SRR2727046.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727046.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4686387
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	53000	1.130935195919586	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	42022	0.8966822415647705	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	38364	0.8186263746463961	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28480	0.6077176298073548	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10378	0.22144991440100872	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9843	0.2100338704421978	No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7402	0.1579468362301278	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	7175	0.1531030194476043	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7163	0.15284695864852818	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6924	0.14774708106692852	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG	6336	0.13520010191219803	No Hit
GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA	6138	0.13097509872744184	No Hit
GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA	5631	0.12015652996647523	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTAGCG	565	15.061946	28
AAGACGG	1025	14.619512	5
ACGGACC	1070	14.523365	8
CAAGACG	1035	14.299518	4
CTTATAC	4005	14.042448	37
CGGACCA	1095	14.022832	9
CTAGCGG	615	13.837399	29
GACGGAC	1140	13.631578	7
TCTTATA	6240	13.430289	37
AGACGGA	1240	13.42742	6
TACGGAT	1100	13.118182	27
TCGTTAC	685	12.963504	23
TATACTG	570	12.657894	5
GTCCTAT	955	12.591622	1
GAGCGAA	1195	12.539748	16
CGCAATA	725	12.5034485	36
CGGTCCA	760	12.414474	10
ACGGATG	1195	12.384936	28
CATTACG	540	12.333334	24
CGTTACG	645	12.333334	24