##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727049.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2257893 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.01440147960953 31.0 31.0 33.0 28.0 34.0 2 31.142583373082783 31.0 31.0 34.0 28.0 34.0 3 31.210594124699444 31.0 31.0 34.0 28.0 34.0 4 35.03557918820777 35.0 35.0 37.0 32.0 37.0 5 34.22937003657835 35.0 35.0 37.0 30.0 37.0 6 34.302067901357596 35.0 35.0 37.0 30.0 37.0 7 34.23181125057742 35.0 35.0 37.0 30.0 37.0 8 34.22112828198679 35.0 35.0 37.0 30.0 37.0 9 35.75146342187163 37.0 35.0 39.0 30.0 39.0 10 35.39503820597344 37.0 35.0 39.0 30.0 39.0 11 35.62750316334742 37.0 35.0 39.0 30.0 39.0 12 35.47623115887245 37.0 35.0 39.0 30.0 39.0 13 35.581053663747575 37.0 35.0 39.0 30.0 39.0 14 36.355064212520254 38.0 35.0 40.0 31.0 41.0 15 36.214822845901026 38.0 35.0 40.0 30.0 41.0 16 36.08453323518874 38.0 34.0 40.0 30.0 41.0 17 36.19771486071306 38.0 35.0 40.0 30.0 41.0 18 36.196783461395206 38.0 35.0 40.0 30.0 41.0 19 36.27163510405497 38.0 35.0 40.0 30.0 41.0 20 36.24520205341883 38.0 35.0 40.0 30.0 41.0 21 36.102371990169594 38.0 34.0 40.0 29.0 41.0 22 36.07417534843325 38.0 34.0 40.0 30.0 41.0 23 35.92607355618712 38.0 34.0 40.0 29.0 41.0 24 35.781530391387015 38.0 34.0 40.0 29.0 41.0 25 35.744839104421686 38.0 34.0 40.0 29.0 41.0 26 35.40740017352461 38.0 34.0 40.0 27.0 41.0 27 35.233872021393395 38.0 34.0 40.0 27.0 41.0 28 35.06931196473881 37.0 33.0 40.0 27.0 40.0 29 34.86675187885343 37.0 33.0 39.0 26.0 40.0 30 34.68565560901247 37.0 33.0 39.0 26.0 40.0 31 34.53927001855269 37.0 33.0 39.0 25.0 40.0 32 34.26262670551704 37.0 33.0 39.0 25.0 40.0 33 34.02885344876839 36.0 33.0 39.0 24.0 40.0 34 33.874584845251746 36.0 33.0 39.0 24.0 40.0 35 33.66391232888361 36.0 32.0 39.0 23.0 40.0 36 33.357645822897716 36.0 31.0 39.0 21.0 40.0 37 33.21477412791483 36.0 31.0 39.0 21.0 40.0 38 33.04825383665214 36.0 31.0 39.0 21.0 40.0 39 32.7930424515245 35.0 31.0 39.0 19.0 40.0 40 32.52195476047802 35.0 31.0 39.0 18.0 40.0 41 32.28622614091987 35.0 30.0 39.0 16.0 40.0 42 31.879554079843466 35.0 30.0 38.0 15.0 40.0 43 30.68555020100598 34.0 27.0 38.0 11.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 9.0 10 14.0 11 17.0 12 9.0 13 30.0 14 63.0 15 123.0 16 207.0 17 382.0 18 731.0 19 1368.0 20 2536.0 21 4311.0 22 7219.0 23 11173.0 24 16559.0 25 24232.0 26 33326.0 27 45037.0 28 57803.0 29 73682.0 30 91600.0 31 113466.0 32 140717.0 33 177001.0 34 223146.0 35 282153.0 36 338638.0 37 331558.0 38 223141.0 39 57641.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.30303251748422 19.298788737996 12.864161410660294 22.534017333859488 2 17.627673233408313 24.366655107217216 33.98540143399178 24.020270225382692 3 22.076289709034043 26.591605536666265 29.108420992491673 22.223683761808022 4 15.379913928605122 16.07848556153901 32.327971254616585 36.21362925523929 5 13.754681909195874 39.98670441867706 31.479968271304266 14.778645400822802 6 33.18890664880931 33.41230076004487 16.69538813398155 16.703404457164268 7 26.951232852929703 32.50667768578936 22.215933173095447 18.326156288185487 8 28.93719941556132 32.551276787695436 20.967866944979235 17.543656851764013 9 28.772886934854753 13.18725023727874 20.77286213297087 37.26700069489564 10 18.21348487284384 28.158863152505454 31.20905197899103 22.418599995659672 11 33.507655145748714 23.030542191326163 21.17646850404337 22.285334158881753 12 21.698946761427578 28.294742044906467 29.616505299409674 20.389805894256284 13 29.977992756964127 19.47594505142626 27.4057716641134 23.14029052749621 14 22.765117744729267 21.7520493663783 28.105849125711448 27.376983763180984 15 26.05703636089044 26.697146410392342 25.052604352819195 22.193212875898016 16 21.84926389337316 26.001453567551696 28.792551285645512 23.356731253429636 17 22.393399510074214 27.361482585755837 27.838431670588466 22.406686233581485 18 22.188828257140617 24.028729439348986 30.8708162875743 22.911626015936097 19 22.546462564877963 25.727171305283285 31.049611296903795 20.676754832934954 20 22.500401923386097 24.752235823398188 31.0593106050641 21.688051648151617 21 23.01712260058382 25.431940308951752 30.946683478800814 20.604253611663616 22 22.948828841756452 25.453730535503677 29.220029469952742 22.377411152787133 23 21.285021035097763 26.134542248016178 30.573813728108462 22.00662298877759 24 21.197461527184856 27.69241057924357 29.80398096809725 21.306146925474327 25 21.88597953933158 26.449481884216837 29.237745101295765 22.426793475155822 26 21.85382566844399 26.833025302793356 30.115953236047943 21.197195792714712 27 21.996525078912065 26.87292976239352 29.143453653472505 21.987091505221905 28 21.079652578753734 27.617340591427496 30.450512933961 20.852493895857776 29 21.327095659537456 27.214487134687072 30.50197684301249 20.956440362762983 30 21.156582707860824 28.382434420054448 30.25652677075486 20.204456101329868 31 22.00352275329256 27.738249775343647 29.123257833741455 21.13496963762233 32 20.143691485823286 28.433189703852218 29.79990637288835 21.62321243743614 33 20.360132211756714 28.03427797508562 30.181722517408932 21.423867295748735 34 20.6784821069909 28.07524537256637 29.99464545042657 21.25162707001616 35 20.830127911287207 28.567474189432364 29.97865709313949 20.623740806140948 36 20.663468109427683 28.630187524386674 29.111964118760277 21.594380247425367 37 20.56089460395156 28.74777502742601 29.55299476104492 21.138335607577506 38 20.805060292936822 28.110410900782277 29.583111334328066 21.501417471952834 39 20.79726541514589 27.574911654360946 29.47278724013937 22.155035690353795 40 20.92610234408805 28.161564786285265 29.5806754350184 21.331657434608285 41 19.839824119212025 28.537401905227572 29.714649897050037 21.90812407851036 42 20.759796854855388 28.868374187793666 29.17011567864376 21.201713278707185 43 20.188512033121146 27.835508591416865 29.185616856068908 22.79036251939308 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 350.0 1 562.5 2 775.0 3 2708.5 4 4642.0 5 4642.0 6 7637.5 7 10633.0 8 11478.0 9 12323.0 10 16304.0 11 20285.0 12 20285.0 13 32212.5 14 44140.0 15 60204.5 16 76269.0 17 64766.5 18 53264.0 19 53264.0 20 53494.0 21 53724.0 22 42158.0 23 30592.0 24 33117.5 25 35643.0 26 35643.0 27 38448.5 28 41254.0 29 42791.0 30 44328.0 31 46360.0 32 48392.0 33 48392.0 34 52983.0 35 57574.0 36 66024.5 37 74475.0 38 83776.5 39 93078.0 40 93078.0 41 101269.0 42 109460.0 43 118672.0 44 127884.0 45 143644.0 46 159404.0 47 159404.0 48 183636.0 49 207868.0 50 204168.0 51 200468.0 52 177491.5 53 154515.0 54 154515.0 55 146308.5 56 138102.0 57 130961.5 58 123821.0 59 114292.5 60 104764.0 61 104764.0 62 89109.5 63 73455.0 64 63474.0 65 53493.0 66 45391.0 67 37289.0 68 37289.0 69 30979.5 70 24670.0 71 20891.5 72 17113.0 73 13142.0 74 9171.0 75 9171.0 76 7316.0 77 5461.0 78 4510.5 79 3560.0 80 2930.0 81 2300.0 82 2300.0 83 1946.5 84 1593.0 85 1316.0 86 1039.0 87 735.5 88 432.0 89 432.0 90 300.5 91 169.0 92 117.5 93 66.0 94 56.5 95 47.0 96 47.0 97 26.5 98 6.0 99 4.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2257893.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.175301368899305 #Duplication Level Percentage of deduplicated Percentage of total 1 85.45413070381218 45.44049153392525 2 7.656757354549802 8.143007596734439 3 2.4781598087479924 3.9533068401140516 4 1.2294354840015138 2.615024095015963 5 0.7244262494532477 1.9260792067108938 6 0.48538614433270044 1.5486332703107646 7 0.3179929189636254 1.1836558509346733 8 0.2457163145466562 1.0452831261818962 9 0.18618268020078121 0.891028811641135 >10 1.0456163206405518 10.175694700656113 >50 0.0880055741768785 3.2853327529524217 >100 0.07500199743278009 8.316639978967551 >500 0.00895819186947232 3.2373143593524563 >1k 0.0038155261666270924 3.9563891989306774 >5k 8.294622101363245E-5 0.23548675510692177 >10k+ 3.317848840545298E-4 4.046631922464814 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 33020 1.4624253673668326 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 22815 1.0104553227278708 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 20369 0.9021242370652639 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15542 0.6883408558332924 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 5339 0.23645938935104543 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4401 0.1949162338516484 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4220 0.18689991066892894 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 4216 0.18672275435549868 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4213 0.18658988712042598 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 3925 0.17383463255344697 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3784 0.16758987250503013 No Hit GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA 3547 0.15709336093428697 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 3121 0.1382262135539638 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAA 3053 0.1352145562256493 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 2459 0.10890684368125504 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 2417 0.10704670239023728 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.4289078357566104E-5 2 0.0 0.0 0.0 0.0 4.4289078357566104E-5 3 0.0 0.0 0.0 0.0 4.4289078357566104E-5 4 0.0 0.0 0.0 0.0 4.4289078357566104E-5 5 0.0 0.0 0.0 4.4289078357566104E-5 4.4289078357566104E-5 6 0.0 0.0 0.0 4.4289078357566104E-5 4.4289078357566104E-5 7 8.857815671513221E-5 0.0 0.0 4.4289078357566104E-5 4.4289078357566104E-5 8 8.857815671513221E-5 0.0 0.0 8.857815671513221E-5 4.4289078357566104E-5 9 8.857815671513221E-5 0.0 0.0 8.857815671513221E-5 4.4289078357566104E-5 10 8.857815671513221E-5 0.0 0.0 8.857815671513221E-5 4.4289078357566104E-5 11 8.857815671513221E-5 0.0 0.0 2.2144539178783052E-4 4.4289078357566104E-5 12 8.857815671513221E-5 0.0 0.0 2.2144539178783052E-4 4.4289078357566104E-5 13 8.857815671513221E-5 0.0 0.0 3.100235485029627E-4 4.4289078357566104E-5 14 1.328672350726983E-4 0.0 0.0 9.300706455088882E-4 4.4289078357566104E-5 15 1.328672350726983E-4 0.0 0.0 0.001727274055945078 4.4289078357566104E-5 16 1.328672350726983E-4 0.0 0.0 0.004606064149186875 4.4289078357566104E-5 17 1.328672350726983E-4 0.0 0.0 0.006953385302137878 4.4289078357566104E-5 18 1.328672350726983E-4 0.0 0.0 0.008326346731222426 4.4289078357566104E-5 19 1.328672350726983E-4 0.0 0.0 0.011780894843112583 4.4289078357566104E-5 20 1.328672350726983E-4 0.0 0.0 0.015102575719930041 4.4289078357566104E-5 21 1.328672350726983E-4 0.0 0.0 0.02294174258921924 4.4289078357566104E-5 22 1.328672350726983E-4 0.0 0.0 0.034191168492041034 4.4289078357566104E-5 23 1.328672350726983E-4 0.0 0.0 0.055538504260387894 8.857815671513221E-5 24 1.328672350726983E-4 0.0 0.0 0.08676230450247199 8.857815671513221E-5 25 1.328672350726983E-4 0.0 0.0 0.1017763020656869 8.857815671513221E-5 26 1.328672350726983E-4 0.0 0.0 0.1263567405541361 1.328672350726983E-4 27 1.328672350726983E-4 0.0 0.0 0.15793485342308072 1.328672350726983E-4 28 1.328672350726983E-4 0.0 0.0 0.22100250100425486 1.328672350726983E-4 29 1.328672350726983E-4 0.0 0.0 0.2915107137495001 1.328672350726983E-4 30 1.328672350726983E-4 0.0 0.0 0.4000632448038946 1.328672350726983E-4 31 1.328672350726983E-4 0.0 0.0 0.6696065756880419 1.328672350726983E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTCGC 60 9.2405785E-4 18.5 19 TAGTACT 150 2.5102054E-10 17.266666 4 AAGACGG 545 0.0 15.954128 5 GTATACG 75 0.0041060364 14.8 1 TACTAGT 100 1.0941057E-4 14.8 2 CAAGACG 575 0.0 14.478261 4 ACTATAC 180 3.3360266E-9 14.388889 3 CTCTATA 155 1.2116652E-7 14.32258 2 ACGGACC 635 0.0 13.692912 8 CGAACGT 205 1.4260877E-9 13.536585 4 GTTCTAG 110 2.4580056E-4 13.454545 1 TCTAGCG 320 0.0 13.296876 28 CTACTAG 140 9.567784E-6 13.214285 1 CTTATAC 1825 0.0 13.1780815 37 AGACGGA 635 0.0 13.110235 6 TAGACTC 170 3.7355858E-7 13.058824 5 TCTATAC 285 0.0 12.982456 3 CCGATAA 230 5.7661964E-10 12.869565 9 TACCGTC 425 0.0 12.623529 7 GACGGAC 675 0.0 12.607408 7 >>END_MODULE