##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2558150_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10468827 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.832308051322272 33.0 32.0 34.0 27.0 34.0 2 31.879621661529033 33.0 32.0 34.0 27.0 34.0 3 31.88749073797857 33.0 32.0 34.0 27.0 34.0 4 31.786219506731747 33.0 32.0 34.0 27.0 34.0 5 31.835737470874243 33.0 32.0 34.0 28.0 34.0 6 35.30968378787805 38.0 36.0 38.0 29.0 38.0 7 35.362569846650445 38.0 36.0 38.0 29.0 38.0 8 35.41149041817197 38.0 37.0 38.0 29.0 38.0 9 35.583587158332065 38.0 37.0 38.0 29.0 38.0 10 35.526523076558625 38.0 37.0 38.0 29.0 38.0 11 35.58444608932787 38.0 37.0 38.0 29.0 38.0 12 35.48409224834836 38.0 37.0 38.0 29.0 38.0 13 35.53796504613172 38.0 37.0 38.0 29.0 38.0 14 35.55130073311938 38.0 37.0 38.0 29.0 38.0 15 35.53368529253564 38.0 37.0 38.0 29.0 38.0 16 35.50232342171668 38.0 37.0 38.0 29.0 38.0 17 35.462448276201336 38.0 37.0 38.0 28.0 38.0 18 35.46155724991921 38.0 37.0 38.0 28.0 38.0 19 35.47370808592023 38.0 37.0 38.0 28.0 38.0 20 35.403427623744285 38.0 37.0 38.0 28.0 38.0 21 35.42748027071228 38.0 37.0 38.0 28.0 38.0 22 35.465124889350065 38.0 37.0 38.0 28.0 38.0 23 35.474010698619814 38.0 37.0 38.0 28.0 38.0 24 35.472073041229926 38.0 37.0 38.0 28.0 38.0 25 35.48747495779613 38.0 37.0 38.0 28.0 38.0 26 35.48777623319212 38.0 37.0 38.0 28.0 38.0 27 35.49192473999236 38.0 37.0 38.0 28.0 38.0 28 35.49863876822112 38.0 37.0 38.0 28.0 38.0 29 35.46424790475571 38.0 37.0 38.0 28.0 38.0 30 35.478064925516485 38.0 37.0 38.0 28.0 38.0 31 35.51538964202962 38.0 37.0 38.0 29.0 38.0 32 35.52372849412833 38.0 37.0 38.0 29.0 38.0 33 35.50233746340445 38.0 37.0 38.0 28.0 38.0 34 35.48352293910292 38.0 37.0 38.0 28.0 38.0 35 35.49218455897685 38.0 37.0 38.0 28.0 38.0 36 35.47237355245244 38.0 37.0 38.0 28.0 38.0 37 35.4666893435148 38.0 37.0 38.0 28.0 38.0 38 35.46798136983255 38.0 37.0 38.0 28.0 38.0 39 35.47822616612157 38.0 37.0 38.0 28.0 38.0 40 35.47694885014338 38.0 37.0 38.0 28.0 38.0 41 35.47800426924621 38.0 37.0 38.0 28.0 38.0 42 35.38915276754502 38.0 37.0 38.0 28.0 38.0 43 35.44025161558215 38.0 37.0 38.0 28.0 38.0 44 35.42581771577656 38.0 37.0 38.0 28.0 38.0 45 35.454873788629804 38.0 37.0 38.0 28.0 38.0 46 35.42549752708685 38.0 37.0 38.0 28.0 38.0 47 35.38167848222155 38.0 37.0 38.0 28.0 38.0 48 35.35180856460805 38.0 37.0 38.0 28.0 38.0 49 35.26978619476662 38.0 37.0 38.0 27.0 38.0 50 34.971029610098626 38.0 36.0 38.0 26.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 18.0 4 536.0 5 1400.0 6 2137.0 7 1052.0 8 260.0 9 214.0 10 146.0 11 129.0 12 115.0 13 135.0 14 118.0 15 204.0 16 535.0 17 1631.0 18 8218.0 19 26101.0 20 48602.0 21 67868.0 22 82835.0 23 95698.0 24 109364.0 25 123791.0 26 139569.0 27 156436.0 28 176031.0 29 200090.0 30 228804.0 31 264065.0 32 309307.0 33 375976.0 34 486494.0 35 700199.0 36 1402280.0 37 5458469.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.96721194448848 18.808028166873992 13.449227447431038 24.775532441206487 2 15.461407471916386 21.073354254492887 37.587916965291335 25.877321308299393 3 17.83750939813983 26.325891143296186 29.820370515244925 26.016228943319053 4 12.872460242676379 17.583313421910425 36.28288621082772 33.26134012458548 5 14.3755075368627 36.751123985165115 33.900796964236925 14.97257151373526 6 31.743189385029723 35.75298530745455 18.22032586037876 14.283499447136967 7 27.312024825090138 31.55025667976272 23.011823920340092 18.125894574807052 8 27.633029069965854 32.03309472332624 20.910059962701474 19.42381624400643 9 27.036344325610166 14.637535489070553 20.152019006007812 38.17410117931147 10 17.15508385149543 27.30784587923362 31.229786564087984 24.307283705182968 11 33.79520886342201 22.925840014613314 22.75419475604952 20.524756365915152 12 23.62425702940225 25.444625798217864 29.385285263240803 21.545831909139082 13 29.21196615870568 20.54206063451758 25.5562261752887 24.68974703148805 14 23.77274401378236 20.70548465901938 26.02522451631885 29.49654681087941 15 25.540690657939784 26.686772288728 23.879682839419534 23.892854213912678 16 24.134648453951375 26.29531982463274 25.919205115955318 23.650826605460566 17 23.321874099071714 26.666655195961702 26.742658175286138 23.26881252968045 18 24.446499218513463 24.710691284568075 28.42993432339155 22.412875173526913 19 24.1611500350167 26.36507540371 27.614273584848853 21.859500976424446 20 24.71083055375858 24.310525909307103 27.85681596079997 23.12182757613435 21 25.11422560668464 25.28215411878393 26.564390438330786 23.039229836200644 22 24.512082859134043 24.990786803185088 26.314763325971697 24.18236701170917 23 22.842132999918093 25.458392593578782 27.041834635075563 24.65763977142757 24 23.297513307061703 26.84400176248675 26.432235538576382 23.426249391875164 25 24.083971760385953 24.531943623619902 26.27067701225793 25.11340760373621 26 23.780448759302956 25.339417589674923 27.075953807056628 23.80417984396549 27 24.433094254872127 25.038608676902292 26.148124274922452 24.380172793303124 28 23.589437277263347 24.802013458096123 27.596866849714104 24.011682414926426 29 23.800078647327148 24.594992073137043 28.101775835235955 23.50315344429986 30 23.882229658912813 25.283751884526932 27.877904637346006 22.956113819214252 31 24.989758930088712 24.528409005107058 26.35141502626359 24.13041703854064 32 23.005317763639592 25.25129661166869 27.09152132997516 24.651864294716557 33 23.370566254863196 25.374004242765718 27.109065076609205 24.146364425761874 34 23.201148033880152 25.13655315902867 27.334431295889882 24.327867511201294 35 23.863795810707636 25.6352623306633 27.68486102280456 22.8160808358245 36 24.051986078222832 25.460468820127858 26.588851109315158 23.898693992334152 37 24.345302337104062 25.607855033867 26.947940357988177 23.09890227104076 38 24.217878809139776 25.159655097196282 26.657683986428864 23.964782107235077 39 24.449275856858034 24.504370016351416 26.648062351601098 24.39829177518945 40 24.387378415935515 25.612741057041465 26.480401605066877 23.519478921956143 41 23.036174964641 25.87050632867832 26.739119961366058 24.35419874531462 42 25.31458473438699 26.084630586356965 26.530103521536812 22.07068115771923 43 24.97534026421398 24.11866950105095 26.255639531766544 24.650350702968524 44 23.83604380920429 25.39401664183916 26.79948786988569 23.970451679070866 45 25.075165949774597 24.817407718397316 26.417715652545343 23.689710679282744 46 23.399907068204374 25.038355382344413 27.972709309572547 23.58902823987867 47 24.559577938470984 25.11232851218687 27.101258023925773 23.22683552541637 48 24.912831997492972 25.976743097308862 26.17297739374026 22.937447511457908 49 23.802531397172377 25.690478633608215 27.532829239374944 22.97416072984446 50 24.198497631753842 26.119336755422996 25.712463267370556 23.969702345452607 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 937.0 1 1212.5 2 1488.0 3 4291.5 4 7095.0 5 7920.5 6 8746.0 7 7808.5 8 6871.0 9 8937.5 10 11004.0 11 15153.5 12 19303.0 13 34995.5 14 50688.0 15 59361.0 16 68034.0 17 64374.0 18 60714.0 19 53253.5 20 45793.0 21 51836.5 22 57880.0 23 68837.5 24 79795.0 25 95283.5 26 110772.0 27 127864.0 28 144956.0 29 169606.0 30 194256.0 31 219705.0 32 245154.0 33 269339.5 34 293525.0 35 325165.0 36 356805.0 37 392239.5 38 427674.0 39 460063.5 40 492453.0 41 516802.5 42 541152.0 43 552925.0 44 564698.0 45 626654.5 46 688611.0 47 797074.5 48 905538.0 49 916068.0 50 926598.0 51 802497.0 52 678396.0 53 611430.5 54 544465.0 55 563225.0 56 581985.0 57 563297.0 58 544609.0 59 508946.5 60 473284.0 61 418683.0 62 364082.0 63 319326.0 64 274570.0 65 235859.0 66 197148.0 67 177288.0 68 157428.0 69 135103.5 70 112779.0 71 89873.5 72 66968.0 73 63817.5 74 60667.0 75 46654.0 76 32641.0 77 27482.0 78 22323.0 79 18495.5 80 14668.0 81 12875.5 82 11083.0 83 10480.0 84 9877.0 85 7796.0 86 5715.0 87 5491.5 88 5268.0 89 2744.5 90 221.0 91 155.5 92 90.0 93 51.5 94 13.0 95 8.0 96 3.0 97 3.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.044131018690059545 2 0.0 3 0.0 4 0.015627347743925848 5 0.015350334856044522 6 0.0661296628552559 7 0.06832666162121125 8 0.07473616671667227 9 0.061621039300773624 10 0.07311229806357485 11 0.06814517041880623 12 0.06467773323601583 13 0.07188006832093032 14 0.07009381280252315 15 0.0644293768537774 16 0.06805920090187755 17 0.07063828640973817 18 0.08247342324025414 19 0.06377027722399081 20 0.06490698528115901 21 0.06339774265063317 22 0.05325333965304804 23 0.05538347323916997 24 0.060532092086343574 25 0.06482101576423031 26 0.05499183432871706 27 0.058774493073579306 28 0.05002470668394845 29 0.06622518454073222 30 0.057207937431767664 31 0.05781927621881611 32 0.053434830855453044 33 0.06029328787265278 34 0.06130581773870177 35 0.062423421458774705 36 0.055354816733527074 37 0.05860255403972193 38 0.06889979173406915 39 0.06436251167394398 40 0.059318966680794324 41 0.07220484205154981 42 0.06173566532334521 43 0.051715440516879305 44 0.06344550349337132 45 0.015799286777783222 46 0.008931277592035861 47 0.014691235226257917 48 0.02155924441200528 49 0.11380453607648688 50 0.009112768794440868 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1.0468827E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.51980100674814 #Duplication Level Percentage of deduplicated Percentage of total 1 69.54806874901462 25.39881631117653 2 15.394695260254432 11.244224149280411 3 6.03249144436402 6.60916161369254 4 2.815401856214484 4.112716621719291 5 1.5764397790134985 2.8785633514347495 6 0.9575612983169631 2.098196883977933 7 0.6711600869845574 1.7157442974243466 8 0.48325902889181943 1.4118818855874877 9 0.35545398458365834 1.1682997905645829 >10 1.8862124132948541 12.519025099825399 >50 0.14898277469881754 3.788766169826912 >100 0.10471602162502941 7.487084759176509 >500 0.012320885140545183 3.1413358786330066 >1k 0.011529340107417274 8.725875058581796 >5k 0.0011292974199889766 2.6552088817076074 >10k+ 5.777800753431972E-4 5.045099247390936 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 65542 0.6260682309488923 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 51799 0.4947927785987866 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 43066 0.41137369067231694 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38330 0.36613462043073214 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 37206 0.3553979829831938 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 28120 0.26860697955941004 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26938 0.2573163163361091 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 25098 0.23974032620846633 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG 24145 0.23063710958257308 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22292 0.2129369412638111 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 18692 0.17854913449233614 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 17821 0.17022919568734873 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 16525 0.15784958524961776 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC 15484 0.14790577779153288 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 14458 0.13810525286166253 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC 14212 0.1357554193989451 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT 12236 0.11688033434882436 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 11756 0.11229529344596104 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 11267 0.10762428302616901 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 10535 0.10063209564930245 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.552168547631936E-6 0.0 0.0 0.0 1.9104337095263872E-5 2 9.552168547631936E-6 9.552168547631936E-6 0.0 9.552168547631936E-6 1.9104337095263872E-5 3 9.552168547631936E-6 9.552168547631936E-6 0.0 9.552168547631936E-6 1.9104337095263872E-5 4 9.552168547631936E-6 9.552168547631936E-6 0.0 9.552168547631936E-6 1.9104337095263872E-5 5 9.552168547631936E-6 9.552168547631936E-6 0.0 9.552168547631936E-6 1.9104337095263872E-5 6 1.9104337095263872E-5 9.552168547631936E-6 0.0 9.552168547631936E-6 1.9104337095263872E-5 7 2.8656505642895808E-5 9.552168547631936E-6 0.0 1.9104337095263872E-5 1.9104337095263872E-5 8 3.8208674190527743E-5 9.552168547631936E-6 0.0 3.8208674190527743E-5 2.8656505642895808E-5 9 3.8208674190527743E-5 9.552168547631936E-6 0.0 3.8208674190527743E-5 2.8656505642895808E-5 10 6.686517983342355E-5 9.552168547631936E-6 0.0 6.686517983342355E-5 2.8656505642895808E-5 11 6.686517983342355E-5 1.9104337095263872E-5 0.0 9.552168547631937E-5 2.8656505642895808E-5 12 6.686517983342355E-5 2.8656505642895808E-5 0.0 1.050738540239513E-4 2.8656505642895808E-5 13 6.686517983342355E-5 2.8656505642895808E-5 0.0 1.2417819111921517E-4 3.8208674190527743E-5 14 6.686517983342355E-5 2.8656505642895808E-5 0.0 1.4328252821447905E-4 3.8208674190527743E-5 15 6.686517983342355E-5 2.8656505642895808E-5 0.0 1.6238686530974293E-4 3.8208674190527743E-5 16 9.552168547631937E-5 2.8656505642895808E-5 0.0 1.6238686530974293E-4 5.7313011285791615E-5 17 1.050738540239513E-4 2.8656505642895808E-5 0.0 1.7193903385737485E-4 5.7313011285791615E-5 18 1.050738540239513E-4 2.8656505642895808E-5 0.0 1.7193903385737485E-4 5.7313011285791615E-5 19 1.050738540239513E-4 2.8656505642895808E-5 0.0 1.9104337095263873E-4 5.7313011285791615E-5 20 1.1462602257158323E-4 2.8656505642895808E-5 0.0 2.1969987659553453E-4 5.7313011285791615E-5 21 1.2417819111921517E-4 2.8656505642895808E-5 0.0 2.9611722497659E-4 6.686517983342355E-5 22 1.337303596668471E-4 2.8656505642895808E-5 0.0 4.680562588339649E-4 6.686517983342355E-5 23 1.6238686530974293E-4 2.8656505642895808E-5 0.0 8.883516749297701E-4 6.686517983342355E-5 24 2.101477080479026E-4 2.8656505642895808E-5 0.0 0.0010698428773347768 6.686517983342355E-5 25 2.2925204514316646E-4 2.8656505642895808E-5 0.0 0.0011271558886205685 6.686517983342355E-5 26 2.7701288788132617E-4 2.8656505642895808E-5 0.0 0.0012608862482874155 6.686517983342355E-5 27 2.9611722497659E-4 2.8656505642895808E-5 0.0 0.0014805861248829502 7.641734838105549E-5 28 3.152215620718539E-4 3.8208674190527743E-5 0.0 0.002378489968360352 7.641734838105549E-5 29 3.343258991671178E-4 3.8208674190527743E-5 0.0 0.0033337068231235455 7.641734838105549E-5 30 3.343258991671178E-4 3.8208674190527743E-5 0.0 0.005244140532649933 7.641734838105549E-5 31 3.7253457335764554E-4 3.8208674190527743E-5 0.0 0.008014269411463194 7.641734838105549E-5 32 3.7253457335764554E-4 3.8208674190527743E-5 0.0 0.010593354919323818 7.641734838105549E-5 33 4.011910790005413E-4 3.8208674190527743E-5 0.0 0.01361184018037551 7.641734838105549E-5 34 4.1074324754817324E-4 3.8208674190527743E-5 0.0 0.017528229284904603 7.641734838105549E-5 35 4.1074324754817324E-4 3.8208674190527743E-5 0.0 0.023230873907840868 7.641734838105549E-5 36 4.202954160958052E-4 3.8208674190527743E-5 0.0 0.02904814455334872 8.596951692868743E-5 37 4.48951921738701E-4 3.8208674190527743E-5 0.0 0.038523895752599596 8.596951692868743E-5 38 4.585040902863329E-4 4.776084273815968E-5 0.0 0.04866829875018471 1.050738540239513E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAACG 520 0.0 16.922857 2 CGTCGTA 2915 0.0 16.527613 10 CTAACGC 495 0.0 16.444311 3 TAGGTCG 630 0.0 16.41076 21 CCGTCGT 2975 0.0 16.194052 9 TACCGTC 3185 0.0 16.094522 7 GGCGTTA 2840 0.0 15.493942 42 ATACCGT 3465 0.0 15.17477 6 ACCGTCG 3300 0.0 14.799879 8 CTAGTAC 1270 0.0 14.551063 3 CGGCGTT 3165 0.0 14.181742 41 GTCGTAG 3465 0.0 13.840628 11 GTAAACG 1635 0.0 13.588415 27 CCTAGTA 1250 0.0 13.375828 2 CGTTATT 3440 0.0 13.250806 44 GCGGCGT 3460 0.0 13.099537 40 TGCGACG 625 0.0 13.021902 22 CATTGCG 815 0.0 12.955463 29 TAACGCC 2400 0.0 12.741867 4 ATACCGC 3405 0.0 12.662053 27 >>END_MODULE