##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2558153_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10089206 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.867926970665483 33.0 32.0 34.0 27.0 34.0 2 31.929466798477502 33.0 32.0 34.0 27.0 34.0 3 31.92866376204431 33.0 32.0 34.0 27.0 34.0 4 31.8291707989707 33.0 32.0 34.0 28.0 34.0 5 31.88875041306521 33.0 32.0 34.0 28.0 34.0 6 35.356436770148214 38.0 36.0 38.0 29.0 38.0 7 35.40584838886232 38.0 37.0 38.0 29.0 38.0 8 35.45001341037144 38.0 37.0 38.0 29.0 38.0 9 35.60479228989873 38.0 37.0 38.0 29.0 38.0 10 35.565793978237735 38.0 37.0 38.0 29.0 38.0 11 35.61232172283924 38.0 37.0 38.0 29.0 38.0 12 35.5198818420399 38.0 37.0 38.0 29.0 38.0 13 35.57148768693988 38.0 37.0 38.0 29.0 38.0 14 35.576821506072925 38.0 37.0 38.0 29.0 38.0 15 35.566830432444334 38.0 37.0 38.0 29.0 38.0 16 35.5178789094008 38.0 37.0 38.0 29.0 38.0 17 35.49136730878525 38.0 37.0 38.0 29.0 38.0 18 35.49471167503171 38.0 37.0 38.0 28.0 38.0 19 35.50916791668244 38.0 37.0 38.0 28.0 38.0 20 35.440999717916355 38.0 37.0 38.0 28.0 38.0 21 35.45211436856379 38.0 37.0 38.0 28.0 38.0 22 35.496844647636294 38.0 37.0 38.0 28.0 38.0 23 35.49877433367898 38.0 37.0 38.0 28.0 38.0 24 35.495187431003 38.0 37.0 38.0 28.0 38.0 25 35.50348144343569 38.0 37.0 38.0 28.0 38.0 26 35.50594913018924 38.0 37.0 38.0 28.0 38.0 27 35.5167413570503 38.0 37.0 38.0 28.0 38.0 28 35.52586863624352 38.0 37.0 38.0 29.0 38.0 29 35.49279388288831 38.0 37.0 38.0 28.0 38.0 30 35.49955239292368 38.0 37.0 38.0 28.0 38.0 31 35.53822045064795 38.0 37.0 38.0 29.0 38.0 32 35.54899077291117 38.0 37.0 38.0 29.0 38.0 33 35.526865939698325 38.0 37.0 38.0 29.0 38.0 34 35.504305988003416 38.0 37.0 38.0 28.0 38.0 35 35.516181451741595 38.0 37.0 38.0 29.0 38.0 36 35.4943959911216 38.0 37.0 38.0 28.0 38.0 37 35.49131834556654 38.0 37.0 38.0 28.0 38.0 38 35.490723848834094 38.0 37.0 38.0 28.0 38.0 39 35.5045277101092 38.0 37.0 38.0 28.0 38.0 40 35.51213197549936 38.0 37.0 38.0 28.0 38.0 41 35.51057199149269 38.0 37.0 38.0 28.0 38.0 42 35.425228803931645 38.0 37.0 38.0 28.0 38.0 43 35.46683386185196 38.0 37.0 38.0 28.0 38.0 44 35.45717115895939 38.0 37.0 38.0 28.0 38.0 45 35.479754501989554 38.0 37.0 38.0 28.0 38.0 46 35.44657220796166 38.0 37.0 38.0 28.0 38.0 47 35.403877767982934 38.0 37.0 38.0 28.0 38.0 48 35.37943203855685 38.0 37.0 38.0 28.0 38.0 49 35.29866998453595 38.0 37.0 38.0 27.0 38.0 50 35.014301224496755 38.0 36.0 38.0 26.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 14.0 4 484.0 5 1408.0 6 2124.0 7 1066.0 8 266.0 9 159.0 10 187.0 11 155.0 12 137.0 13 125.0 14 134.0 15 191.0 16 496.0 17 1654.0 18 8097.0 19 26486.0 20 49032.0 21 66766.0 22 79892.0 23 91856.0 24 104317.0 25 117062.0 26 131334.0 27 147793.0 28 167179.0 29 189685.0 30 216647.0 31 247506.0 32 291158.0 33 354990.0 34 456475.0 35 659643.0 36 1323554.0 37 5351134.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.10641288476937 19.817715318388363 13.948650316938158 24.12722147990411 2 14.773055481273751 21.552558248884996 39.60974728833963 24.064638981501616 3 17.513340494782245 27.301851107014762 30.908874295955503 24.27593410224749 4 12.496309835436008 17.889352757526893 37.54407627721329 32.070261129823805 5 13.220472725848847 38.09002380630206 34.70904317302369 13.980460294825415 6 29.98683826840411 37.04116934100093 18.956196328997667 14.0157960615973 7 25.53483854765293 32.58470351636781 23.96335171176504 17.917106224214223 8 25.999598273070163 33.63454256445609 21.39458759754897 18.971271564924773 9 26.384722024141183 15.420901661374845 20.648211310012027 37.54616500447195 10 16.3705881326034 28.161410131176655 32.26373561845694 23.204266117763005 11 32.51992273415939 23.843226716722498 23.830362301411167 19.806488247706948 12 22.517751071411922 26.27190307156268 29.88225130895245 21.328094548072947 13 27.7158397921616 21.676260472090018 26.82751553585469 23.78038419989369 14 22.867023074106914 21.38891977480054 26.840795099577885 28.903262051514663 15 24.645484188221868 27.421883337479137 25.091118418834093 22.841514055464902 16 23.32555025806543 27.658482584984746 25.870478003017816 23.14548915393201 17 22.4546560045706 27.32862717247481 26.980565017030656 23.236151805923928 18 22.467895099389885 26.25966400759312 29.22429822361613 22.048142669400868 19 23.249525864180843 26.95662230026241 29.0656910937447 20.728160741812047 20 24.329519054072495 24.966684731034 29.082732157536096 21.621064057357408 21 23.736992092429972 26.38608607269323 27.211595957676465 22.665325877200335 22 23.320045487492578 26.444985055512138 27.096544693980384 23.138424763014903 23 21.838114384030945 26.941276961374243 27.564456342485062 23.65615231210975 24 23.136035402548277 27.601987128690286 27.114616940182824 22.14736052857861 25 23.40868942177143 25.50073162165703 27.20222185260112 23.888357103970414 26 23.079785332367397 25.987675900072343 27.537307253090322 23.395231514469934 27 23.393584682721638 25.582960243868257 27.328169007519378 23.695286065890723 28 22.220721500652814 26.233568338397774 28.271293701987236 23.274416458962175 29 22.80062893936357 25.985137821252565 28.5919155325667 22.622317706817178 30 22.399500242133442 27.08722942716177 28.108662625059715 22.404607705645077 31 24.05849877101922 25.85425668481443 27.18084583074816 22.906398713418184 32 21.97447930865585 26.550485979249004 27.824457803569558 23.650576908525583 33 22.881136985501158 26.41306213870296 27.38036900535885 23.325431870437033 34 21.953759937081063 26.684591555036963 28.015678161307132 23.34597034657484 35 23.233196018310654 26.728495619457377 27.831270632586357 22.207037729645617 36 23.03495855476105 26.767241610143216 27.059800904970192 23.137998930125534 37 23.928632457313846 26.281873845775756 27.20500530046848 22.58448839644192 38 23.60555900779755 26.31500746626542 27.222474872334544 22.85695865360248 39 23.687544086410554 25.59303908803317 27.585328280604198 23.13408854495207 40 23.397086365311537 26.237876219518725 27.23973319252974 23.125304222639993 41 22.08256953624254 26.983947341718313 27.725375646328317 23.208107475710833 42 24.252624053869287 26.550423558906438 27.102979665225163 22.09397272199911 43 23.59390265719464 25.258412743998633 27.120981750256945 24.026702848549782 44 22.74482500066947 26.172132017404227 27.706476795194895 23.376566186731413 45 24.272086616631988 25.70097951261292 27.171497481579 22.85543638917609 46 22.588041734000807 26.505384567118828 28.36412902819078 22.542444670689584 47 23.425114522030924 26.085398030908035 27.454596875809457 23.03489057125158 48 23.941576055033476 26.735719900383632 27.246530889908165 22.07617315467473 49 23.016438463277257 26.496387173827056 28.735398710778025 21.751775652117654 50 23.613962754054498 26.62298147377357 26.792049633241245 22.97100613893069 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 747.0 1 1020.5 2 1294.0 3 3943.5 4 6593.0 5 7514.0 6 8435.0 7 7415.0 8 6395.0 9 8206.0 10 10017.0 11 13598.0 12 17179.0 13 31654.5 14 46130.0 15 59371.5 16 72613.0 17 69347.0 18 66081.0 19 63924.5 20 61768.0 21 71346.0 22 80924.0 23 95889.0 24 110854.0 25 124716.0 26 138578.0 27 145374.0 28 152170.0 29 176598.0 30 201026.0 31 261899.5 32 322773.0 33 341332.0 34 359891.0 35 387883.0 36 415875.0 37 441011.5 38 466148.0 39 501094.5 40 536041.0 41 571514.0 42 606987.0 43 600909.0 44 594831.0 45 641476.5 46 688122.0 47 753872.5 48 819623.0 49 833525.0 50 847427.0 51 796585.0 52 745743.0 53 627574.0 54 509405.0 55 492058.0 56 474711.0 57 448218.5 58 421726.0 59 390951.5 60 360177.0 61 310677.5 62 261178.0 63 230183.0 64 199188.0 65 168604.0 66 138020.0 67 123563.5 68 109107.0 69 92944.5 70 76782.0 71 62495.5 72 48209.0 73 44401.5 74 40594.0 75 31342.5 76 22091.0 77 18549.5 78 15008.0 79 12234.5 80 9461.0 81 8120.0 82 6779.0 83 6391.0 84 6003.0 85 4679.5 86 3356.0 87 3140.5 88 2925.0 89 1529.0 90 133.0 91 103.5 92 74.0 93 41.0 94 8.0 95 5.0 96 2.0 97 2.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04391822309902286 2 0.0 3 0.0 4 0.015660300721384815 5 0.015273748994717722 6 0.06884585367768285 7 0.07035241425341103 8 0.0766264461247 9 0.06295837353306097 10 0.07467386432589443 11 0.0706794964836678 12 0.06656618964862052 13 0.07460448324674905 14 0.07234464238315681 15 0.06662565914503084 16 0.07010462468503467 17 0.07320695008110649 18 0.0842682764134264 19 0.06593184835357707 20 0.0668238907997319 21 0.0653074186412687 22 0.0550588420932232 23 0.057021335474763825 24 0.06260155655459904 25 0.0674879668429805 26 0.05660504899989157 27 0.060034456626220145 28 0.051223059574757424 29 0.0677456679940919 30 0.05870630453972295 31 0.060004721878014984 32 0.05495972626587266 33 0.0620762426696412 34 0.06334492525972807 35 0.06493077849733665 36 0.057288948208610274 37 0.06080756007955433 38 0.07127419144777102 39 0.06674459813785148 40 0.06075800216587906 41 0.07383137979341486 42 0.06372156540366011 43 0.052908028639716546 44 0.06537679972041407 45 0.015224191081042454 46 0.008295994749239931 47 0.013965420073690636 48 0.020903527988228213 49 0.11398320145311733 50 0.009584500504796908 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1.0089206E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.532277058946555 #Duplication Level Percentage of deduplicated Percentage of total 1 69.50170352405502 21.220452680652098 2 14.783961436185322 9.027760131967835 3 6.055022753709598 5.546208969434609 4 3.061664297099811 3.7391833032214516 5 1.7594504245053182 2.686001391623875 6 1.078131689891715 1.9750689277082456 7 0.6970500588987928 1.4897767865577072 8 0.4962780722051342 1.2121999679077633 9 0.3468540710169598 0.9531220135782007 >10 1.8470416615349594 10.33798154901052 >50 0.16971119121212086 3.6330980120554828 >100 0.15130708093793332 9.849200694029477 >500 0.02542305201805929 5.422833269156744 >1k 0.02375735469657501 14.584103878568419 >5k 0.0018274888127534736 3.6524576052568993 >10k+ 8.158432199792293E-4 4.670550819270912 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 47210 0.46792582092188423 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 38828 0.3848469344366643 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37753 0.3741919829964816 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 28318 0.2806761998912501 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 25486 0.2526065975855781 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23108 0.22903685384162045 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 20728 0.2054472869321927 No Hit GTTCTACAGCACACTACCAGAAGACAGCAGAAATGAAAAGCATTTACTTT 19384 0.19212611973628055 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18824 0.18657563340465047 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG 17897 0.1773875962092557 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 16679 0.16531528843796034 No Hit GTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATCAACCAGTTTA 15267 0.15132013361606453 No Hit GTTTATAAAGTCCCTGGCGGCAAGATTATCAAGAATGGTGTTCATCTCAT 15112 0.1497838382921312 No Hit CTCTTCACCTGCTCTGTTCTACAGCACACTACCAGAAGACAGCAGAAATG 14751 0.14620575692477683 No Hit GAATACACCTCTTAAATTTACAGGACTTAACATTTCAAACATCCCACGTG 13436 0.13317202562818123 No Hit ATCTTGAATAGTGATATAGTTATTTCCTGTCAGTGATTTTGGTCTGAATC 12764 0.12651144203022516 No Hit GCTTAGGACACAGAGCACATCAAAAGTTCCCAAAGAGGGCTTGCTCTCTC 12470 0.12359743670611939 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC 12380 0.12270539425996456 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 12112 0.12004909008697018 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 11317 0.1121693818126025 No Hit CTACCAGAAGACAGCAGAAATGAAAAGCATTTACTTTGTGGCTGGATTAT 11310 0.11210000073345712 No Hit GTTATTTCCTGTCAGTGATTTTGGTCTGAATCAACCAGTTTATAAAGTCC 11177 0.11078176022969498 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 11008 0.10910670274747092 No Hit CTTCTGGGAAATCTCGCCTTCCTCGGCCTTTCACCAGCCAAGCAATGAAT 10721 0.1062620785025105 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC 10711 0.10616296267515997 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.973474820516104E-5 0.0 0.0 0.0 0.0 2 3.964633094021472E-5 0.0 0.0 9.91158273505368E-6 0.0 3 3.964633094021472E-5 0.0 0.0 9.91158273505368E-6 0.0 4 3.964633094021472E-5 0.0 0.0 9.91158273505368E-6 0.0 5 4.95579136752684E-5 9.91158273505368E-6 0.0 9.91158273505368E-6 0.0 6 6.938107914537576E-5 9.91158273505368E-6 0.0 9.91158273505368E-6 0.0 7 6.938107914537576E-5 9.91158273505368E-6 0.0 9.91158273505368E-6 0.0 8 6.938107914537576E-5 9.91158273505368E-6 0.0 9.91158273505368E-6 0.0 9 6.938107914537576E-5 9.91158273505368E-6 0.0 2.973474820516104E-5 0.0 10 1.486737410258052E-4 9.91158273505368E-6 0.0 7.929266188042944E-5 0.0 11 2.1805482017118097E-4 9.91158273505368E-6 0.0 7.929266188042944E-5 0.0 12 2.2796640290623465E-4 9.91158273505368E-6 0.0 9.91158273505368E-5 0.0 13 2.2796640290623465E-4 9.91158273505368E-6 0.0 1.0902741008559048E-4 0.0 14 2.378779856412883E-4 9.91158273505368E-6 0.0 1.1893899282064416E-4 0.0 15 2.378779856412883E-4 9.91158273505368E-6 0.0 1.1893899282064416E-4 0.0 16 2.47789568376342E-4 9.91158273505368E-6 0.0 1.7840848923096625E-4 0.0 17 2.47789568376342E-4 9.91158273505368E-6 0.0 2.0814323743612728E-4 0.0 18 2.47789568376342E-4 9.91158273505368E-6 0.0 2.1805482017118097E-4 0.0 19 2.577011511113957E-4 9.91158273505368E-6 0.0 2.378779856412883E-4 0.0 20 2.7752431658150306E-4 9.91158273505368E-6 0.0 2.6761273384644935E-4 0.0 21 3.072590647866641E-4 9.91158273505368E-6 0.0 3.6672856119698616E-4 0.0 22 3.6672856119698616E-4 9.91158273505368E-6 0.0 5.451370504279524E-4 0.0 23 3.8655172666709353E-4 9.91158273505368E-6 0.0 0.0010109814389754753 0.0 24 4.261980576073082E-4 9.91158273505368E-6 0.0 0.0014470910793178372 0.0 25 4.261980576073082E-4 9.91158273505368E-6 0.0 0.001516472158463213 0.0 26 4.757559712825766E-4 9.91158273505368E-6 0.0 0.0017246153958993403 0.0 27 5.054907194877377E-4 9.91158273505368E-6 0.0 0.0019624933815406286 0.0 28 5.253138849578451E-4 1.982316547010736E-5 0.0 0.003032944316926426 0.0 29 5.550486331630061E-4 1.982316547010736E-5 0.0 0.004440389065304049 0.0 30 5.550486331630061E-4 1.982316547010736E-5 0.0 0.006769611008041664 0.0 31 5.748717986331134E-4 1.982316547010736E-5 0.0 0.010526100864627009 0.0 32 5.748717986331134E-4 1.982316547010736E-5 9.91158273505368E-6 0.013806834749929777 0.0 33 5.847833813681672E-4 1.982316547010736E-5 9.91158273505368E-6 0.017355181369078994 0.0 34 6.046065468382745E-4 1.982316547010736E-5 9.91158273505368E-6 0.02214247583010992 0.0 35 6.046065468382745E-4 1.982316547010736E-5 9.91158273505368E-6 0.02870394360071546 0.0 36 6.145181295733282E-4 1.982316547010736E-5 9.91158273505368E-6 0.036276392810296466 0.0 37 6.442528777784892E-4 1.982316547010736E-5 9.91158273505368E-6 0.04706019482603487 9.91158273505368E-6 38 6.541644605135429E-4 2.973474820516104E-5 9.91158273505368E-6 0.059806490223313906 9.91158273505368E-6 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGAG 1370 0.0 17.662086 24 AGGTCGT 1460 0.0 17.476288 22 CGTCATT 1480 0.0 17.241062 26 CATTGCG 1525 0.0 17.021051 29 GTACTAG 1750 0.0 16.603058 1 GTCGTCA 1530 0.0 16.53394 24 TCGTCAG 1605 0.0 16.312782 41 GCTCGTC 1610 0.0 16.125544 39 CAATGCG 1425 0.0 16.053392 19 GTCGACG 1375 0.0 15.838861 36 AATGCGA 1475 0.0 15.65826 20 TAGGTCG 1635 0.0 15.471588 21 ATCGTCA 1470 0.0 15.414469 10 TGCGACG 1500 0.0 15.397212 22 CGACGAA 1390 0.0 15.35149 38 AGGTCGC 2875 0.0 15.150817 10 TCGACGA 1415 0.0 15.080188 37 GGTCGCC 2905 0.0 15.069634 11 GTGATCG 1645 0.0 14.978612 8 GAGGTCG 3060 0.0 14.738088 9 >>END_MODULE