##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2558152_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10414213 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.887634620110035 33.0 32.0 34.0 27.0 34.0 2 31.94778626094934 33.0 32.0 34.0 27.0 34.0 3 31.942311627388456 33.0 32.0 34.0 27.0 34.0 4 31.849917511769732 33.0 32.0 34.0 28.0 34.0 5 31.89922599048051 33.0 32.0 34.0 28.0 34.0 6 35.378973908061994 38.0 36.0 38.0 29.0 38.0 7 35.43498927859455 38.0 37.0 38.0 29.0 38.0 8 35.485415364559955 38.0 37.0 38.0 29.0 38.0 9 35.64118709690305 38.0 37.0 38.0 29.0 38.0 10 35.58408503839897 38.0 37.0 38.0 29.0 38.0 11 35.633440280124866 38.0 37.0 38.0 29.0 38.0 12 35.54125318927124 38.0 37.0 38.0 29.0 38.0 13 35.591977425466524 38.0 37.0 38.0 29.0 38.0 14 35.61132886373651 38.0 37.0 38.0 29.0 38.0 15 35.59940573521974 38.0 37.0 38.0 29.0 38.0 16 35.559918353888094 38.0 37.0 38.0 29.0 38.0 17 35.52449320942446 38.0 37.0 38.0 29.0 38.0 18 35.52940428623843 38.0 37.0 38.0 29.0 38.0 19 35.54187992890101 38.0 37.0 38.0 29.0 38.0 20 35.46599968715831 38.0 37.0 38.0 28.0 38.0 21 35.48238402652222 38.0 37.0 38.0 28.0 38.0 22 35.518767092626206 38.0 37.0 38.0 28.0 38.0 23 35.5228371073263 38.0 37.0 38.0 29.0 38.0 24 35.52372608472671 38.0 37.0 38.0 29.0 38.0 25 35.5339715060562 38.0 37.0 38.0 29.0 38.0 26 35.53813706326152 38.0 37.0 38.0 29.0 38.0 27 35.53672370634248 38.0 37.0 38.0 29.0 38.0 28 35.546984779358745 38.0 37.0 38.0 29.0 38.0 29 35.51363958083054 38.0 37.0 38.0 29.0 38.0 30 35.51957339455223 38.0 37.0 38.0 29.0 38.0 31 35.560096187777226 38.0 37.0 38.0 29.0 38.0 32 35.56870874448218 38.0 37.0 38.0 29.0 38.0 33 35.53565631891723 38.0 37.0 38.0 29.0 38.0 34 35.512437761739655 38.0 37.0 38.0 29.0 38.0 35 35.51600644234951 38.0 37.0 38.0 29.0 38.0 36 35.49502588433711 38.0 37.0 38.0 28.0 38.0 37 35.4803733128946 38.0 37.0 38.0 28.0 38.0 38 35.48201606784881 38.0 37.0 38.0 28.0 38.0 39 35.48465707394308 38.0 37.0 38.0 28.0 38.0 40 35.48574654657054 38.0 37.0 38.0 28.0 38.0 41 35.47834838791947 38.0 37.0 38.0 28.0 38.0 42 35.38698219442986 38.0 37.0 38.0 28.0 38.0 43 35.435590284162615 38.0 37.0 38.0 28.0 38.0 44 35.41231152080335 38.0 37.0 38.0 28.0 38.0 45 35.42350449333041 38.0 37.0 38.0 28.0 38.0 46 35.38553859038604 38.0 37.0 38.0 28.0 38.0 47 35.32678782352541 38.0 37.0 38.0 27.0 38.0 48 35.28676194735022 38.0 37.0 38.0 27.0 38.0 49 35.19923761881959 38.0 37.0 38.0 27.0 38.0 50 34.90399476177412 38.0 36.0 38.0 25.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 20.0 4 525.0 5 1503.0 6 2183.0 7 1070.0 8 272.0 9 184.0 10 152.0 11 140.0 12 108.0 13 131.0 14 128.0 15 210.0 16 511.0 17 1684.0 18 8251.0 19 25405.0 20 46844.0 21 64630.0 22 78690.0 23 92129.0 24 105793.0 25 120712.0 26 135326.0 27 153312.0 28 172943.0 29 198091.0 30 227943.0 31 262068.0 32 307508.0 33 374284.0 34 483679.0 35 696330.0 36 1391517.0 37 5459937.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.73744575804913 19.047545397718586 13.753974813078953 24.461034031153332 2 14.654232633805359 21.149365775407126 39.40524358393668 24.79115800685083 3 17.760842802043708 27.554516121381422 29.8921195485439 24.79252152803097 4 12.3278138428878 17.625468247523767 37.5617947475605 32.484923162027926 5 13.331751276913526 37.712895750997255 34.40776796744869 14.547585004640528 6 30.474890264808668 36.672650082410094 18.783659115763193 14.068800537018051 7 26.205220742254838 32.07215858769235 23.78749083181359 17.935129838239224 8 26.919155126342726 32.74590280902876 21.28983522251874 19.045106842109767 9 27.2679624393117 14.593392001491203 20.518923987935842 37.61972157126125 10 16.635110980465903 28.06221244454532 31.816741717725446 23.48593485726333 11 32.82589795162983 23.808551012462107 23.0740388980089 20.291512137899172 12 23.45888870952864 25.804113627279158 29.921392168619132 20.815605494573074 13 28.723595420105536 21.270062406981463 25.994702555934126 24.01163961697888 14 23.37997260048355 20.754437046790674 27.100162750091215 28.765427602634556 15 25.15608934116793 26.612215358370594 25.012911559254185 23.21878374120729 16 22.92238957532831 26.765042081275265 26.738041034672417 23.574527308724008 17 22.299942690590303 26.976136838419368 27.49053779749676 23.233382673493573 18 23.42268195794626 25.1904882948865 29.481951603455673 21.904878143711567 19 23.272016415235115 26.41200183907516 29.100991073182986 21.21499067250674 20 24.16011308991559 24.861861306118573 28.951291277060108 22.026734326905725 21 24.625225487338025 25.57625502788481 27.448537385401895 22.349982099375275 22 23.867288544451657 25.539464182844828 27.247610505130627 23.345636767572888 23 22.239174563596773 26.21827232668195 27.750602790244365 23.791950319476907 24 22.867520342638755 27.20995117459234 27.33683804753713 22.585690435231776 25 23.372606573721256 25.06336924930068 27.15713921133486 24.4068849656432 26 23.395143138758034 25.433309310900782 27.97553343587303 23.196014114468156 27 23.934257442713637 25.21787471496496 27.019001182847962 23.828866659473434 28 22.857454130214172 24.973419297220342 28.758057913507784 23.411068659057705 29 22.975905714487226 24.590691942249972 29.371392761048654 23.062009582214156 30 23.17443169600831 25.684521459013453 28.827677435806088 22.31336940917215 31 24.266057214274515 24.70322919837295 27.626692538992963 23.404021048359574 32 22.016625874587774 25.533529167337193 28.38038233266641 24.069462625408622 33 23.102908031074392 26.146116594499624 27.619108287843403 23.13186708658258 34 22.189353120643514 25.8012956477148 28.410011017896224 23.599340213745457 35 23.116027314561656 26.259773130675416 28.71721507464481 21.906984480118115 36 23.655587933779326 25.74857588658206 27.38439677063247 23.211439409006143 37 23.739666765373528 26.14962909983376 27.75332097992279 22.357383154869915 38 23.96057413969131 25.48638279983184 27.49461293615999 23.05843012431686 39 23.65250600493001 25.072502119189238 27.699009212972225 23.57598266290853 40 23.561419085651465 25.686388808207756 27.760723979917973 22.99146812622281 41 22.116236053680936 25.920725877878066 27.942577589469913 24.020460478971085 42 24.273076955967085 26.424446901836458 27.26612021348628 22.03635592871018 43 24.2227075658036 24.31570702212186 27.370700732649333 24.090884679425205 44 23.206399878241044 25.774637548032906 28.191656590549385 22.827305983176664 45 24.84130667111259 24.81147724243162 27.284765209935408 23.06245087652038 46 22.690574364193537 25.42749535664634 29.184086345203152 22.697843933956968 47 23.820354940799984 25.621997286765946 27.855498294096826 22.702149478337248 48 24.335498092861517 26.176539344179478 26.98570697816563 22.502255584793375 49 23.137537386724667 25.816009247374183 28.795093831161587 22.251359534739564 50 23.50225303412725 26.277744470984242 26.892574115138046 23.327428379750454 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1413.0 1 1547.5 2 1682.0 3 4847.0 4 8012.0 5 9439.5 6 10867.0 7 9728.5 8 8590.0 9 10856.5 10 13123.0 11 18247.0 12 23371.0 13 41548.0 14 59725.0 15 74100.5 16 88476.0 17 81634.5 18 74793.0 19 64909.5 20 55026.0 21 63328.5 22 71631.0 23 85388.0 24 99145.0 25 122674.0 26 146203.0 27 166286.5 28 186370.0 29 214587.0 30 242804.0 31 271857.5 32 300911.0 33 327227.0 34 353543.0 35 386602.5 36 419662.0 37 444115.5 38 468569.0 39 488457.0 40 508345.0 41 528363.5 42 548382.0 43 558474.0 44 568566.0 45 620587.5 46 672609.0 47 764944.0 48 857279.0 49 866427.5 50 875576.0 51 758345.5 52 641115.0 53 579572.0 54 518029.0 55 525742.5 56 533456.0 57 499091.5 58 464727.0 59 441649.0 60 418571.0 61 364160.0 62 309749.0 63 270814.0 64 231879.0 65 196448.0 66 161017.0 67 143959.0 68 126901.0 69 116369.5 70 105838.0 71 87309.5 72 68781.0 73 65464.5 74 62148.0 75 56101.0 76 50054.0 77 37936.5 78 25819.0 79 18306.5 80 10794.0 81 9259.5 82 7725.0 83 6957.0 84 6189.0 85 4820.5 86 3452.0 87 3269.5 88 3087.0 89 1609.5 90 132.0 91 100.5 92 69.0 93 37.0 94 5.0 95 2.5 96 0.0 97 0.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04420881347443153 2 0.0 3 0.0 4 0.016496685827340003 5 0.015411630240326369 6 0.06831049067269893 7 0.07011571589711099 8 0.07562741418866696 9 0.06263555392999932 10 0.07434071110318179 11 0.07014452268260693 12 0.0658043003345524 13 0.07379338217875897 14 0.07163287326656369 15 0.06598674330936001 16 0.06922270554673694 17 0.0724490655222819 18 0.08371251865119332 19 0.06537219855211335 20 0.06643804961546301 21 0.06486327867501845 22 0.05508817613006379 23 0.05712385563844335 24 0.06257794035900745 25 0.06680293556507823 26 0.05651891314302867 27 0.060321408828492365 28 0.05133369175375998 29 0.067359866751333 30 0.05894828538651936 31 0.05935158038346248 32 0.055097778391895766 33 0.06159850965214558 34 0.06337492809106171 35 0.06456560855822711 36 0.057450332540730634 37 0.06040782918498018 38 0.07046139732306224 39 0.06655327675744677 40 0.06049424954146799 41 0.07311162158868846 42 0.06349015523304546 43 0.0532925531674837 44 0.06495930129333825 45 0.016102993092228863 46 0.009045330645724263 47 0.014854699054071585 48 0.021883554715080248 49 0.11642742471274595 50 0.00885328540908468 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1.0414213E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.22186047629004 #Duplication Level Percentage of deduplicated Percentage of total 1 70.33622024057176 24.773725357430262 2 15.128103499834195 10.6567990148407 3 5.997232208981065 6.337010283259311 4 2.8135228649905577 3.96390039190197 5 1.5136295773398616 2.6656424892925235 6 0.9259846389649065 1.9568941054085847 7 0.6171549228153923 1.5216141208561509 8 0.4327194093801743 1.2192946130056903 9 0.3053181342546829 0.9678485453039669 >10 1.61205969240859 10.304417301439955 >50 0.14696433415065857 3.6310131806700507 >100 0.13640048913289538 10.135635552622967 >500 0.01951136340374693 4.756533091767184 >1k 0.013671720778812586 9.238280380166065 >5k 9.31540031826599E-4 2.188532772219085 >10k+ 5.753629608340759E-4 5.6828587998156 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 75088 0.7210146364396426 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 61769 0.5931221110995137 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 51485 0.4943724504194412 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 44214 0.4245544046391216 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 38993 0.374420995614359 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 33100 0.31783486663850646 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31231 0.2998882392745376 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG 28209 0.2708702040182969 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 26583 0.255256926279499 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25505 0.2449056880246256 No Hit CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCACTGTCCTT 21241 0.20396164357306693 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 19132 0.18371047336942312 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC 19082 0.18323036027782416 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 17982 0.1726678722626472 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 17220 0.1653509487466792 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC 16419 0.15765953701926397 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 14705 0.14120126023925186 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT 12965 0.12449332465160833 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 11476 0.11019555678379153 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 11327 0.10876481977082665 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 11161 0.10717084430671815 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9204523663958094E-5 0.0 0.0 0.0 0.0 2 2.880678549593714E-5 0.0 0.0 0.0 0.0 3 2.880678549593714E-5 0.0 0.0 9.602261831979047E-6 0.0 4 2.880678549593714E-5 0.0 0.0 3.840904732791619E-5 0.0 5 1.248294038157276E-4 0.0 0.0 5.761357099187428E-5 0.0 6 1.440339274796857E-4 0.0 0.0 5.761357099187428E-5 0.0 7 1.7284071297562283E-4 0.0 0.0 5.761357099187428E-5 0.0 8 1.9204523663958093E-4 0.0 0.0 5.761357099187428E-5 2.880678549593714E-5 9 2.0164749847155998E-4 0.0 0.0 8.642035648781141E-5 2.880678549593714E-5 10 3.8409047327916186E-4 0.0 0.0 1.440339274796857E-4 2.880678549593714E-5 11 5.089198770948895E-4 1.9204523663958094E-5 0.0 1.7284071297562283E-4 2.880678549593714E-5 12 5.185221389268685E-4 1.9204523663958094E-5 0.0 1.9204523663958093E-4 2.880678549593714E-5 13 5.185221389268685E-4 1.9204523663958094E-5 0.0 2.0164749847155998E-4 2.880678549593714E-5 14 5.185221389268685E-4 1.9204523663958094E-5 0.0 2.11249760303539E-4 2.880678549593714E-5 15 6.049424954146799E-4 1.9204523663958094E-5 0.0 2.2085202213551806E-4 3.840904732791619E-5 16 6.913628519024913E-4 1.9204523663958094E-5 0.0 2.496588076314552E-4 5.761357099187428E-5 17 8.642035648781141E-4 1.9204523663958094E-5 0.0 3.1687464045530855E-4 5.761357099187428E-5 18 8.834080885420722E-4 1.9204523663958094E-5 0.0 3.360791641192666E-4 5.761357099187428E-5 19 9.602261831979047E-4 1.9204523663958094E-5 0.0 3.6488594961520376E-4 5.761357099187428E-5 20 9.698284450298837E-4 1.9204523663958094E-5 0.0 4.705108297669733E-4 5.761357099187428E-5 21 0.0010274420160217579 1.9204523663958094E-5 0.0 5.665334480867637E-4 9.602261831979047E-5 22 0.001065851063349674 1.9204523663958094E-5 0.0 8.546013030461351E-4 9.602261831979047E-5 23 0.0011618736816694647 1.9204523663958094E-5 0.0 0.0013059076091491502 1.056248801517695E-4 24 0.0011810782053334227 1.9204523663958094E-5 0.0 0.001670793558764354 1.056248801517695E-4 25 0.0012002827289973807 2.880678549593714E-5 0.0 0.001843634271739977 1.056248801517695E-4 26 0.0013251121328131084 2.880678549593714E-5 0.0 0.002035679508379558 1.056248801517695E-4 27 0.0013827257038049826 2.880678549593714E-5 0.0 0.0022373270068511177 1.056248801517695E-4 28 0.0014691460602927941 2.880678549593714E-5 0.0 0.003504825568672352 1.248294038157276E-4 29 0.0015459641549486266 4.801130915989523E-5 0.0 0.004964369367133167 1.248294038157276E-4 30 0.0016515890351003959 4.801130915989523E-5 0.0 0.007393741610623865 1.248294038157276E-4 31 0.0017188048679242494 4.801130915989523E-5 0.0 0.010466465396857161 1.248294038157276E-4 32 0.0017380093915882074 4.801130915989523E-5 0.0 0.014038506798353365 1.248294038157276E-4 33 0.0017764184389161236 4.801130915989523E-5 0.0 0.01861878569220737 1.248294038157276E-4 34 0.001843634271739977 4.801130915989523E-5 0.0 0.023544746012012622 1.440339274796857E-4 35 0.001853236533571956 4.801130915989523E-5 0.0 0.030928885360804508 1.440339274796857E-4 36 0.0018916455808998722 6.721583282385332E-5 0.0 0.039494102914929816 1.440339274796857E-4 37 0.0019588614137237255 6.721583282385332E-5 0.0 0.05260119031558121 1.440339274796857E-4 38 0.0019780659373876837 7.681809465583238E-5 0.0 0.06601555009485595 1.440339274796857E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATGCGA 1230 0.0 19.850521 20 CAATGCG 1235 0.0 19.414124 19 GTACTAG 1550 0.0 19.167934 1 CGACGAG 1360 0.0 17.468416 24 TGCGACG 1380 0.0 17.214422 22 CGACGAA 1115 0.0 16.770182 38 GATCACT 6500 0.0 15.8050995 38 CGAACAA 1210 0.0 15.455815 41 CGTCGTA 2165 0.0 15.445217 10 ATCGTCA 1555 0.0 15.4207115 10 CCGTCGT 2190 0.0 15.268755 9 CATTGCG 1285 0.0 15.235679 29 GTCGTCA 1360 0.0 14.718758 24 AATTCGT 1215 0.0 14.666744 16 CAATTCG 1225 0.0 14.547017 15 ACTGTCC 7040 0.0 14.500286 42 GACGAGT 1595 0.0 14.480887 25 GCAGATC 7340 0.0 14.416002 35 GTATTAG 2150 0.0 14.330546 1 AGTCGAC 1295 0.0 14.269386 35 >>END_MODULE