.687305061200613 8.373667741505235 3 2.836362038417563 4.100941512415028 4 1.4005616382959485 2.6999944696238587 5 0.8425263812968206 2.030271738683854 6 0.5365796331601299 1.5516225802898396 7 0.38113723318540416 1.2858196946516975 8 0.28230610560803077 1.0884560922432873 9 0.23368632514160206 1.013623019921226 >10 1.3663942962465367 12.13191087206565 >50 0.10637899282824363 3.570515634241303 >100 0.08006552008182587 8.0140088076971 >500 0.01241703092568362 4.081048896879781 >1k 0.005714031925273231 4.541527610587046 >5k 5.494261466608876E-4 1.8083388446350996 >10k+ 2.1977045866435502E-4 3.596738616611465 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 45379 1.2106244911156665 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 34654 0.9245021070345822 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 31821 0.8489231127127443 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23977 0.6396602706864483 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 9263 0.24711903438163949 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8929 0.23820855640652697 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8389 0.22380239441083602 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 7823 0.20870260239313027 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6259 0.1669780887611661 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6067 0.16185589782936488 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5814 0.15510634415360597 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 5533 0.14760980430029272 No Hit GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA 5161 0.13768555936992782 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 5054 0.13483100504855944 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAA 3809 0.10161679822516086 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.003423330939421E-5 2 0.0 0.0 0.0 0.0 8.003423330939421E-5 3 0.0 0.0 0.0 0.0 8.003423330939421E-5 4 0.0 0.0 0.0 2.667807776979807E-5 8.003423330939421E-5 5 0.0 2.667807776979807E-5 0.0 5.335615553959614E-5 8.003423330939421E-5 6 5.335615553959614E-5 2.667807776979807E-5 0.0 5.335615553959614E-5 8.003423330939421E-5 7 5.335615553959614E-5 2.667807776979807E-5 0.0 5.335615553959614E-5 8.003423330939421E-5 8 5.335615553959614E-5 2.667807776979807E-5 0.0 5.335615553959614E-5 8.003423330939421E-5 9 5.335615553959614E-5 2.667807776979807E-5 0.0 1.3339038884899033E-4 8.003423330939421E-5 10 5.335615553959614E-5 2.667807776979807E-5 0.0 2.4010269992818262E-4 8.003423330939421E-5 11 5.335615553959614E-5 2.667807776979807E-5 0.0 5.068834776261633E-4 8.003423330939421E-5 12 5.335615553959614E-5 2.667807776979807E-5 0.0 9.870888774825286E-4 8.003423330939421E-5 13 5.335615553959614E-5 5.335615553959614E-5 0.0 0.0012005134996409131 8.003423330939421E-5 14 5.335615553959614E-5 5.335615553959614E-5 0.0 0.0021075681438140472 1.0671231107919228E-4 15 5.335615553959614E-5 5.335615553959614E-5 0.0 0.0032814035656851624 1.0671231107919228E-4 16 5.335615553959614E-5 5.335615553959614E-5 0.0 0.006616163286909921 1.3339038884899033E-4 17 5.335615553959614E-5 5.335615553959614E-5 0.0 0.01064455303014943 1.3339038884899033E-4 18 5.335615553959614E-5 5.335615553959614E-5 0.0 0.013045580029431255 2.1342462215838455E-4 19 5.335615553959614E-5 5.335615553959614E-5 0.0 0.01728739439482915 2.4010269992818262E-4 20 5.335615553959614E-5 5.335615553959614E-5 0.0 0.020968969127061282 2.4010269992818262E-4 21 5.335615553959614E-5 5.335615553959614E-5 0.0 0.03134674137951273 2.4010269992818262E-4 22 5.335615553959614E-5 5.335615553959614E-5 0.0 0.045806259530743285 2.6678077769798066E-4 23 5.335615553959614E-5 5.335615553959614E-5 0.0 0.07147057034528903 3.73493088777173E-4 24 5.335615553959614E-5 5.335615553959614E-5 0.0 0.10996703656710764 3.73493088777173E-4 25 5.335615553959614E-5 5.335615553959614E-5 0.0 0.12656080093992203 3.73493088777173E-4 26 5.335615553959614E-5 5.335615553959614E-5 0.0 0.15147812557691342 3.73493088777173E-4 27 5.335615553959614E-5 5.335615553959614E-5 0.0 0.19320263920887762 3.73493088777173E-4 28 5.335615553959614E-5 5.335615553959614E-5 0.0 0.2831077612930971 3.73493088777173E-4 29 5.335615553959614E-5 5.335615553959614E-5 0.0 0.38501801837372573 3.73493088777173E-4 30 5.335615553959614E-5 5.335615553959614E-5 0.0 0.5441527522705712 3.73493088777173E-4 31 5.335615553959614E-5 5.335615553959614E-5 0.0 0.9117233077828489 3.73493088777173E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 485 0.0 18.690722 28 CTAGCGG 500 0.0 18.13 29 TCGTTAC 320 0.0 16.765625 23 CAAGACG 825 0.0 16.145454 4 AAGACGG 785 0.0 16.025478 5 TAGCGGC 600 0.0 15.724999 30 TATACTG 385 0.0 15.376623 5 GTTACGG 515 0.0 15.087378 25 CGCAATA 620 0.0 14.919355 36 GCGCAAT 640 0.0 14.742188 35 ATACCGT 645 0.0 14.341085 6 CCGTTAA 105 1.6572075E-4 14.095239 36 CGTTACG 330 0.0 14.015151 24 AATACCG 80 0.0063021253 13.875001 5 CTTATAC 3750 0.0 13.714666 37 TACGGAT 705 0.0 13.6453905 27 ACGGATG 670 0.0 13.529851 28 ACGGACC 870 0.0 13.396552 8 GGCGCAA 955 0.0 13.366493 34 CATGGGT 3030 0.0 13.310231 4 >>END_MODULE