##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2558147_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9804226 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.841528642852584 33.0 32.0 34.0 27.0 34.0 2 31.889364443455303 33.0 32.0 34.0 27.0 34.0 3 31.8927458424561 33.0 32.0 34.0 27.0 34.0 4 31.793355538723812 33.0 32.0 34.0 28.0 34.0 5 31.841759257691532 33.0 32.0 34.0 28.0 34.0 6 35.31378550433252 38.0 36.0 38.0 29.0 38.0 7 35.37519483944985 38.0 36.0 38.0 29.0 38.0 8 35.427408446112935 38.0 37.0 38.0 29.0 38.0 9 35.59462603167246 38.0 37.0 38.0 29.0 38.0 10 35.52550543000539 38.0 37.0 38.0 29.0 38.0 11 35.58397083053777 38.0 37.0 38.0 29.0 38.0 12 35.48642677147589 38.0 37.0 38.0 29.0 38.0 13 35.54084626364182 38.0 37.0 38.0 29.0 38.0 14 35.559293308824174 38.0 37.0 38.0 29.0 38.0 15 35.54919807030152 38.0 37.0 38.0 29.0 38.0 16 35.51943223259031 38.0 37.0 38.0 29.0 38.0 17 35.46865525131714 38.0 37.0 38.0 28.0 38.0 18 35.472441475747296 38.0 37.0 38.0 28.0 38.0 19 35.48818142299045 38.0 37.0 38.0 28.0 38.0 20 35.414051858861676 38.0 37.0 38.0 28.0 38.0 21 35.43083798761881 38.0 37.0 38.0 28.0 38.0 22 35.467536142067715 38.0 37.0 38.0 28.0 38.0 23 35.473648914253914 38.0 37.0 38.0 28.0 38.0 24 35.47529657109087 38.0 37.0 38.0 28.0 38.0 25 35.489127647608285 38.0 37.0 38.0 28.0 38.0 26 35.489142539145874 38.0 37.0 38.0 28.0 38.0 27 35.48962610613015 38.0 37.0 38.0 28.0 38.0 28 35.50076538423329 38.0 37.0 38.0 28.0 38.0 29 35.466750970448864 38.0 37.0 38.0 28.0 38.0 30 35.474335352938624 38.0 37.0 38.0 28.0 38.0 31 35.51206275742726 38.0 37.0 38.0 28.0 38.0 32 35.51854537012917 38.0 37.0 38.0 29.0 38.0 33 35.490992659695934 38.0 37.0 38.0 28.0 38.0 34 35.46639377754042 38.0 37.0 38.0 28.0 38.0 35 35.46621048923189 38.0 37.0 38.0 28.0 38.0 36 35.44055165598998 38.0 37.0 38.0 28.0 38.0 37 35.430888374054206 38.0 37.0 38.0 28.0 38.0 38 35.42472562341994 38.0 37.0 38.0 28.0 38.0 39 35.42925622073584 38.0 37.0 38.0 28.0 38.0 40 35.418167635058595 38.0 37.0 38.0 28.0 38.0 41 35.411816496274156 38.0 37.0 38.0 28.0 38.0 42 35.31438463372835 38.0 37.0 38.0 27.0 38.0 43 35.361866607318106 38.0 37.0 38.0 28.0 38.0 44 35.34273087952073 38.0 37.0 38.0 28.0 38.0 45 35.35732907421759 38.0 37.0 38.0 28.0 38.0 46 35.317846916217555 38.0 37.0 38.0 27.0 38.0 47 35.25277609879658 38.0 37.0 38.0 27.0 38.0 48 35.20829018017333 38.0 37.0 38.0 27.0 38.0 49 35.12122711165573 38.0 37.0 38.0 27.0 38.0 50 34.81016186285383 38.0 36.0 38.0 25.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 16.0 4 514.0 5 1380.0 6 1968.0 7 968.0 8 250.0 9 188.0 10 160.0 11 117.0 12 132.0 13 116.0 14 125.0 15 215.0 16 527.0 17 1730.0 18 8760.0 19 25997.0 20 46433.0 21 62947.0 22 75689.0 23 88333.0 24 101471.0 25 114779.0 26 130600.0 27 147645.0 28 167981.0 29 191620.0 30 219566.0 31 251335.0 32 295804.0 33 358202.0 34 463355.0 35 664715.0 36 1324121.0 37 5056467.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.71683205718567 18.436700154296908 13.554005500239441 24.292462288277974 2 15.0823940614996 21.418172122919238 37.616860321253306 25.882573494327854 3 18.166441695652466 27.251421988844406 29.41577438137391 25.16636193412922 4 12.700644846431228 17.715893793552027 35.93691661147748 33.64654474853927 5 13.959924147900779 37.180586163428856 33.69849576053114 15.160993928139224 6 31.438770338220678 35.42742643518071 18.467146222077336 14.666657004521271 7 26.78124412478033 31.88174623215337 23.096469652583014 18.240539990483292 8 28.090937504401907 31.45489554737926 20.998691216246147 19.455475731972683 9 27.513251705190346 14.453357784150167 19.880828803492243 38.152561707167244 10 17.2031022317271 27.68497457812923 30.82218612982078 24.289737060322896 11 33.44325914412805 23.390497816946887 22.05022966533255 21.116013373592512 12 23.834900652531978 25.93271125026205 29.15955710211053 21.072830995095444 13 29.67264263933837 20.607153815171436 25.253344808812223 24.466858736677978 14 24.15957607730653 20.817426671830017 25.94731097211077 29.075686278752688 15 26.260828509237164 25.867242683430046 24.433215692034068 23.438713115298714 16 23.717994648023545 26.178478963311257 26.6500583516084 23.453468037056794 17 23.433828032499083 26.46898093332789 26.866002531335482 23.231188502837547 18 24.72460973746894 24.028904161636603 29.172258178715648 22.07422792217881 19 23.91395293747583 26.53985966709284 28.353089262110675 21.19309813332065 20 24.763794009351482 23.722428005295882 28.837696692034253 22.676081293318383 21 24.904219838460218 25.267468997111436 26.976457747624554 22.851853416803788 22 24.323750353353464 24.89303467609351 26.46661843030441 24.316596540248618 23 22.299194672296778 25.66397285203083 27.310336916649725 24.726495559022666 24 22.875252532726556 27.46982492254983 26.526236613022654 23.128685931700964 25 23.99062725306417 24.143304883316283 26.31862685460607 25.547441009013482 26 23.69861102649207 25.041517758415583 27.46991244557125 23.789958769521103 27 24.422357264071724 24.781465302041834 26.245769226215916 24.550408207670525 28 23.372188248620436 24.43299121618691 28.241548481903 23.953272053289655 29 23.685337001139658 24.024039563643726 28.959870304016803 23.330753131199806 30 23.830324220779154 25.090559132608124 28.596785041082523 22.482331605530195 31 25.248665053770353 24.051168125151936 26.62457664533488 24.075590175742832 32 22.271205958519612 25.043494482670788 27.95762482161343 24.72767473719617 33 23.184849874080303 25.403743176883193 27.503268931738013 23.908138017298498 34 22.434028160504262 24.94608149318441 28.03364318869334 24.58624715761799 35 23.311860695560778 25.843180444763963 28.460915339183273 22.384043520491982 36 24.13373592795751 25.24433416306307 26.97297916790194 23.648950741077478 37 24.22925018571885 25.632171250589252 27.49475858998799 22.643819973703906 38 24.335341899987835 24.90573999057706 26.93413169741098 23.824786412024128 39 24.503121866332577 23.991743065425233 26.957707450378017 24.547427617864166 40 24.17219090510693 25.662811657573627 26.755099387304003 23.40989805001544 41 22.433622808521758 25.93655838906445 27.067338706384785 24.562480096029006 42 25.55499331709623 26.12087646058393 26.885164688467277 21.43896553385256 43 25.16648649784986 23.561958428405422 26.388083121146412 24.883471952598306 44 23.677196188273985 25.22165802406538 27.34654585804252 23.754599929618117 45 25.647050422461216 24.22859066530309 26.7650411749854 23.35931773725029 46 22.882834324455498 24.758516615619573 29.122599319458235 23.236049740466694 47 24.80034553354135 24.77969839467475 27.66612556337157 22.75383050841233 48 24.9725416262417 26.009175575462834 26.55390523060851 22.46437756768696 49 23.5935886801928 25.544628177740137 28.58570518176771 22.276077960299354 50 24.125220997552248 26.10309043629905 25.875411444092773 23.896277122055935 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1109.0 1 1442.5 2 1776.0 3 5088.0 4 8400.0 5 9568.5 6 10737.0 7 9581.0 8 8425.0 9 11116.5 10 13808.0 11 18846.0 12 23884.0 13 42905.0 14 61926.0 15 73806.0 16 85686.0 17 79387.0 18 73088.0 19 61277.5 20 49467.0 21 53980.5 22 58494.0 23 65552.5 24 72611.0 25 86169.5 26 99728.0 27 112879.5 28 126031.0 29 146697.5 30 167364.0 31 189313.0 32 211262.0 33 233221.5 34 255181.0 35 284557.5 36 313934.0 37 346677.0 38 379420.0 39 404537.5 40 429655.0 41 452314.5 42 474974.0 43 489999.0 44 505024.0 45 577883.5 46 650743.0 47 802229.5 48 953716.0 49 970366.5 50 987017.0 51 826414.0 52 665811.0 53 571705.5 54 477600.0 55 503342.0 56 529084.0 57 511758.5 58 494433.0 59 466401.0 60 438369.0 61 378644.5 62 318920.0 63 278627.5 64 238335.0 65 205060.0 66 171785.0 67 156115.0 68 140445.0 69 120630.0 70 100815.0 71 79448.5 72 58082.0 73 56422.0 74 54762.0 75 41895.0 76 29028.0 77 24422.0 78 19816.0 79 16534.5 80 13253.0 81 11790.5 82 10328.0 83 9719.5 84 9111.0 85 7265.5 86 5420.0 87 5238.5 88 5057.0 89 2627.0 90 197.0 91 149.0 92 101.0 93 56.5 94 12.0 95 6.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.043746441585495885 2 0.0 3 0.0 4 0.016135898948065865 5 0.014942536004371992 6 0.06670592864750365 7 0.0685418716378019 8 0.07490647400416922 9 0.06173868289041888 10 0.07292773544795887 11 0.06842967512172812 12 0.06519637552214728 13 0.07245855001710487 14 0.07107139309110173 15 0.06490058470704368 16 0.06858267037091964 17 0.07166297472130896 18 0.0829030256952461 19 0.06363582398039376 20 0.06550236602053033 21 0.06393161479549737 22 0.053609535316709346 23 0.05591466373786161 24 0.06110630252709393 25 0.06586955461858998 26 0.055149687491904006 27 0.05897456872169206 28 0.05049863191648173 29 0.06674672738062137 30 0.05768940862848327 31 0.05817899342589614 32 0.053874727081974653 33 0.06036172564769519 34 0.06227926610422893 35 0.06298304425050993 36 0.055618872922758 37 0.05929075890335453 38 0.0699494279303639 39 0.0652881726716622 40 0.06009653388242989 41 0.07329492404601853 42 0.06211607117175798 43 0.05184499010936713 44 0.06374802049646754 45 0.015819708766403387 46 0.008771727620313934 47 0.014432551840400253 48 0.02158252981928405 49 0.11204352082459135 50 0.009689699115463066 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 9804226.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.19161916063072 #Duplication Level Percentage of deduplicated Percentage of total 1 69.63728158996567 23.113741299157418 2 15.479089691792014 10.275521000064106 3 5.984155499587888 5.9587143102094515 4 2.7653576242643667 3.671467884301177 5 1.5628908774697636 2.593743939730019 6 0.9648662621999485 1.9215284109529176 7 0.6180876476471712 1.4360730866016516 8 0.4826672241718728 1.2816405348825264 9 0.3356890226930406 1.0027855977868558 >10 1.8406068337225825 11.368312803367164 >50 0.1660387196064475 3.858710216638767 >100 0.13077222785399162 8.643030578943979 >500 0.015986771749473255 3.621141446157303 >1k 0.014164660466889429 9.61322603297114 >5k 0.00151213149512216 3.406688392546369 >10k+ 8.332153136387412E-4 8.233674465689221 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 99758 1.0175000045898575 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 77902 0.7945757268345304 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 59790 0.6098390632774071 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 51295 0.5231927538186084 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 49396 0.5038235552709617 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 45116 0.46016891083498074 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 37342 0.3808765730206546 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG 37101 0.37841844935031077 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 33031 0.3369057384030111 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27738 0.28291881480496267 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 26435 0.2696286274918591 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 26095 0.2661607351768513 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 24715 0.2520851722512313 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC 23667 0.24139590417438356 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC 21253 0.21677386873782795 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 19963 0.20361627730735707 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT 16409 0.16736660293224576 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 15393 0.15700372472034 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 15267 0.1557185646271312 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 15080 0.15381122385387688 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGT 12809 0.13064774312628044 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 12451 0.12699625651224278 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 12233 0.12477272555732599 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG 12077 0.12318157496573416 No Hit GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTAC 11315 0.11540941630680485 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC 10161 0.10363898180233708 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 10052 0.10252721632487867 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 9981 0.10180303881203881 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.0998416397174033E-5 0.0 0.0 0.0 0.0 2 5.0998416397174033E-5 0.0 0.0 0.0 0.0 3 6.119809967660884E-5 0.0 0.0 0.0 0.0 4 6.119809967660884E-5 0.0 0.0 1.0199683279434807E-5 0.0 5 1.0199683279434807E-4 0.0 0.0 2.0399366558869615E-5 0.0 6 1.3259588263265249E-4 0.0 0.0 2.0399366558869615E-5 0.0 7 1.3259588263265249E-4 0.0 0.0 2.0399366558869615E-5 0.0 8 1.3259588263265249E-4 0.0 0.0 2.0399366558869615E-5 0.0 9 1.3259588263265249E-4 0.0 0.0 5.0998416397174033E-5 0.0 10 3.8758796461852265E-4 0.0 0.0 8.159746623547846E-5 0.0 11 4.3858638101569673E-4 1.0199683279434807E-5 0.0 9.179714951491326E-5 0.0 12 4.997844806923056E-4 2.0399366558869615E-5 0.0 1.0199683279434807E-4 0.0 13 4.997844806923056E-4 2.0399366558869615E-5 2.0399366558869615E-5 1.1219651607378288E-4 1.0199683279434807E-5 14 5.201838472511752E-4 2.0399366558869615E-5 2.0399366558869615E-5 1.2239619935321767E-4 1.0199683279434807E-5 15 5.303835305306099E-4 2.0399366558869615E-5 2.0399366558869615E-5 1.427955659120873E-4 1.0199683279434807E-5 16 5.81381946927784E-4 2.0399366558869615E-5 2.0399366558869615E-5 1.529952491915221E-4 1.0199683279434807E-5 17 6.527797298838277E-4 2.0399366558869615E-5 2.0399366558869615E-5 2.2439303214756576E-4 1.0199683279434807E-5 18 7.139778295604365E-4 2.0399366558869615E-5 2.0399366558869615E-5 2.3459271542700057E-4 1.0199683279434807E-5 19 7.547765626781757E-4 3.059904983830442E-5 2.0399366558869615E-5 2.6519176526530497E-4 1.0199683279434807E-5 20 7.751759292370453E-4 3.059904983830442E-5 2.0399366558869615E-5 3.059904983830442E-4 1.0199683279434807E-5 21 8.669730787519586E-4 3.059904983830442E-5 2.0399366558869615E-5 3.8758796461852265E-4 1.0199683279434807E-5 22 9.077718118696978E-4 3.059904983830442E-5 2.0399366558869615E-5 6.425800466043929E-4 1.0199683279434807E-5 23 9.995689613846112E-4 3.059904983830442E-5 2.0399366558869615E-5 0.0011831632604144375 1.0199683279434807E-5 24 0.0010709667443406547 3.059904983830442E-5 2.0399366558869615E-5 0.0014891537587974819 1.0199683279434807E-5 25 0.0010913661108995245 3.059904983830442E-5 2.0399366558869615E-5 0.0016013502748712647 1.0199683279434807E-5 26 0.0011423645272966984 3.059904983830442E-5 2.0399366558869615E-5 0.0018767417234160045 1.0199683279434807E-5 27 0.0012035626269733073 3.059904983830442E-5 2.0399366558869615E-5 0.002213331271637353 1.0199683279434807E-5 28 0.0012239619935321769 3.059904983830442E-5 2.0399366558869615E-5 0.003661686297317096 1.0199683279434807E-5 29 0.0012749604099293508 4.079873311773923E-5 2.0399366558869615E-5 0.0054364311879387525 1.0199683279434807E-5 30 0.0012851600932087858 4.079873311773923E-5 2.0399366558869615E-5 0.008057749790753497 1.0199683279434807E-5 31 0.001366757559444264 4.079873311773923E-5 2.0399366558869615E-5 0.011872431337262115 1.0199683279434807E-5 32 0.001366757559444264 4.079873311773923E-5 2.0399366558869615E-5 0.015748310983447342 1.0199683279434807E-5 33 0.001376957242723699 4.079873311773923E-5 2.0399366558869615E-5 0.020052577327368832 1.0199683279434807E-5 34 0.0014075562925620034 4.079873311773923E-5 2.0399366558869615E-5 0.0256114047146608 1.0199683279434807E-5 35 0.0014075562925620034 4.079873311773923E-5 2.0399366558869615E-5 0.03348556020638447 1.0199683279434807E-5 36 0.001427955659120873 4.079873311773923E-5 2.0399366558869615E-5 0.04323645742152415 1.0199683279434807E-5 37 0.001427955659120873 8.159746623547846E-5 2.0399366558869615E-5 0.05695503143236396 1.0199683279434807E-5 38 0.001427955659120873 8.159746623547846E-5 2.0399366558869615E-5 0.07135698422292591 1.0199683279434807E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTAG 2140 0.0 15.8389435 1 TTAACGG 645 0.0 15.688934 35 AATGCGA 645 0.0 15.34646 20 CTAACGC 555 0.0 15.063344 3 CGTCGTA 2925 0.0 14.966886 10 GGCGTTA 3040 0.0 14.764036 42 TGCGACG 645 0.0 14.664395 22 GACCGTC 935 0.0 14.350719 22 ATACCGT 3375 0.0 14.340569 6 CCGTCGT 3145 0.0 14.33954 9 GGCGTCG 985 0.0 14.070827 8 TACCGTC 3235 0.0 14.009107 7 TAGGTCG 650 0.0 13.874987 21 GCGTCGG 1010 0.0 13.722118 9 GTCGTAG 3235 0.0 13.600658 11 GTCCTAT 2725 0.0 13.407902 1 GTACTAG 975 0.0 13.318847 1 GTCGACG 745 0.0 13.287481 36 GCATTCG 3710 0.0 13.280963 22 CGGGCGT 1035 0.0 13.178586 6 >>END_MODULE