##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2558149_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10678772 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.92017836882368 33.0 32.0 34.0 27.0 34.0 2 31.959906157749224 33.0 32.0 34.0 27.0 34.0 3 31.966184220432837 33.0 32.0 34.0 28.0 34.0 4 31.869204530258724 33.0 32.0 34.0 28.0 34.0 5 31.921983258000076 33.0 33.0 34.0 28.0 34.0 6 35.429209182479035 38.0 36.0 38.0 29.0 38.0 7 35.49511385766079 38.0 37.0 38.0 29.0 38.0 8 35.55829911903728 38.0 37.0 38.0 29.0 38.0 9 35.71320897196794 38.0 37.0 38.0 29.0 38.0 10 35.65641021270985 38.0 37.0 38.0 29.0 38.0 11 35.714955895677896 38.0 37.0 38.0 29.0 38.0 12 35.62154159673041 38.0 37.0 38.0 29.0 38.0 13 35.676075676117065 38.0 37.0 38.0 29.0 38.0 14 35.68635560343455 38.0 37.0 38.0 29.0 38.0 15 35.68330094508994 38.0 37.0 38.0 29.0 38.0 16 35.6494126852788 38.0 37.0 38.0 29.0 38.0 17 35.60904381140453 38.0 37.0 38.0 29.0 38.0 18 35.614053563462164 38.0 37.0 38.0 29.0 38.0 19 35.626060000157324 38.0 37.0 38.0 29.0 38.0 20 35.56252732055708 38.0 37.0 38.0 29.0 38.0 21 35.57478219405752 38.0 37.0 38.0 29.0 38.0 22 35.61673711172033 38.0 37.0 38.0 29.0 38.0 23 35.61876178272183 38.0 37.0 38.0 29.0 38.0 24 35.620147241649136 38.0 37.0 38.0 29.0 38.0 25 35.633399795407186 38.0 37.0 38.0 29.0 38.0 26 35.639115902090616 38.0 37.0 38.0 29.0 38.0 27 35.64209330436121 38.0 37.0 38.0 29.0 38.0 28 35.65010658528902 38.0 37.0 38.0 29.0 38.0 29 35.615080554206045 38.0 37.0 38.0 29.0 38.0 30 35.623441815219955 38.0 37.0 38.0 29.0 38.0 31 35.65986454247736 38.0 37.0 38.0 29.0 38.0 32 35.666159367387934 38.0 37.0 38.0 29.0 38.0 33 35.64372738738125 38.0 37.0 38.0 29.0 38.0 34 35.61949548131564 38.0 37.0 38.0 29.0 38.0 35 35.6254903653716 38.0 37.0 38.0 29.0 38.0 36 35.6038207389389 38.0 37.0 38.0 29.0 38.0 37 35.59649648854756 38.0 37.0 38.0 29.0 38.0 38 35.59335989194263 38.0 37.0 38.0 29.0 38.0 39 35.60155802558571 38.0 37.0 38.0 29.0 38.0 40 35.59563131416234 38.0 37.0 38.0 29.0 38.0 41 35.589337051114114 38.0 37.0 38.0 29.0 38.0 42 35.4987323448801 38.0 37.0 38.0 28.0 38.0 43 35.54402781518324 38.0 37.0 38.0 29.0 38.0 44 35.526962276186815 38.0 37.0 38.0 29.0 38.0 45 35.544269977858875 38.0 37.0 38.0 29.0 38.0 46 35.502933857937975 38.0 37.0 38.0 28.0 38.0 47 35.45004790813026 38.0 37.0 38.0 28.0 38.0 48 35.41324873309403 38.0 37.0 38.0 28.0 38.0 49 35.32510423483149 38.0 37.0 38.0 27.0 38.0 50 35.03367774871493 38.0 36.0 38.0 26.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 14.0 4 463.0 5 1432.0 6 2243.0 7 1131.0 8 262.0 9 192.0 10 184.0 11 138.0 12 129.0 13 123.0 14 146.0 15 210.0 16 540.0 17 1517.0 18 6354.0 19 20117.0 20 39406.0 21 58101.0 22 73872.0 23 88574.0 24 104004.0 25 119284.0 26 135474.0 27 153431.0 28 174673.0 29 200248.0 30 230397.0 31 265400.0 32 312785.0 33 379486.0 34 490286.0 35 707103.0 36 1413800.0 37 5697253.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.374240066088824 18.73312448549618 13.606752932021838 24.285882516393155 2 15.210063479209031 21.531998248487746 38.10923203529394 25.14870623700927 3 17.957195827385398 26.96367147833103 30.216629777281508 24.862502917002065 4 12.761998849302561 17.748819589167482 36.37796111886454 33.11122044266542 5 13.83633202259214 37.32926296446669 34.01613630584523 14.818268707095939 6 30.963222564511028 35.88370093589308 18.678795403699063 14.47428109589683 7 26.464161469892694 32.21030601149019 23.26413005872539 18.061402459891728 8 27.363433703302885 32.10149990797306 21.186626517179423 19.34843987154463 9 27.140100562896226 14.823689785550714 20.149263591034853 37.886946060518206 10 16.85352625111799 27.797992603460465 31.34744693436452 24.001034211057025 11 33.154875459006135 23.283139479203623 22.857966685989297 20.70401837580095 12 23.39201227609098 26.04235217654452 29.481303109006625 21.084332438357876 13 28.887759552415403 20.800675402770473 26.0402760162482 24.271289028565924 14 23.75426557194391 21.205703766073057 26.22028741860682 28.819743243376212 15 25.700554769061117 26.609546180841747 24.613674433283595 23.07622461681354 16 23.679316757352435 26.760299546500875 26.328643724174704 23.231739971971983 17 23.091537616916952 26.92935517779117 26.974064540227786 23.00504266506409 18 23.90120765938112 24.74953832727142 29.265318049960378 22.083935963387084 19 23.719172393217043 26.658463213020177 28.612974150500264 21.00939024326251 20 24.723016634557 24.098161877703397 28.830624002039023 22.348197485700577 21 24.648372866534896 25.562169566259534 26.988590097524746 22.80086746968082 22 23.94680864719269 25.41161525803445 26.74019042232966 23.901385672443197 23 22.07940527651996 26.105155989173216 27.423199102915152 24.392239631391675 24 23.000140176652568 27.386751132469932 26.85846505815832 22.75464363271918 25 23.73372926890291 24.547118238117953 26.703986311549066 25.01516618143007 26 23.498680009984252 25.34669414084841 27.695954054453146 23.458671794714192 27 24.14168321007336 25.04056011991272 26.63406802706301 24.183688642950916 28 22.972046946199704 25.027667107266677 28.49446901452631 23.505816932007313 29 23.368741824124502 24.694048899700515 28.94176527693963 22.995443999235356 30 23.223120408927 25.864834987942036 28.591833265964645 22.32021133716632 31 24.724546557797062 24.738629370356794 26.837361973445233 23.69946209840091 32 22.25315278943361 25.475336898900768 27.86798924277118 24.40352106889444 33 23.02560835058984 25.70369086326284 27.600770218228497 23.66993056791882 34 22.407472599509585 25.549319289819692 27.93317530851056 24.110032802160163 35 23.36400941112444 26.04920085183251 28.302732061531565 22.284057675511484 36 23.59109579324934 25.83135181608422 27.148803903156416 23.428748487510024 37 24.182259453681514 25.775463492189616 27.49671678196659 22.545560272162284 38 24.098812823248153 25.318956295012974 27.188707202300588 23.39352367943829 39 24.230842320567355 24.53093216479613 27.201099270563816 24.0371262440727 40 23.88029409813541 25.861824699251034 27.04737360710231 23.210507595511245 41 22.2821697266883 26.341394524957025 27.36395069891743 24.012485049437245 42 25.191541101198055 26.16956590263867 27.0388213328146 21.60007166334868 43 24.560992904080283 24.1346062315472 26.822494072991958 24.48190679138056 44 23.38865482712486 25.5399823949238 27.446340031345805 23.62502274660553 45 25.219611650794597 24.802496323220545 26.930884038923146 23.047007987061708 46 22.6897525183365 25.481514030591462 28.872476770205928 22.95625668086611 47 24.16998905809419 25.240025590741627 27.774664734967146 22.815320616197035 48 24.588335194425603 26.170909900842275 26.931737908004905 22.309016996727213 49 23.29172960850761 25.94830420547592 28.624528938152977 22.135437247863493 50 23.907829671654703 26.30108600564182 26.296927827418372 23.494156495285104 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1211.0 1 1435.0 2 1659.0 3 5004.5 4 8350.0 5 9506.0 6 10662.0 7 9601.0 8 8540.0 9 11045.5 10 13551.0 11 18705.0 12 23859.0 13 42650.0 14 61441.0 15 74306.0 16 87171.0 17 82451.0 18 77731.0 19 68653.5 20 59576.0 21 67671.5 22 75767.0 23 88338.0 24 100909.0 25 114592.5 26 128276.0 27 141411.0 28 154546.0 29 174650.0 30 194754.0 31 234997.5 32 275241.0 33 297449.5 34 319658.0 35 348376.0 36 377094.0 37 409169.0 38 441244.0 39 472317.5 40 503391.0 41 531812.5 42 560234.0 43 558284.0 44 556334.0 45 619783.0 46 683232.0 47 821992.0 48 960752.0 49 978310.0 50 995868.0 51 870296.5 52 744725.0 53 641376.5 54 538028.0 55 553247.0 56 568466.0 57 538502.0 58 508538.0 59 476532.0 60 444526.0 61 383402.0 62 322278.0 63 283122.0 64 243966.0 65 207328.0 66 170690.0 67 155882.5 68 141075.0 69 121143.5 70 101212.0 71 81046.5 72 60881.0 73 58836.0 74 56791.0 75 43391.0 76 29991.0 77 25382.5 78 20774.0 79 17025.5 80 13277.0 81 11865.0 82 10453.0 83 10236.5 84 10020.0 85 7935.0 86 5850.0 87 5838.0 88 5826.0 89 3028.0 90 230.0 91 167.5 92 105.0 93 57.5 94 10.0 95 8.5 96 7.0 97 4.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04357242574333453 2 0.0 3 0.0 4 0.01656557514290969 5 0.01504854678047251 6 0.06692717102678097 7 0.06937127227737422 8 0.07476515089937308 9 0.06222625597774726 10 0.07337922375344282 11 0.06879068117570072 12 0.06527904144783689 13 0.0730982925752137 14 0.07095385124806486 15 0.06502620338743069 16 0.0684254706440029 17 0.07144079862366197 18 0.0831181712653852 19 0.064089766126667 20 0.06566298072475 21 0.06380883494843789 22 0.053929421847380955 23 0.055998948193668706 24 0.06109316689222318 25 0.06556933699867362 26 0.05584911823194652 27 0.05939821545024091 28 0.05101710196640587 29 0.06678670543766642 30 0.05766580651782808 31 0.05794673769605719 32 0.0539668793378115 33 0.06060621951662607 34 0.06188913856387232 35 0.06293794829592766 36 0.055942761958022884 37 0.05914537738983471 38 0.06933381478694367 39 0.06525094833001398 40 0.060081814650598406 41 0.07275181078873114 42 0.06227307784078544 43 0.05240302911233614 44 0.06414595236231282 45 0.015254562977840523 46 0.008334291620796849 47 0.013793720851049164 48 0.021032380876752497 49 0.11404869398840989 50 0.00954229568718201 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1.0678772E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.040184393438246 #Duplication Level Percentage of deduplicated Percentage of total 1 70.21019252743747 23.19757707405334 2 15.570842055902723 10.28926985376258 3 5.816220049692775 5.765069487439854 4 2.7209090636114444 3.5959734871799807 5 1.475102840946146 2.436883493207264 6 0.910269528559561 1.8045283842801598 7 0.597633316322429 1.3822140479668543 8 0.4084944224825274 1.0797384834011017 9 0.3080991520071854 0.9161687514401428 >10 1.6552064444095422 10.05153492355017 >50 0.1532249548085033 3.5368432804731924 >100 0.13256159260307726 9.051955145684977 >500 0.02079390884108464 4.786812530365355 >1k 0.018092695485478275 11.982211835350439 >5k 0.0015905665764331094 3.4780163862678593 >10k+ 7.66880313637392E-4 6.6452028355766375 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 85288 0.7986686109601366 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 67774 0.6346609891099838 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 51053 0.47807931473768706 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 48844 0.45739341564741715 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 44119 0.4131467550763327 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 38049 0.3563050133479767 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 32459 0.30395817047128637 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 31971 0.29938835663875957 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG 31335 0.2934326156603025 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27687 0.2592713843876431 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 22934 0.21476252138354487 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 21641 0.20265438760187032 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 21377 0.2001821932334542 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC 20525 0.19220374777174754 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC 18271 0.17109645191413395 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 16423 0.15379109133522093 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT 14078 0.13183163757031238 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 13185 0.12346925283169263 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 12849 0.12032282363552663 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 12798 0.11984524063253715 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 11406 0.10681003396270658 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 11273 0.10556457240589086 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGT 10779 0.10093857233771823 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 10744 0.10061081929645094 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCG 10690 0.10010514317563854 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.6186235645821446E-5 9.364372607636908E-6 0.0 0.0 0.0 2 6.555060825345835E-5 1.8728745215273815E-5 0.0 1.8728745215273815E-5 0.0 3 7.491498086109526E-5 2.8093117822910723E-5 0.0 5.6186235645821446E-5 0.0 4 7.491498086109526E-5 3.745749043054763E-5 0.0 1.03008098684006E-4 0.0 5 9.364372607636908E-5 3.745749043054763E-5 0.0 1.1237247129164289E-4 0.0 6 9.364372607636908E-5 3.745749043054763E-5 0.0 1.1237247129164289E-4 0.0 7 9.364372607636908E-5 3.745749043054763E-5 0.0 1.217368438992798E-4 0.0 8 9.364372607636908E-5 3.745749043054763E-5 0.0 1.311012165069167E-4 0.0 9 1.03008098684006E-4 3.745749043054763E-5 0.0 1.9665182476037507E-4 0.0 10 2.2474494258328578E-4 3.745749043054763E-5 0.0 3.371174138749287E-4 9.364372607636908E-6 11 2.9029555083674415E-4 6.555060825345835E-5 0.0 3.558461590902025E-4 9.364372607636908E-6 12 2.9965992344438105E-4 6.555060825345835E-5 0.0 3.558461590902025E-4 9.364372607636908E-6 13 3.0902429605201794E-4 6.555060825345835E-5 0.0 3.6521053169783944E-4 9.364372607636908E-6 14 3.0902429605201794E-4 7.491498086109526E-5 0.0 3.7457490430547634E-4 9.364372607636908E-6 15 3.0902429605201794E-4 7.491498086109526E-5 0.0 4.12032394736024E-4 9.364372607636908E-6 16 3.277530412672918E-4 7.491498086109526E-5 0.0 4.4948988516657157E-4 9.364372607636908E-6 17 3.558461590902025E-4 7.491498086109526E-5 9.364372607636908E-6 4.775830029894823E-4 9.364372607636908E-6 18 3.558461590902025E-4 1.03008098684006E-4 9.364372607636908E-6 5.244048660276668E-4 9.364372607636908E-6 19 3.558461590902025E-4 1.03008098684006E-4 9.364372607636908E-6 5.524979838505776E-4 9.364372607636908E-6 20 3.6521053169783944E-4 1.03008098684006E-4 9.364372607636908E-6 6.648704551422205E-4 9.364372607636908E-6 21 3.8393927691311323E-4 1.03008098684006E-4 9.364372607636908E-6 7.678785538262265E-4 1.8728745215273815E-5 22 4.307611399512978E-4 1.03008098684006E-4 9.364372607636908E-6 9.270728881560539E-4 1.8728745215273815E-5 23 4.869473755971192E-4 1.311012165069167E-4 9.364372607636908E-6 0.0015544858528677267 1.8728745215273815E-5 24 5.150404934200299E-4 1.4046558911455363E-4 9.364372607636908E-6 0.001966518247603751 1.8728745215273815E-5 25 5.431336112429407E-4 1.4046558911455363E-4 9.364372607636908E-6 0.0021257125819335782 1.8728745215273815E-5 26 6.742348277498574E-4 1.4046558911455363E-4 9.364372607636908E-6 0.0024721943684161436 1.8728745215273815E-5 27 7.304210633956789E-4 1.4046558911455363E-4 9.364372607636908E-6 0.0028374049001139833 1.8728745215273815E-5 28 7.397854360033158E-4 1.5919433432982745E-4 9.364372607636908E-6 0.003961129613030412 1.8728745215273815E-5 29 7.491498086109527E-4 1.7792307954510124E-4 9.364372607636908E-6 0.005515615465898139 1.8728745215273815E-5 30 7.491498086109527E-4 1.7792307954510124E-4 9.364372607636908E-6 0.00805336044256774 1.8728745215273815E-5 31 8.053360442567741E-4 1.7792307954510124E-4 9.364372607636908E-6 0.01133089085524066 1.8728745215273815E-5 32 8.14700416864411E-4 1.7792307954510124E-4 9.364372607636908E-6 0.015039182407864874 1.8728745215273815E-5 33 8.427935346873218E-4 1.7792307954510124E-4 9.364372607636908E-6 0.01926251445390912 1.8728745215273815E-5 34 8.802510251178693E-4 1.7792307954510124E-4 9.364372607636908E-6 0.02465639307590798 1.8728745215273815E-5 35 8.802510251178693E-4 1.7792307954510124E-4 9.364372607636908E-6 0.032634838537614626 1.8728745215273815E-5 36 8.896153977255062E-4 1.8728745215273817E-4 9.364372607636908E-6 0.04056646213628309 1.8728745215273815E-5 37 9.270728881560539E-4 1.9665182476037507E-4 9.364372607636908E-6 0.05274014652621107 1.8728745215273815E-5 38 9.364372607636908E-4 2.153805699756489E-4 9.364372607636908E-6 0.06577535319604164 1.8728745215273815E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCGTTA 3320 0.0 15.837746 42 CCGTCGT 3390 0.0 15.250119 9 CGTCGTA 3405 0.0 15.247618 10 ATACCGT 3695 0.0 15.182775 6 GTACTAG 1035 0.0 15.098603 1 TACCGTC 3550 0.0 15.05932 7 CGGCGTT 3600 0.0 14.851207 41 GTATTAG 2015 0.0 14.41842 1 AATGCGA 780 0.0 14.38228 20 ACCGTCG 3675 0.0 14.307238 8 CAATGCG 870 0.0 14.158619 19 ACGCTTC 2095 0.0 13.859453 31 CGACGAG 860 0.0 13.812228 24 TAGACCG 160 6.352315E-6 13.750215 5 GTCGTAG 3865 0.0 13.71749 11 GTAAACG 2040 0.0 13.69456 27 TGCGACG 820 0.0 13.680897 22 GCGTTAT 3900 0.0 13.606435 43 GTCCTAT 3075 0.0 13.599637 1 GCGGCGT 3940 0.0 13.45763 40 >>END_MODULE