##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2558148_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10568606 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.973674295361185 33.0 32.0 34.0 27.0 34.0 2 32.00097221904194 33.0 32.0 34.0 28.0 34.0 3 31.999787483798716 33.0 32.0 34.0 28.0 34.0 4 31.901017693345747 33.0 33.0 34.0 28.0 34.0 5 31.947417095499635 33.0 33.0 34.0 28.0 34.0 6 35.43493020744647 38.0 36.0 38.0 29.0 38.0 7 35.499059573230376 38.0 37.0 38.0 29.0 38.0 8 35.555668647312615 38.0 37.0 38.0 29.0 38.0 9 35.701807882704685 38.0 37.0 38.0 29.0 38.0 10 35.628454121574784 38.0 37.0 38.0 29.0 38.0 11 35.68701198625438 38.0 37.0 38.0 29.0 38.0 12 35.59411307413674 38.0 37.0 38.0 29.0 38.0 13 35.64915864968379 38.0 37.0 38.0 29.0 38.0 14 35.67508562624059 38.0 37.0 38.0 29.0 38.0 15 35.67629940978025 38.0 37.0 38.0 29.0 38.0 16 35.650647398531085 38.0 37.0 38.0 29.0 38.0 17 35.596726285377656 38.0 37.0 38.0 29.0 38.0 18 35.605602479645846 38.0 37.0 38.0 29.0 38.0 19 35.62562375775954 38.0 37.0 38.0 29.0 38.0 20 35.55123655853951 38.0 37.0 38.0 29.0 38.0 21 35.55977808236961 38.0 37.0 38.0 29.0 38.0 22 35.588178043537624 38.0 37.0 38.0 29.0 38.0 23 35.59227196093789 38.0 37.0 38.0 29.0 38.0 24 35.597250384771655 38.0 37.0 38.0 29.0 38.0 25 35.610506343031425 38.0 37.0 38.0 29.0 38.0 26 35.61465334217209 38.0 37.0 38.0 29.0 38.0 27 35.60744529600214 38.0 37.0 38.0 29.0 38.0 28 35.619609624959054 38.0 37.0 38.0 29.0 38.0 29 35.58407447491183 38.0 37.0 38.0 29.0 38.0 30 35.586015695920544 38.0 37.0 38.0 29.0 38.0 31 35.62412583078601 38.0 37.0 38.0 29.0 38.0 32 35.62617700006983 38.0 37.0 38.0 29.0 38.0 33 35.59157120626883 38.0 37.0 38.0 29.0 38.0 34 35.55616729396478 38.0 37.0 38.0 29.0 38.0 35 35.55185139837742 38.0 37.0 38.0 29.0 38.0 36 35.529192118619996 38.0 37.0 38.0 29.0 38.0 37 35.50918862903963 38.0 37.0 38.0 29.0 38.0 38 35.49271569022442 38.0 37.0 38.0 28.0 38.0 39 35.489728919783744 38.0 37.0 38.0 28.0 38.0 40 35.46541918584154 38.0 37.0 38.0 28.0 38.0 41 35.45613991097785 38.0 37.0 38.0 28.0 38.0 42 35.35153765785194 38.0 37.0 38.0 28.0 38.0 43 35.38811703265312 38.0 37.0 38.0 28.0 38.0 44 35.361526013932206 38.0 37.0 38.0 28.0 38.0 45 35.356382194586494 38.0 37.0 38.0 28.0 38.0 46 35.30221469132258 38.0 37.0 38.0 27.0 38.0 47 35.218082119817886 38.0 37.0 38.0 27.0 38.0 48 35.16110932700112 38.0 37.0 38.0 27.0 38.0 49 35.0678466015291 38.0 37.0 38.0 25.0 38.0 50 34.758393491062115 38.0 36.0 38.0 25.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 25.0 4 541.0 5 1489.0 6 2258.0 7 1114.0 8 269.0 9 207.0 10 181.0 11 137.0 12 117.0 13 142.0 14 111.0 15 220.0 16 581.0 17 1935.0 18 8456.0 19 25366.0 20 46406.0 21 63587.0 22 76847.0 23 89175.0 24 103019.0 25 117838.0 26 133122.0 27 151511.0 28 172773.0 29 201369.0 30 232507.0 31 266688.0 32 314546.0 33 380944.0 34 493171.0 35 710911.0 36 1415437.0 37 5555606.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.540374979150684 18.1366927763569 13.747572628047951 23.575359616444466 2 14.422375098475618 21.80954612178749 37.85070613853899 25.9173726411979 3 18.41040341554979 28.1205865749939 29.630378878728187 23.83863113072812 4 12.52770221123692 17.994309749569553 35.916431449838484 33.56155658935505 5 13.34227692771256 37.828716603354586 33.7799578630273 15.049048605905554 6 30.76270475497198 35.157550001978926 18.947898560042237 15.131846683006856 7 26.046672551779825 32.46082727470623 23.365534175334393 18.126965998179546 8 28.764406117773078 30.791811404899267 21.321518299798758 19.1222641775289 9 28.138536294951976 14.413605454027984 19.90056317614607 37.547295074873965 10 17.207513145277126 28.660278731292436 30.72983192207061 23.40237620135982 11 32.49018568141576 24.072123168988078 21.690751910312372 21.746939239283787 12 24.045767014190133 26.619238397450058 29.201392265279164 20.13360232308065 13 30.169547345054266 20.78179096758163 25.035374246412317 24.013287440951782 14 24.33349124301941 21.185328242726538 26.36937098761288 28.111809526641174 15 27.020511008901295 25.38302564815847 25.312694722595726 22.283768620344517 16 22.76874850809292 26.272600883218463 28.01042348903959 22.94822711964903 17 23.531019251526175 26.46818062552949 27.386456636129747 22.61434348681459 18 24.702432248457615 23.45502846127301 30.559759203273757 21.28278008699562 19 23.639285192855866 26.87154562870954 29.69099052815582 19.798178650278775 20 24.81595859368979 23.511340548608615 30.12831911279118 21.54438174491042 21 24.323447617395637 25.362538530962436 27.96533605210405 22.348677799537874 22 23.810211763636637 25.345867352348638 26.850981565354378 23.992939318660344 23 21.65574896187051 26.2031447647798 27.680218342103817 24.460887931245868 24 22.03817075257142 28.41151373310316 27.207163518214088 22.34315199611133 25 23.655558352946368 24.195343262734617 26.505977552848197 25.643120831470817 26 23.725219632200385 24.6093815458301 28.208873903022425 23.456524918947093 27 24.28298188644618 24.644594005801473 26.729179846595567 24.343244261156777 28 23.22464103918362 24.24278341287625 29.105105044835017 23.427470503105113 29 23.50896325891859 23.870913619065213 30.054378243476027 22.56574487854017 30 23.789969148864255 25.289192710626267 29.413707235540933 21.50713090496854 31 25.124961691353832 23.80017604225317 27.255154376861647 23.819707889531355 32 21.190347931544082 25.373024536316912 29.315895257940433 24.120732274198573 33 22.69214801209054 25.977120756297943 28.2152438346048 23.115487397006714 34 21.585423758822444 25.11126607141082 28.941610106946275 24.361700062820464 35 22.323243417252904 26.39908348087903 29.47926943579159 21.798403666076485 36 23.845262522379862 25.330913327505804 28.088667190721445 22.735156959392885 37 23.933980840635986 25.89417908065274 28.500789517584778 21.6710505611265 38 24.510026252186695 24.96503890484115 27.389850890420202 23.135083952551955 39 24.574119146842662 23.725141130227254 27.755753384786775 23.94498633814331 40 23.68570594859449 25.785959516601782 27.470924700470306 23.057409834333424 41 21.538631253559785 26.205184606869725 27.606873985920423 24.64931015365007 42 25.370484968895546 26.234757379212244 27.653867245758125 20.74089040613409 43 25.016683368180093 23.511918821651033 26.88929145032408 24.582106359844797 44 23.78352046485183 25.232385674769414 28.274212965877947 22.70988089450081 45 26.28335117513635 23.845550804471 27.30010682369472 22.57099119669793 46 22.066343138843173 24.770233042988497 30.654059402342842 22.509364415825484 47 24.767769336467595 24.654994568035825 28.572538487453485 22.00469760804309 48 24.72647509812788 26.07446646011088 27.47173706933184 21.7273213724294 49 23.18520307874482 25.575881586737715 30.06600828892836 21.172907045589106 50 23.675003347510376 26.36622189333294 26.520874506922365 23.437900252234314 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1738.0 1 2153.5 2 2569.0 3 7759.5 4 12950.0 5 14584.0 6 16218.0 7 14181.0 8 12144.0 9 15930.0 10 19716.0 11 26858.5 12 34001.0 13 60783.5 14 87566.0 15 103078.0 16 118590.0 17 108482.5 18 98375.0 19 82156.0 20 65937.0 21 70578.5 22 75220.0 23 84791.0 24 94362.0 25 110448.5 26 126535.0 27 141518.5 28 156502.0 29 175806.0 30 195110.0 31 217175.0 32 239240.0 33 260173.5 34 281107.0 35 309417.0 36 337727.0 37 362167.5 38 386608.0 39 405720.0 40 424832.0 41 446806.5 42 468781.0 43 483989.0 44 499197.0 45 589281.0 46 679365.0 47 898494.5 48 1117624.0 49 1151488.5 50 1185353.0 51 968125.5 52 750898.0 53 615956.0 54 481014.0 55 507158.5 56 533303.0 57 505987.0 58 478671.0 59 467157.5 60 455644.0 61 384038.0 62 312432.0 63 281135.5 64 249839.0 65 208149.0 66 166459.0 67 149099.5 68 131740.0 69 112608.0 70 93476.0 71 74807.0 72 56138.0 73 50493.5 74 44849.0 75 34179.0 76 23509.0 77 20114.0 78 16719.0 79 14014.5 80 11310.0 81 9978.0 82 8646.0 83 8192.0 84 7738.0 85 6154.0 86 4570.0 87 4301.5 88 4033.0 89 2094.5 90 156.0 91 119.0 92 82.0 93 46.5 94 11.0 95 5.5 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.044584877135168066 2 0.0 3 0.0 4 0.01665309502502033 5 0.015508194742050181 6 0.06929958407002779 7 0.07091758364348145 8 0.07722872817853177 9 0.0636223925842254 10 0.07540256491726534 11 0.07102166548738784 12 0.06730310506418727 13 0.0752890210875493 14 0.07301814449322834 15 0.06724633314932925 16 0.07057695215433331 17 0.0731316883229444 18 0.08510110037217775 19 0.06612035683797844 20 0.06740718690809365 21 0.06595004109340437 22 0.055693248475721394 23 0.05770865145318124 24 0.06287489570526142 25 0.0679086721560062 26 0.05734909599241375 27 0.061124428330472345 28 0.05246671131462371 29 0.06824930364515433 30 0.05934557499825426 31 0.06026338762179232 32 0.0557878683338181 33 0.06274242790392602 34 0.06397248605918321 35 0.06534447400158544 36 0.0576897274815619 37 0.061124428330472345 38 0.07173131442311313 39 0.06702870747570683 40 0.06195708308172337 41 0.07494838959840115 42 0.06409549187470892 43 0.053848161242835625 44 0.06586488322111733 45 0.01572582041567261 46 0.008913190632709745 47 0.014438990345557401 48 0.021686871475765108 49 0.11691229666429045 50 0.009944547085963843 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1.0568606E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.576399375963284 #Duplication Level Percentage of deduplicated Percentage of total 1 68.75348548699795 21.709875162269427 2 16.15720817068981 10.203729159965572 3 6.316948447331937 5.983994610309732 4 3.074616459200544 3.8834126897450605 5 1.5968795957590793 2.5211853935507746 6 0.9223225183744935 1.7474174516182346 7 0.5903352337385035 1.3048462774360736 8 0.4192764465671518 1.059139242059129 9 0.2975298575121669 0.8455429446369869 >10 1.5586237219167653 8.97694603016888 >50 0.14454603370052854 3.1907143511162555 >100 0.13097092789510717 8.596419432485153 >500 0.019155602568613275 4.179268206421318 >1k 0.015575707388570281 9.812321617950772 >5k 0.001262895179433516 2.670608400760018 >10k+ 0.001262895179433516 13.314579029506419 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 159535 1.5095179061458057 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 122457 1.158686396294838 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 86798 0.8212814443077924 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 74252 0.7025713703396645 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 70166 0.6639096963213502 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 69201 0.654778880015018 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 59167 0.5598373144007829 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG 58113 0.54986438135739 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 47668 0.4510339395753802 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 41630 0.39390246925658884 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 39151 0.3704462064344153 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38265 0.3620628870070471 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 37728 0.35698180062725393 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC 37073 0.35078419992191967 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC 32446 0.30700359158057366 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 28788 0.2723916474887984 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT 24597 0.23273646496046874 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 21645 0.20480468285032105 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 21480 0.20324345519172538 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 21448 0.20294067164581595 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGT 20092 0.19011021888790253 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG 18946 0.17926678315001998 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 17895 0.16932223606405614 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 17843 0.16883021280195326 No Hit GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTAC 17648 0.16698512556906747 No Hit GCTTTATTGAGCCTGTGTGGGAGCAGGGAGCAAGCTTTGGCCAGAGCCAA 16687 0.157892157205974 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC 15414 0.14584704927026326 No Hit GTACATGGGACTGCTGCTAGCTGGAGCTCCTCGCCCTTGCTCACTTTTTC 14260 0.13492791764590334 No Hit ATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGG 13790 0.13048078431535814 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA 13618 0.1288533227560948 No Hit GGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 13572 0.12841807140884995 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13474 0.12749079679950223 No Hit GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC 13358 0.12639320644558044 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 13202 0.1249171366592718 No Hit GGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACG 12521 0.1184735243228861 No Hit GATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT 12276 0.1161553377995168 No Hit CATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCA 12173 0.11518075326112072 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 11759 0.11126349113591708 No Hit GCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAG 10938 0.10349520078617748 No Hit GCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 10703 0.10127163412090487 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.623390066769449E-5 0.0 0.0 0.0 9.461985809670642E-6 2 6.623390066769449E-5 0.0 0.0 0.0 9.461985809670642E-6 3 7.569588647736513E-5 0.0 0.0 0.0 1.8923971619341283E-5 4 7.569588647736513E-5 0.0 0.0 9.461985809670642E-6 1.8923971619341283E-5 5 1.0408184390637705E-4 0.0 0.0 9.461985809670642E-6 1.8923971619341283E-5 6 1.3246780133538899E-4 0.0 0.0 9.461985809670642E-6 1.8923971619341283E-5 7 1.3246780133538899E-4 0.0 0.0 1.8923971619341283E-5 1.8923971619341283E-5 8 1.3246780133538899E-4 0.0 0.0 1.8923971619341283E-5 1.8923971619341283E-5 9 1.419297871450596E-4 0.0 0.0 2.8385957429011923E-5 1.8923971619341283E-5 10 2.6493560267077797E-4 0.0 0.0 5.6771914858023846E-5 1.8923971619341283E-5 11 3.69017446577155E-4 0.0 0.0 7.569588647736513E-5 1.8923971619341283E-5 12 3.69017446577155E-4 0.0 0.0 1.0408184390637705E-4 1.8923971619341283E-5 13 3.879414181964963E-4 0.0 0.0 1.2300581552571833E-4 1.8923971619341283E-5 14 3.879414181964963E-4 0.0 0.0 1.3246780133538899E-4 1.8923971619341283E-5 15 3.879414181964963E-4 0.0 0.0 2.081636878127541E-4 1.8923971619341283E-5 16 4.920232621028733E-4 0.0 0.0 2.554736168611073E-4 8.515787228703577E-5 17 5.487951769608972E-4 0.0 0.0 3.5009347495781374E-4 8.515787228703577E-5 18 5.487951769608972E-4 0.0 0.0 3.9740340400616696E-4 1.5139177295473027E-4 19 5.582571627705679E-4 0.0 0.0 4.730992904835321E-4 1.7031574457407155E-4 20 5.677191485802384E-4 0.0 0.0 5.677191485802384E-4 1.7031574457407155E-4 21 6.33953049247933E-4 0.0 0.0 7.3803489315431E-4 1.797777303837422E-4 22 6.623390066769449E-4 0.0 0.0 0.0010408184390637706 1.797777303837422E-4 23 7.474968789639806E-4 0.0 0.0 0.0015896136160246678 1.8923971619341283E-4 24 7.569588647736513E-4 0.0 0.0 0.002185718722033918 1.8923971619341283E-4 25 7.758828363929926E-4 0.0 0.0 0.002327648509178978 1.8923971619341283E-4 26 8.799646802993697E-4 0.0 0.0 0.0026493560267077795 1.9870170200308348E-4 27 9.178126235380522E-4 0.0 0.0 0.0031224553171913115 1.9870170200308348E-4 28 9.556605667767348E-4 0.0 0.0 0.005090548365602805 1.9870170200308348E-4 29 0.001002970495825088 0.0 0.0 0.007541202690307502 2.081636878127541E-4 30 0.001002970495825088 0.0 0.0 0.011590932616846536 2.081636878127541E-4 31 0.0010786663823024532 0.0 0.0 0.0161799957345368 2.081636878127541E-4 32 0.0010786663823024532 0.0 0.0 0.021185386227852567 2.081636878127541E-4 33 0.0011165143255411358 0.0 0.0 0.027203209202803093 2.081636878127541E-4 34 0.001135438297160477 0.0 0.0 0.03484849373701697 2.2708765943209538E-4 35 0.0011543622687798182 0.0 0.0 0.045464841815467436 2.2708765943209538E-4 36 0.0012016721978281716 0.0 0.0 0.0573680199640331 2.2708765943209538E-4 37 0.0012489821268765247 9.461985809670642E-6 0.0 0.07543095087469436 2.3654964524176604E-4 38 0.0012584441126861953 9.461985809670642E-6 0.0 0.09636086348568582 2.4601163105143666E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCTTTAT 4690 0.0 19.757795 1 CGACGAG 910 0.0 18.12993 24 TGCGACG 945 0.0 17.457708 22 AATGCGA 990 0.0 17.330824 20 GTCGACG 1035 0.0 17.003174 36 CAATGCG 1085 0.0 16.624557 19 TCGACGA 1085 0.0 16.219618 37 GACGAGT 1045 0.0 16.208717 25 CGACGAA 1080 0.0 16.091103 38 TTATTGA 5250 0.0 16.00803 4 GTACTAG 1360 0.0 15.860484 1 ATTGAGC 4760 0.0 15.852673 6 AGTCGAC 1160 0.0 15.550357 35 CGTCGTA 2395 0.0 15.431743 10 CAATTCG 1180 0.0 15.287878 15 CCGTCGT 2415 0.0 15.121682 9 CATTGCG 990 0.0 15.109282 29 TATTGAG 5275 0.0 14.88906 5 TTTATTG 6480 0.0 14.870542 3 TTGAGCC 5035 0.0 14.855827 7 >>END_MODULE