##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2558173_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 14014595 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.642345426321633 31.0 30.0 34.0 26.0 34.0 2 30.77027877009646 31.0 30.0 34.0 27.0 34.0 3 30.99259536219206 31.0 31.0 34.0 27.0 34.0 4 34.630681015041816 37.0 35.0 37.0 31.0 37.0 5 34.24013166274159 35.0 35.0 37.0 30.0 37.0 6 34.274343354196105 37.0 35.0 37.0 30.0 37.0 7 34.133979540614625 36.0 35.0 37.0 29.0 37.0 8 34.120104933464006 37.0 35.0 37.0 29.0 37.0 9 35.53685019081893 38.0 35.0 39.0 29.0 39.0 10 35.45041958044453 38.0 35.0 39.0 28.0 39.0 11 35.52906045447621 38.0 35.0 39.0 29.0 39.0 12 35.38948803015713 38.0 35.0 39.0 28.0 39.0 13 35.418049897267814 38.0 35.0 39.0 28.0 39.0 14 36.33794997286757 39.0 36.0 41.0 28.0 41.0 15 36.319055384761384 39.0 36.0 41.0 28.0 41.0 16 36.30262537019443 39.0 36.0 41.0 27.0 41.0 17 36.25633997985671 39.0 36.0 41.0 27.0 41.0 18 36.24506780253015 39.0 36.0 41.0 27.0 41.0 19 36.2870183547937 39.0 36.0 41.0 27.0 41.0 20 36.254398646553824 39.0 36.0 41.0 27.0 41.0 21 36.18698913525507 39.0 35.0 41.0 27.0 41.0 22 36.13332272534454 39.0 35.0 40.0 27.0 41.0 23 35.88376538886782 39.0 35.0 40.0 27.0 41.0 24 35.851607199494524 39.0 34.0 40.0 27.0 41.0 25 35.84214299449966 39.0 35.0 40.0 27.0 41.0 26 35.77966826725995 39.0 34.0 40.0 27.0 41.0 27 35.576620301906694 39.0 34.0 40.0 26.0 41.0 28 35.56076861300666 39.0 34.0 40.0 26.0 41.0 29 35.52763893640879 38.0 34.0 40.0 26.0 41.0 30 35.42237360408917 38.0 34.0 40.0 25.0 41.0 31 35.32771464319875 38.0 34.0 40.0 25.0 41.0 32 35.20380745929511 38.0 34.0 40.0 25.0 41.0 33 35.063254557124196 38.0 34.0 40.0 25.0 41.0 34 34.959780214840315 38.0 33.0 40.0 25.0 41.0 35 34.87449990527732 38.0 33.0 40.0 24.0 41.0 36 34.70548167820761 38.0 33.0 40.0 24.0 41.0 37 34.67026218024852 38.0 33.0 40.0 24.0 41.0 38 34.58796847143995 38.0 33.0 40.0 24.0 41.0 39 34.529241908167876 38.0 33.0 40.0 23.0 41.0 40 34.394919225279075 38.0 33.0 40.0 23.0 41.0 41 34.26218281727014 38.0 32.0 40.0 23.0 41.0 42 34.182788443048125 38.0 32.0 40.0 22.0 41.0 43 34.083501806509574 38.0 32.0 40.0 22.0 41.0 44 33.908008258533336 37.0 32.0 40.0 21.0 41.0 45 33.80588436554891 37.0 31.0 40.0 21.0 41.0 46 33.590123724588544 37.0 31.0 40.0 20.0 41.0 47 33.44331755573386 37.0 31.0 40.0 20.0 41.0 48 33.30855854200567 37.0 31.0 40.0 20.0 41.0 49 33.212930591287154 37.0 31.0 40.0 19.0 41.0 50 31.940377228168206 35.0 28.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 5.0 4 30.0 5 82.0 6 190.0 7 306.0 8 633.0 9 1713.0 10 4493.0 11 11198.0 12 24415.0 13 41776.0 14 59633.0 15 72143.0 16 81591.0 17 87078.0 18 92162.0 19 96130.0 20 101034.0 21 106075.0 22 113506.0 23 122802.0 24 135771.0 25 151394.0 26 172576.0 27 196428.0 28 226213.0 29 263937.0 30 317024.0 31 387570.0 32 486234.0 33 622827.0 34 816088.0 35 1077340.0 36 1434262.0 37 1903378.0 38 2366323.0 39 2440235.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.08700256799431 20.108043645766692 13.578967716826481 24.225986069412514 2 15.400054843037669 22.280430019078043 37.12177230777662 25.19774283010767 3 17.071454989448544 27.808509999105873 29.601169655158238 25.51886535628734 4 12.506163756469716 18.34033498009401 36.65647164101141 32.497029622424876 5 13.661038233824351 38.33805767324962 33.53658057895919 14.464323513966837 6 30.799273561569684 37.65107486849649 17.816106639471382 13.733544930462449 7 26.981855854427184 32.43627595853072 22.900616752073116 17.681251434968974 8 27.40959609445221 32.67755041619353 20.56046963301409 19.352383856340158 9 27.327516323850233 14.45802162200896 20.272200015216512 37.9422620389243 10 17.066893789880297 27.68556526464797 30.95942622465361 24.288114720818125 11 33.68511749011907 23.72053827606949 23.12609842611548 19.468245807695958 12 23.42327534617261 25.718436405692923 29.372202062101422 21.486086186033052 13 28.401968767547892 21.329399775372735 25.846328777158668 24.42230267992071 14 23.69533938709807 20.728661164394637 26.78033020768467 28.79566924082262 15 24.586304324339523 27.785098463902326 23.946937973371796 23.681659238386356 16 23.62674963827655 27.295234841225597 25.414772417505787 23.663243102992066 17 22.472991299725994 27.28052853044182 26.8168126893435 23.429667480488682 18 23.27081828909405 25.848188203736743 28.720438292842417 22.160555214326795 19 23.70263605836655 26.19034432553376 28.460259287939504 21.646760328160184 20 24.443061551291127 25.195690721584736 27.77807595866185 22.58317176846229 21 24.981614419548098 25.629377816541027 27.135625059774547 22.253382704136328 22 24.445462117222057 25.406656117669872 27.188710436890208 22.959171328217863 23 22.847748341506428 25.763724995192927 27.725310382720064 23.66321628058058 24 23.249520826137072 26.58555313734942 27.35650713858591 22.8084188979276 25 23.53678017185319 25.132511867069972 27.328567612639194 24.00214034843765 26 23.54798178061018 25.90116260811125 27.474382194926 23.07647341635257 27 23.889064946818607 25.63773416299443 27.23251209446602 23.240688795720935 28 23.15946339584521 25.470923424780313 28.28878335252537 23.080829826849108 29 23.195286100860905 25.30867117987415 28.60440586841138 22.891636850853573 30 23.461157096743232 25.83457945892638 28.127343509995946 22.576919934334445 31 23.915415948269096 25.26891551872944 27.597936896356895 23.217731636644572 32 23.183098418628184 25.70180681912436 27.764131464675142 23.350963297572317 33 23.16121332569528 25.822861162591686 27.61146156122726 23.404463950485777 34 23.107561476117606 25.886821202242132 27.92439551493447 23.08122180670579 35 24.010957074088704 25.85746740584456 27.86780576277585 22.263769757290888 36 23.410012846168048 25.890841183868478 27.049622489935764 23.64952348002771 37 23.973189851106266 26.093146892070774 27.317807661979472 22.615855594843488 38 23.488340427572606 25.506448471530767 27.533826625955253 23.47138447494137 39 23.875286789636924 25.297492167596136 27.474727360257745 23.352493682509195 40 23.875063811298546 25.75462190775247 27.49357212455566 22.87674215639333 41 22.74838794390416 26.127204713283795 27.65172166734698 23.472685675465062 42 24.369406543767518 26.180900627988613 27.177984915598774 22.2717079126451 43 24.286427364699122 25.012311188892276 27.218841595798388 23.48241985061021 44 23.57456195136408 26.020376625966612 27.210100461285652 23.194960961383654 45 24.3022901639363 25.71569407159667 26.72773551641019 23.254280248056848 46 23.2648103854464 25.890517145652193 27.65461659605844 23.190055872842965 47 23.789117768140784 26.011190609073896 27.2131795400631 22.986512082722218 48 24.70445945672998 26.37259744728339 26.140896944449622 22.78204615153701 49 23.755438621705135 26.422522792598045 26.9600571052157 22.86198148048112 50 24.309100074587732 26.42430315560634 25.923661895202095 23.34293487460383 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 4801.0 1 3944.0 2 3087.0 3 5736.0 4 8385.0 5 9170.5 6 9956.0 7 7772.5 8 5589.0 9 8242.0 10 10895.0 11 17479.0 12 24063.0 13 47925.5 14 71788.0 15 90752.5 16 109717.0 17 104153.0 18 98589.0 19 90314.0 20 82039.0 21 89802.5 22 97566.0 23 111588.5 24 125611.0 25 148550.5 26 171490.0 27 195681.5 28 219873.0 29 252993.5 30 286114.0 31 323009.5 32 359905.0 33 398094.5 34 436284.0 35 482805.5 36 529327.0 37 579892.5 38 630458.0 39 675314.0 40 720170.0 41 765283.0 42 810396.0 43 822876.0 44 835356.0 45 896480.5 46 957605.0 47 1020882.0 48 1084159.0 49 1081876.0 50 1079593.0 51 975247.5 52 870902.0 53 822399.0 54 773896.0 55 764814.5 56 755733.0 57 718050.0 58 680367.0 59 632770.5 60 585174.0 61 518685.0 62 452196.0 63 392444.0 64 332692.0 65 279891.5 66 227091.0 67 198991.5 68 170892.0 69 149678.5 70 128465.0 71 103723.5 72 78982.0 73 71104.0 74 63226.0 75 54674.0 76 46122.0 77 35813.5 78 25505.0 79 20370.5 80 15236.0 81 13390.0 82 11544.0 83 9897.5 84 8251.0 85 7155.5 86 6060.0 87 5055.0 88 4050.0 89 2977.0 90 1904.0 91 1595.5 92 1287.0 93 1092.5 94 898.0 95 746.0 96 594.0 97 514.0 98 434.0 99 356.0 100 278.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04279110455921131 2 3.853125973315675E-4 3 0.006364793274439967 4 0.0087408876246513 5 0.019700890393193667 6 0.030846414041932713 7 0.02117792201629801 8 0.029726153342283526 9 0.024981100060329966 10 0.0033465112620093555 11 0.001605469155548198 12 0.022547922362365806 13 0.008262814587221393 14 0.012251513511450028 15 0.007370887278583505 16 0.008041616614679198 17 0.012151617652882583 18 0.022412349411452846 19 0.02244089108532926 20 0.026479537938841616 21 0.025794537765807715 22 0.03151000795955931 23 0.02846318427325228 24 0.03987271840534814 25 0.04039360395359266 26 0.028734330175078194 27 0.028934121892213085 28 0.03789620748940658 29 0.0075492727403110825 30 0.0082770854241596 31 0.030304122238280877 32 0.03648339463252417 33 0.016397191641998928 34 0.010781617306814787 35 0.012344273951548369 36 0.01324333667865536 37 0.008883595994033364 38 0.01296505535836034 39 0.02775677784481107 40 0.0183951088133478 41 0.010239325503162953 42 0.01597620195232185 43 0.006564584991574855 44 0.03297276874572544 45 0.016575577103726508 46 0.014720368301759702 47 0.008833648064749641 48 0.024288964468826963 49 0.008305627098036011 50 0.011181200741084562 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1.4014595E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.84441133891896 #Duplication Level Percentage of deduplicated Percentage of total 1 71.17119226387291 24.087471064598013 2 11.557521793217077 7.823150432563178 3 5.719021242076382 5.806707221185448 4 3.2721197543211566 4.429718676617906 5 2.0491710742382576 3.4676494370167004 6 1.3371201446558825 2.7152426511173102 7 0.9260645721291215 2.193947721387658 8 0.6654061795830106 1.801622435941279 9 0.4947059340380612 1.5068728011049426 >10 2.4761919409884854 14.636500511194736 >50 0.16832449210174824 3.971863864109953 >100 0.1299722023613451 9.04604416450817 >500 0.018150751585944383 4.253351171594476 >1k 0.013619413224192082 8.965450756297669 >5k 0.0010428247108763464 2.4391466623548204 >10k+ 3.754168959154847E-4 2.8552604284077296 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 58426 0.4168939594758179 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 41943 0.29928085684959144 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37512 0.26766381761299557 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 30583 0.2182225030405802 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29195 0.20831854220546508 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 29181 0.20821864634689766 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 23584 0.1682817091753276 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 17354 0.12382805211281524 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 17073 0.12182299952299729 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 16982 0.1211736764423089 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 14907 0.10636768311891995 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 14874 0.10613221430943955 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG 14804 0.10563273501660232 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.281251081461862E-4 0.0 0.0 0.0 0.0 2 4.281251081461862E-4 7.135418469103103E-6 0.0 0.0 0.0 3 4.495313635534955E-4 7.135418469103103E-6 0.0 0.0 0.0 4 4.495313635534955E-4 7.135418469103103E-6 0.0 0.0 0.0 5 4.495313635534955E-4 7.135418469103103E-6 0.0 7.135418469103103E-6 0.0 6 4.495313635534955E-4 7.135418469103103E-6 0.0 1.4270836938206206E-5 2.140625540730931E-5 7 4.495313635534955E-4 7.135418469103103E-6 0.0 1.4270836938206206E-5 3.5677092345515516E-5 8 4.495313635534955E-4 7.135418469103103E-6 0.0 1.4270836938206206E-5 4.281251081461862E-5 9 4.780730374299079E-4 7.135418469103103E-6 0.0 1.4270836938206206E-5 4.281251081461862E-5 10 4.994792928372172E-4 7.135418469103103E-6 0.0 3.5677092345515516E-5 6.421876622192792E-5 11 4.994792928372172E-4 7.135418469103103E-6 0.0 4.994792928372172E-5 6.421876622192792E-5 12 4.994792928372172E-4 7.135418469103103E-6 0.0 5.708334775282482E-5 6.421876622192792E-5 13 5.066147113063203E-4 7.135418469103103E-6 0.0 5.708334775282482E-5 6.421876622192792E-5 14 5.137501297754234E-4 1.4270836938206206E-5 0.0 7.848960316013413E-5 6.421876622192792E-5 15 5.137501297754234E-4 1.4270836938206206E-5 0.0 1.0703127703654655E-4 7.848960316013413E-5 16 5.208855482445265E-4 1.4270836938206206E-5 0.0 1.4270836938206206E-4 9.276044009834034E-5 17 5.208855482445265E-4 1.4270836938206206E-5 0.0 1.5697920632026826E-4 9.276044009834034E-5 18 5.208855482445265E-4 1.4270836938206206E-5 0.0 1.6411462478937137E-4 1.0703127703654655E-4 19 5.280209667136296E-4 1.4270836938206206E-5 0.0 2.0692713560398998E-4 1.0703127703654655E-4 20 5.280209667136296E-4 1.4270836938206206E-5 0.0 2.568750648877117E-4 1.2843753244385584E-4 21 5.422918036518358E-4 1.4270836938206206E-5 0.0 3.9958343426977375E-4 1.3557295091295895E-4 22 5.636980590591451E-4 1.4270836938206206E-5 0.0 5.422918036518358E-4 1.3557295091295895E-4 23 5.708334775282483E-4 1.4270836938206206E-5 7.135418469103103E-6 7.706251946631352E-4 1.3557295091295895E-4 24 5.708334775282483E-4 1.4270836938206206E-5 7.135418469103103E-6 0.0010845836073036716 1.3557295091295895E-4 25 5.708334775282483E-4 1.4270836938206206E-5 7.135418469103103E-6 0.001255833650562146 1.3557295091295895E-4 26 6.065105698737637E-4 1.4270836938206206E-5 7.135418469103103E-6 0.0014841670415734454 1.3557295091295895E-4 27 6.27916825281073E-4 1.4270836938206206E-5 7.135418469103103E-6 0.0017481775249302601 1.6411462478937137E-4 28 6.350522437501762E-4 1.4270836938206206E-5 7.135418469103103E-6 0.002697188181320973 1.6411462478937137E-4 29 6.350522437501762E-4 1.4270836938206206E-5 7.135418469103103E-6 0.00411713645667249 1.6411462478937137E-4 30 6.350522437501762E-4 1.4270836938206206E-5 7.135418469103103E-6 0.006792918382586154 1.6411462478937137E-4 31 6.421876622192792E-4 1.4270836938206206E-5 7.135418469103103E-6 0.009761252465733044 1.7125004325847448E-4 32 6.493230806883823E-4 1.4270836938206206E-5 7.135418469103103E-6 0.012715315711941729 1.7125004325847448E-4 33 6.493230806883823E-4 1.4270836938206206E-5 7.135418469103103E-6 0.015997608207729157 1.7125004325847448E-4 34 6.707293360956917E-4 1.4270836938206206E-5 7.135418469103103E-6 0.019922088365735863 1.7125004325847448E-4 35 6.778647545647948E-4 1.4270836938206206E-5 7.135418469103103E-6 0.0246100582999366 1.7125004325847448E-4 36 6.778647545647948E-4 1.4270836938206206E-5 7.135418469103103E-6 0.030247038890528054 1.7125004325847448E-4 37 6.992710099721041E-4 1.4270836938206206E-5 7.135418469103103E-6 0.038210165902047115 1.7125004325847448E-4 38 7.135418469103103E-4 1.4270836938206206E-5 7.135418469103103E-6 0.04746480365647384 1.7838546172757757E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATGCGA 2140 0.0 19.02017 20 TGCGACG 2090 0.0 18.529873 22 CAATGCG 2165 0.0 18.088453 19 CGACGAG 2215 0.0 17.981712 24 CGACGAA 2600 0.0 17.599106 38 GTACTAG 2665 0.0 17.423908 1 CATTGCG 2135 0.0 17.414316 29 TCGACGA 2545 0.0 17.28644 37 TAGGTCG 2120 0.0 17.020494 21 GCTCGTC 2175 0.0 16.891214 39 GTCGACG 2675 0.0 16.446352 36 CGTCATT 2280 0.0 16.407185 26 AGTCGAC 2730 0.0 16.034382 35 AGGTCGT 2255 0.0 15.807912 22 CAATTCG 2920 0.0 15.52059 15 ACAACGA 2920 0.0 15.370178 44 CGAACAA 2960 0.0 15.309703 41 GTCGTCA 2300 0.0 15.307995 24 TCAGCGC 2430 0.0 15.300725 44 GACGAAC 2955 0.0 15.2616005 39 >>END_MODULE