##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727046.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4686387 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07735084618492 33.0 31.0 34.0 30.0 34.0 2 32.2326786072085 33.0 31.0 34.0 30.0 34.0 3 32.336839659208685 34.0 31.0 34.0 30.0 34.0 4 35.916151184270525 37.0 35.0 37.0 35.0 37.0 5 35.7028824124 37.0 35.0 37.0 33.0 37.0 6 35.74640421288297 37.0 35.0 37.0 35.0 37.0 7 35.70294664098377 37.0 35.0 37.0 33.0 37.0 8 35.72044690291263 37.0 35.0 37.0 33.0 37.0 9 37.47099460629265 39.0 37.0 39.0 35.0 39.0 10 37.31800318667664 39.0 37.0 39.0 34.0 39.0 11 37.39325689491713 39.0 37.0 39.0 34.0 39.0 12 37.325380725066026 39.0 37.0 39.0 34.0 39.0 13 37.35600516986754 39.0 37.0 39.0 34.0 39.0 14 38.53587806555455 40.0 38.0 41.0 34.0 41.0 15 38.43123753970809 40.0 38.0 41.0 34.0 41.0 16 38.371426858259895 40.0 38.0 41.0 34.0 41.0 17 38.439737691317426 40.0 38.0 41.0 34.0 41.0 18 38.45407944328968 40.0 38.0 41.0 34.0 41.0 19 38.51555814745986 40.0 38.0 41.0 34.0 41.0 20 38.4892470468188 40.0 38.0 41.0 34.0 41.0 21 38.38069497888245 40.0 38.0 41.0 34.0 41.0 22 38.33957716253481 40.0 38.0 41.0 34.0 41.0 23 38.235699271101595 40.0 38.0 41.0 34.0 41.0 24 38.14256270342163 40.0 38.0 41.0 33.0 41.0 25 38.09476874189007 40.0 37.0 41.0 33.0 41.0 26 37.867970357548366 40.0 37.0 41.0 33.0 41.0 27 37.74344500358165 40.0 37.0 41.0 33.0 41.0 28 37.62210077827546 40.0 37.0 41.0 33.0 41.0 29 37.47734555426174 39.0 36.0 41.0 32.0 41.0 30 37.354139126794266 39.0 36.0 41.0 32.0 41.0 31 37.223014445883365 39.0 36.0 41.0 32.0 41.0 32 37.01819994806233 39.0 35.0 41.0 31.0 41.0 33 36.820839166718415 39.0 35.0 40.0 31.0 41.0 34 36.69826563619266 39.0 35.0 40.0 31.0 41.0 35 36.54861815722859 39.0 35.0 40.0 30.0 41.0 36 36.30773813600968 39.0 35.0 40.0 30.0 41.0 37 36.19897908559408 39.0 35.0 40.0 30.0 41.0 38 36.074147098820475 39.0 35.0 40.0 30.0 41.0 39 35.86663500048118 39.0 35.0 40.0 28.0 41.0 40 35.66224193605863 38.0 35.0 40.0 27.0 41.0 41 35.481534708934625 38.0 35.0 40.0 26.0 41.0 42 35.163745119641206 38.0 35.0 40.0 24.0 41.0 43 33.93826395472674 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 2.0 9 15.0 10 46.0 11 43.0 12 56.0 13 33.0 14 38.0 15 65.0 16 118.0 17 176.0 18 332.0 19 533.0 20 1214.0 21 2272.0 22 4064.0 23 6823.0 24 11280.0 25 17501.0 26 26051.0 27 38006.0 28 52514.0 29 69559.0 30 87337.0 31 108647.0 32 136229.0 33 174027.0 34 230542.0 35 306537.0 36 447926.0 37 735582.0 38 1226220.0 39 1002597.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.76523449727903 18.270428797280296 12.378000365740174 23.586336339700498 2 17.487565580904864 22.70922141086513 35.43740625774184 24.36580675048817 3 20.997753706640104 25.703660410461193 29.280467020756074 24.018118862142625 4 14.515361194028578 15.567579032632176 33.333290656533485 36.58376911680576 5 13.903631945035697 38.90414940123383 32.28916007150071 14.903058582229765 6 33.22932997210858 33.618008926706224 17.023604751378834 16.129056349806365 7 27.60561601079894 32.07925423145805 22.138781965723275 18.176347792019737 8 28.346293210526575 32.893762294919306 20.91863091972558 17.84131357482854 9 28.74177911469966 13.403502527640162 20.48315685409677 37.371561503563406 10 17.94427135445707 27.349640565322495 31.637613368251493 23.068474711968943 11 34.293539991468904 22.563693523390192 21.403567396375927 21.73919908876497 12 21.80026958934463 27.257181278456088 29.80808029725245 21.134468834946837 13 29.94223481756842 19.505879476022788 26.981126398652094 23.5707593077567 14 22.702478476489457 21.51264929678236 27.46399305050991 28.320879176218266 15 25.92391537446651 26.745187710703362 24.58175135770904 22.749145557121082 16 22.652311898270458 25.981721099857953 27.78910491173691 23.576862090134682 17 22.812157852093733 26.865386917469685 27.067354872740985 23.2551003576956 18 22.726462838002924 24.209204233453193 29.712121512798667 23.352211415745224 19 23.03181534090121 25.473056322493214 29.98666136620813 21.508466970397453 20 22.90971701654174 24.55305120981259 29.907218503294757 22.63001327035091 21 23.682039063355205 25.122786487756986 29.945051486358253 21.250122962529556 22 23.591606924481482 24.919900981288997 28.487574756416826 23.00091733781269 23 22.04137217007473 25.600083817234896 29.65580947540184 22.70273453728853 24 21.858864835533215 26.785752008957008 29.194814683465108 22.16056847204467 25 22.570031028167328 25.793601766136685 28.563496783342902 23.072870422353084 26 22.387651724025353 26.351366201724268 29.257421548839226 22.003560525411153 27 22.845829847172247 26.259355021256248 28.388543242374137 22.50627188919737 28 21.724134178419323 26.910965739705233 29.392237559552807 21.972662522322633 29 21.926038118490855 26.642037885475528 29.676785122526162 21.75513887350746 30 22.004968859806073 27.375097276430647 29.450085961744087 21.16984790201919 31 22.63248852474198 26.780353393776483 28.52039321549842 22.066764865983114 32 21.115413643815586 27.417731399476825 28.93644933719729 22.530405619510297 33 21.18245889637369 26.840613035159066 29.403013451513928 22.573914616953317 34 21.800162897345015 26.954410721948484 29.412210301880748 21.833216078825757 35 21.836544869213746 27.17504977715242 29.427168520226775 21.561236833407058 36 21.268089895264733 27.423620797855573 28.899469890130714 22.40881941674898 37 21.34390523019119 27.30854280707078 29.282302123149456 22.06524983958858 38 21.409904901153062 26.686805848514005 29.36695155564404 22.536337694688893 39 21.338357246211206 26.39899351035243 29.449296440946938 22.813352802489423 40 21.515658011171507 26.62471110473804 29.706317468019606 22.153313416070844 41 20.344713315396273 27.16679181638221 29.855707605880603 22.632787262340905 42 21.17851129238793 27.317184859039596 29.513076918316816 21.991226930255653 43 20.38713405444322 26.366431112069915 29.456722204120144 23.789712629366715 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1007.0 1 1543.0 2 2079.0 3 7617.0 4 13155.0 5 13155.0 6 18762.5 7 24370.0 8 22921.0 9 21472.0 10 29047.5 11 36623.0 12 36623.0 13 56691.0 14 76759.0 15 97698.5 16 118638.0 17 102506.5 18 86375.0 19 86375.0 20 88034.0 21 89693.0 22 70546.0 23 51399.0 24 58037.0 25 64675.0 26 64675.0 27 71264.5 28 77854.0 29 82907.5 30 87961.0 31 93759.5 32 99558.0 33 99558.0 34 111437.5 35 123317.0 36 140673.0 37 158029.0 38 178380.5 39 198732.0 40 198732.0 41 218798.5 42 238865.0 43 256044.0 44 273223.0 45 304962.5 46 336702.0 47 336702.0 48 376877.0 49 417052.0 50 414471.0 51 411890.0 52 378150.0 53 344410.0 54 344410.0 55 326666.0 56 308922.0 57 293006.0 58 277090.0 59 255663.0 60 234236.0 61 234236.0 62 198640.5 63 163045.0 64 142640.5 65 122236.0 66 103597.0 67 84958.0 68 84958.0 69 69344.5 70 53731.0 71 45618.0 72 37505.0 73 28424.0 74 19343.0 75 19343.0 76 15374.5 77 11406.0 78 9570.5 79 7735.0 80 6301.0 81 4867.0 82 4867.0 83 4171.5 84 3476.0 85 2921.5 86 2367.0 87 1630.5 88 894.0 89 894.0 90 648.5 91 403.0 92 301.0 93 199.0 94 153.5 95 108.0 96 108.0 97 64.0 98 20.0 99 14.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4686387.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.70236335876605 #Duplication Level Percentage of deduplicated Percentage of total 1 82.93549136292847 39.562189443322175 2 8.865219797808479 8.45783872100773 3 2.8722119921736815 4.110339002822228 4 1.3931852682578878 2.658329195700709 5 0.8269495765012334 1.9723724588819769 6 0.5652926328039879 1.6179476744429606 7 0.38502307422709325 1.2856557411802971 8 0.3097762368876755 1.1821646889541668 9 0.22094952413806163 0.9485833035942239 >10 1.4171605841253476 12.549106053123607 >50 0.10958212870398652 3.6292792854139133 >100 0.07903937765408889 7.69196876973494 >500 0.013085890652668169 4.277043986815493 >1k 0.006453925347788896 5.198055967685064 >5k 3.5607863987800455E-4 1.2019996178506778 >10k+ 2.2254914992375286E-4 3.657126089469938 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 53000 1.130935195919586 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 42022 0.8966822415647705 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 38364 0.8186263746463961 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28480 0.6077176298073548 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10378 0.22144991440100872 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9843 0.2100338704421978 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7402 0.1579468362301278 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 7175 0.1531030194476043 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7163 0.15284695864852818 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6924 0.14774708106692852 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 6336 0.13520010191219803 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 6138 0.13097509872744184 No Hit GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA 5631 0.12015652996647523 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.1338399923011053E-5 2 0.0 0.0 0.0 2.1338399923011053E-5 4.2676799846022107E-5 3 0.0 0.0 0.0 2.1338399923011053E-5 4.2676799846022107E-5 4 0.0 0.0 0.0 2.1338399923011053E-5 4.2676799846022107E-5 5 0.0 2.1338399923011053E-5 0.0 2.1338399923011053E-5 4.2676799846022107E-5 6 0.0 2.1338399923011053E-5 0.0 2.1338399923011053E-5 6.401519976903316E-5 7 0.0 2.1338399923011053E-5 0.0 4.2676799846022107E-5 6.401519976903316E-5 8 2.1338399923011053E-5 2.1338399923011053E-5 0.0 6.401519976903316E-5 8.535359969204421E-5 9 2.1338399923011053E-5 2.1338399923011053E-5 0.0 1.0669199961505527E-4 1.0669199961505527E-4 10 4.2676799846022107E-5 2.1338399923011053E-5 0.0 1.4936879946107737E-4 1.0669199961505527E-4 11 4.2676799846022107E-5 2.1338399923011053E-5 0.0 3.4141439876817685E-4 1.0669199961505527E-4 12 6.401519976903316E-5 2.1338399923011053E-5 0.0 5.547983979982873E-4 1.0669199961505527E-4 13 6.401519976903316E-5 2.1338399923011053E-5 0.0 7.468439973053869E-4 1.2803039953806632E-4 14 8.535359969204421E-5 2.1338399923011053E-5 0.0 0.0013869959949957184 1.4936879946107737E-4 15 1.0669199961505527E-4 2.1338399923011053E-5 0.0 0.002368562391454227 1.4936879946107737E-4 16 1.0669199961505527E-4 2.1338399923011053E-5 0.0 0.00527058478098373 1.4936879946107737E-4 17 1.0669199961505527E-4 2.1338399923011053E-5 0.0 0.008236622370282266 1.4936879946107737E-4 18 1.0669199961505527E-4 2.1338399923011053E-5 0.0 0.009602279965354973 1.4936879946107737E-4 19 1.2803039953806632E-4 2.1338399923011053E-5 0.0 0.012653671154345554 1.4936879946107737E-4 20 1.2803039953806632E-4 2.1338399923011053E-5 0.0 0.015897107942643235 1.4936879946107737E-4 21 1.2803039953806632E-4 2.1338399923011053E-5 0.0 0.022618703918391717 1.7070719938408843E-4 22 1.2803039953806632E-4 2.1338399923011053E-5 0.0 0.03298916628097509 1.7070719938408843E-4 23 1.2803039953806632E-4 2.1338399923011053E-5 0.0 0.051297513414918575 2.3472239915312159E-4 24 1.2803039953806632E-4 2.1338399923011053E-5 0.0 0.07993364611159941 2.5606079907613264E-4 25 1.2803039953806632E-4 2.1338399923011053E-5 0.0 0.09220322606733077 2.5606079907613264E-4 26 1.2803039953806632E-4 2.1338399923011053E-5 0.0 0.1113864475981177 2.7739919899914367E-4 27 1.2803039953806632E-4 4.2676799846022107E-5 0.0 0.14458899787832288 2.7739919899914367E-4 28 1.2803039953806632E-4 4.2676799846022107E-5 0.0 0.21707554241679144 2.7739919899914367E-4 29 1.2803039953806632E-4 4.2676799846022107E-5 0.0 0.30294126370698793 3.2007599884516577E-4 30 1.2803039953806632E-4 4.2676799846022107E-5 0.0 0.43624224802603795 3.2007599884516577E-4 31 1.2803039953806632E-4 4.2676799846022107E-5 0.0 0.7635733028450276 3.2007599884516577E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 565 0.0 15.061946 28 AAGACGG 1025 0.0 14.619512 5 ACGGACC 1070 0.0 14.523365 8 CAAGACG 1035 0.0 14.299518 4 CTTATAC 4005 0.0 14.042448 37 CGGACCA 1095 0.0 14.022832 9 CTAGCGG 615 0.0 13.837399 29 GACGGAC 1140 0.0 13.631578 7 TCTTATA 6240 0.0 13.430289 37 AGACGGA 1240 0.0 13.42742 6 TACGGAT 1100 0.0 13.118182 27 TCGTTAC 685 0.0 12.963504 23 TATACTG 570 0.0 12.657894 5 GTCCTAT 955 0.0 12.591622 1 GAGCGAA 1195 0.0 12.539748 16 CGCAATA 725 0.0 12.5034485 36 CGGTCCA 760 0.0 12.414474 10 ACGGATG 1195 0.0 12.384936 28 CATTACG 540 0.0 12.333334 24 CGTTACG 645 0.0 12.333334 24 >>END_MODULE