##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727052.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4610622 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.201978388165415 33.0 31.0 34.0 30.0 34.0 2 32.37423584063061 34.0 31.0 34.0 30.0 34.0 3 32.48217507312462 34.0 31.0 34.0 30.0 34.0 4 36.033452319448436 37.0 35.0 37.0 35.0 37.0 5 35.8319998906872 37.0 35.0 37.0 35.0 37.0 6 35.868716194908195 37.0 35.0 37.0 35.0 37.0 7 35.828267639377074 37.0 35.0 37.0 35.0 37.0 8 35.83431020803701 37.0 35.0 37.0 35.0 37.0 9 37.6188355931152 39.0 37.0 39.0 35.0 39.0 10 37.47886857781879 39.0 37.0 39.0 35.0 39.0 11 37.54420032698408 39.0 37.0 39.0 35.0 39.0 12 37.47209248556919 39.0 37.0 39.0 35.0 39.0 13 37.50065717814213 39.0 37.0 39.0 35.0 39.0 14 38.744501934879935 40.0 38.0 41.0 35.0 41.0 15 38.65330014041489 40.0 38.0 41.0 35.0 41.0 16 38.61473441110549 40.0 38.0 41.0 34.0 41.0 17 38.647231111116895 40.0 38.0 41.0 35.0 41.0 18 38.64840492237273 40.0 38.0 41.0 35.0 41.0 19 38.70356320687317 40.0 38.0 41.0 35.0 41.0 20 38.66367748212714 40.0 38.0 41.0 34.0 41.0 21 38.565254319265385 40.0 38.0 41.0 34.0 41.0 22 38.52195322019458 40.0 38.0 41.0 34.0 41.0 23 38.43627584304244 40.0 38.0 41.0 34.0 41.0 24 38.35546115036106 40.0 38.0 41.0 34.0 41.0 25 38.31183167910967 40.0 38.0 41.0 34.0 41.0 26 38.11493286589098 40.0 38.0 41.0 34.0 41.0 27 37.99851213133499 40.0 37.0 41.0 33.0 41.0 28 37.89583899959702 40.0 37.0 41.0 33.0 41.0 29 37.779302228636396 40.0 37.0 41.0 33.0 41.0 30 37.68063918490824 40.0 37.0 41.0 33.0 41.0 31 37.58645861664652 40.0 37.0 41.0 33.0 41.0 32 37.42181792391569 40.0 36.0 41.0 32.0 41.0 33 37.255200491387065 39.0 36.0 41.0 32.0 41.0 34 37.16179292078162 39.0 36.0 41.0 31.0 41.0 35 37.04433436529822 39.0 36.0 41.0 31.0 41.0 36 36.84236205006613 39.0 35.0 41.0 31.0 41.0 37 36.75587892479583 39.0 35.0 41.0 31.0 41.0 38 36.65193329663546 39.0 35.0 41.0 30.0 41.0 39 36.49572877585714 39.0 35.0 41.0 30.0 41.0 40 36.32739508899233 39.0 35.0 41.0 30.0 41.0 41 36.19596726862449 39.0 35.0 40.0 29.0 41.0 42 35.924981488397876 39.0 35.0 40.0 28.0 41.0 43 34.69204588881934 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 18.0 11 30.0 12 32.0 13 38.0 14 25.0 15 50.0 16 107.0 17 144.0 18 223.0 19 427.0 20 896.0 21 1686.0 22 3000.0 23 5222.0 24 8647.0 25 13490.0 26 20351.0 27 29748.0 28 41638.0 29 56362.0 30 74187.0 31 93710.0 32 118632.0 33 153869.0 34 206228.0 35 277527.0 36 406383.0 37 666544.0 38 1189971.0 39 1241425.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.981002563211646 18.087798132225977 12.218243004956815 24.712956299605562 2 17.810113255868732 21.59190235070236 35.63350020886553 24.964484184563386 3 20.340314170192222 24.561414924060138 29.367360846323987 25.73091005942365 4 14.293602902168082 15.265554192037431 33.86916125416484 36.57168165162965 5 14.32986698974672 37.79956370311858 32.832077754368065 15.038491552766633 6 34.00415388639537 34.06902582775166 16.45892896880291 15.467891317050064 7 28.35571859935601 31.33063174556491 21.872168223723392 18.441481431355683 8 27.850602369918853 33.34465501617786 20.447761711977254 18.356980901926033 9 28.140281289596068 13.608597711978993 20.003635084376903 38.24748591404804 10 17.65360508842408 26.64263086412202 32.08415263710623 23.61961141034767 11 35.29211459972212 22.025986949266283 21.362844319052833 21.31905413195877 12 21.9085841346352 26.251382134557982 29.772772523967483 22.067261206839337 13 30.13038154071186 19.351120087484944 26.249777145035964 24.268721226767234 14 22.805491319826263 20.89210523005356 26.528156070916246 29.774247379203935 15 25.72839412990265 26.95811975043714 23.535045813775234 23.778440305884978 16 23.774210941603975 25.7679766417633 26.243313808852687 24.214498607780037 17 23.364808479203024 26.568367565157153 26.15933381656531 23.90749013907451 18 23.462908041474666 24.46574453511912 28.151429460059834 23.919917963346375 19 23.902566725270475 25.21631571618753 28.262412316602838 22.618705241939157 20 23.835157165345585 24.565579221198355 28.127506440562684 23.471757172893376 21 24.628867862080213 24.959517392664157 28.014853527354877 22.396761217900753 22 24.404885067567893 24.64498282444321 27.244718825355886 23.705413282633014 23 23.099746628545997 25.11962594200956 27.988262755003557 23.79236467444089 24 23.009953971503194 26.125607347555274 27.640088473962948 23.22435020697858 25 23.564174204695156 25.370459777444342 27.281178114362874 23.78418790349762 26 23.42551612342109 25.907242016370024 27.677480392016523 22.98976146819236 27 23.713329785005147 25.788971639835147 27.08979395838566 23.40790461677405 28 22.863466144047376 26.16668640369998 27.8872568603542 23.082590591898448 29 22.94584114681273 26.14790368848281 28.0308600444799 22.87539512022456 30 22.959678759178264 26.57879999705029 27.90749274176022 22.554028502011224 31 23.514376151417316 26.023864025287697 27.184987188279585 23.276772635015405 32 22.339653955583433 26.507161072844404 27.435951157999938 23.717233813572225 33 22.305515394669094 25.99898668769637 27.953018052661875 23.742479864972665 34 23.04610961384386 26.05633252953723 27.95232400313884 22.945233853480072 35 23.06682265429697 26.092878574734602 28.04649784779581 22.793800923172622 36 22.386589054578753 26.37609415822854 27.676829720588675 23.56048706660403 37 22.56587072199803 26.008941960542415 28.037280002567982 23.38790731489157 38 22.395221295521512 25.525493089652546 28.366346232677497 23.71293938214844 39 22.38582993791293 25.265181140418797 28.50595863204574 23.843030289622526 40 22.536330239173804 25.50148331396501 28.819213546458588 23.14297290040259 41 21.482242526062645 25.823305402177844 29.115616070890216 23.578836000869295 42 22.057110732564933 26.026401643856296 28.76817921746784 23.14830840611093 43 21.329833588613422 25.263424327563612 28.786961932685006 24.61978015113796 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 982.0 1 1289.0 2 1596.0 3 5426.5 4 9257.0 5 9257.0 6 12872.0 7 16487.0 8 15894.5 9 15302.0 10 21060.5 11 26819.0 12 26819.0 13 40194.5 14 53570.0 15 67395.0 16 81220.0 17 70470.0 18 59720.0 19 59720.0 20 61280.0 21 62840.0 22 51070.0 23 39300.0 24 45155.0 25 51010.0 26 51010.0 27 57769.5 28 64529.0 29 70018.0 30 75507.0 31 83174.0 32 90841.0 33 90841.0 34 105389.5 35 119938.0 36 140500.0 37 161062.0 38 184269.0 39 207476.0 40 207476.0 41 227403.5 42 247331.0 43 265741.5 44 284152.0 45 311635.5 46 339119.0 47 339119.0 48 369203.5 49 399288.0 50 401072.5 51 402857.0 52 381503.0 53 360149.0 54 360149.0 55 346069.0 56 331989.0 57 314268.5 58 296548.0 59 274304.0 60 252060.0 61 252060.0 62 215174.0 63 178288.0 64 155218.0 65 132148.0 66 111781.0 67 91414.0 68 91414.0 69 75356.0 70 59298.0 71 50515.5 72 41733.0 73 31777.5 74 21822.0 75 21822.0 76 17398.0 77 12974.0 78 10896.5 79 8819.0 80 7143.0 81 5467.0 82 5467.0 83 4547.5 84 3628.0 85 3033.0 86 2438.0 87 1650.0 88 862.0 89 862.0 90 652.5 91 443.0 92 306.0 93 169.0 94 158.5 95 148.0 96 148.0 97 82.5 98 17.0 99 11.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4610622.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.83710765309504 #Duplication Level Percentage of deduplicated Percentage of total 1 82.83619564411997 42.11152595532969 2 8.86930729053362 9.017798590744764 3 2.9311627373208005 4.470355068777548 4 1.4418037260090577 2.9318852493502403 5 0.864311749136471 2.1969554718342823 6 0.5738866526748676 1.750484252562396 7 0.3738035860700342 1.3302165202308711 8 0.3019553661435573 1.22804299640558 9 0.23225834932796854 1.062660843730448 >10 1.3928459212786084 12.971649075535337 >50 0.10057436713887971 3.515109611665755 >100 0.06621103969908348 6.755586124416898 >500 0.01041321117613164 3.632696611878709 >1k 0.00501534198213214 4.367839571073817 >5k 8.500579630732118E-5 0.28400561631977195 >10k+ 1.7001159261464236E-4 2.3731884401437546 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 36115 0.7832999538890849 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 28640 0.6211743231173582 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26367 0.5718751179341963 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18711 0.40582376954779636 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6654 0.14431892269633034 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6490 0.14076191889077005 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4917 0.10664504702402408 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4781 0.10369533655112044 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 4.337809518975965E-5 3 0.0 0.0 0.0 0.0 4.337809518975965E-5 4 0.0 0.0 0.0 2.1689047594879825E-5 4.337809518975965E-5 5 0.0 0.0 0.0 6.506714278463946E-5 4.337809518975965E-5 6 2.1689047594879825E-5 0.0 0.0 6.506714278463946E-5 6.506714278463946E-5 7 2.1689047594879825E-5 0.0 0.0 8.67561903795193E-5 6.506714278463946E-5 8 2.1689047594879825E-5 0.0 0.0 8.67561903795193E-5 6.506714278463946E-5 9 2.1689047594879825E-5 0.0 0.0 1.3013428556927893E-4 6.506714278463946E-5 10 2.1689047594879825E-5 0.0 0.0 2.6026857113855786E-4 8.67561903795193E-5 11 2.1689047594879825E-5 0.0 0.0 4.1209190430271665E-4 8.67561903795193E-5 12 2.1689047594879825E-5 0.0 0.0 6.289823802515149E-4 8.67561903795193E-5 13 4.337809518975965E-5 2.1689047594879825E-5 0.0 8.024947610105535E-4 8.67561903795193E-5 14 4.337809518975965E-5 2.1689047594879825E-5 0.0 0.0013230319032876692 1.0844523797439912E-4 15 4.337809518975965E-5 2.1689047594879825E-5 0.0 0.0020604595215135833 1.952014283539184E-4 16 8.67561903795193E-5 2.1689047594879825E-5 0.0 0.004836657613658201 2.3857952354367805E-4 17 8.67561903795193E-5 2.1689047594879825E-5 0.0 0.00728751999187962 2.3857952354367805E-4 18 8.67561903795193E-5 2.1689047594879825E-5 0.0 0.008415350466813371 2.3857952354367805E-4 19 8.67561903795193E-5 4.337809518975965E-5 0.0 0.010757767607060393 2.3857952354367805E-4 20 8.67561903795193E-5 4.337809518975965E-5 0.0 0.012883294271358614 2.3857952354367805E-4 21 8.67561903795193E-5 4.337809518975965E-5 0.0 0.01826217807488881 2.3857952354367805E-4 22 8.67561903795193E-5 4.337809518975965E-5 0.0 0.02600516806626091 2.3857952354367805E-4 23 8.67561903795193E-5 4.337809518975965E-5 0.0 0.0396692680510352 3.68713809112957E-4 24 8.67561903795193E-5 4.337809518975965E-5 0.0 0.06027386326617103 3.904028567078368E-4 25 8.67561903795193E-5 4.337809518975965E-5 0.0 0.06992548944589255 3.904028567078368E-4 26 8.67561903795193E-5 4.337809518975965E-5 0.0 0.08328594276433852 3.904028567078368E-4 27 8.67561903795193E-5 4.337809518975965E-5 0.0 0.11540742225235553 3.904028567078368E-4 28 8.67561903795193E-5 4.337809518975965E-5 0.0 0.1930759016896202 3.904028567078368E-4 29 8.67561903795193E-5 4.337809518975965E-5 0.0 0.2885077111070914 3.904028567078368E-4 30 8.67561903795193E-5 4.337809518975965E-5 0.0 0.43228440761354975 3.904028567078368E-4 31 8.67561903795193E-5 4.337809518975965E-5 0.0 0.7927346895928575 3.904028567078368E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGCGG 800 0.0 14.56875 29 CTTATAC 4200 0.0 14.535714 37 GGACCGT 220 1.8189894E-11 14.295454 6 TCTAGCG 810 0.0 13.932098 28 GTCCTAT 955 0.0 13.560209 1 TCTTATA 6530 0.0 13.5137825 37 ATACCGT 785 0.0 13.433121 6 AAGACGG 925 0.0 13.4 5 GGGTACG 125 4.8505688E-5 13.32 1 GCGCAAT 870 0.0 12.971265 35 CCTATTC 1070 0.0 12.967289 3 TACCGTA 100 0.0018339353 12.950001 7 TAGCGGC 890 0.0 12.88764 30 CGCAATA 895 0.0 12.815642 36 CGGCGCA 1295 0.0 12.714286 33 TACCGTC 760 0.0 12.657895 7 GTACTAA 205 2.0701918E-8 12.634146 1 GCCGGTC 1045 0.0 12.569378 8 CATGGGT 3135 0.0 12.392344 4 TACTATA 540 0.0 12.333334 2 >>END_MODULE