##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2558134_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10077264 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.218403328522506 33.0 33.0 34.0 30.0 34.0 2 32.24891418940697 33.0 33.0 34.0 30.0 34.0 3 32.250042968011954 33.0 33.0 34.0 30.0 34.0 4 32.216154900774654 33.0 33.0 34.0 30.0 34.0 5 32.23742277665843 33.0 33.0 34.0 31.0 34.0 6 35.81569173934513 38.0 37.0 38.0 31.0 38.0 7 35.92590330073718 38.0 37.0 38.0 31.0 38.0 8 35.926452656197156 38.0 37.0 38.0 31.0 38.0 9 36.062305998929865 38.0 38.0 38.0 31.0 38.0 10 35.996170091405766 38.0 37.0 38.0 31.0 38.0 11 36.075048346455944 38.0 38.0 38.0 31.0 38.0 12 36.02503427517628 38.0 38.0 38.0 31.0 38.0 13 36.06846560733151 38.0 38.0 38.0 31.0 38.0 14 36.085355310727195 38.0 38.0 38.0 32.0 38.0 15 36.049091003272316 38.0 38.0 38.0 31.0 38.0 16 36.039467855560794 38.0 38.0 38.0 31.0 38.0 17 35.98576091685204 38.0 38.0 38.0 31.0 38.0 18 35.999177951475716 38.0 38.0 38.0 31.0 38.0 19 35.92983809891256 38.0 38.0 38.0 31.0 38.0 20 35.919800354540676 38.0 37.0 38.0 31.0 38.0 21 35.93555919543241 38.0 37.0 38.0 31.0 38.0 22 35.971696186583976 38.0 38.0 38.0 31.0 38.0 23 35.963279715605346 38.0 38.0 38.0 31.0 38.0 24 35.87752657864277 38.0 38.0 38.0 31.0 38.0 25 35.93703687826378 38.0 38.0 38.0 31.0 38.0 26 35.89060612086773 38.0 37.0 38.0 31.0 38.0 27 35.89216467882552 38.0 37.0 38.0 31.0 38.0 28 35.86761734137361 38.0 37.0 38.0 31.0 38.0 29 35.90553378377306 38.0 37.0 38.0 31.0 38.0 30 35.87627911703018 38.0 37.0 38.0 31.0 38.0 31 35.941961627679895 38.0 37.0 38.0 31.0 38.0 32 35.95208858277405 38.0 37.0 38.0 31.0 38.0 33 35.91679854770104 38.0 37.0 38.0 31.0 38.0 34 35.91786153463877 38.0 37.0 38.0 31.0 38.0 35 35.845497051580665 38.0 37.0 38.0 31.0 38.0 36 35.864893288495765 38.0 37.0 38.0 31.0 38.0 37 35.81499532015833 38.0 37.0 38.0 30.0 38.0 38 35.79714702323964 38.0 37.0 38.0 29.0 38.0 39 35.78663802000226 38.0 37.0 38.0 29.0 38.0 40 35.77370276297217 38.0 37.0 38.0 29.0 38.0 41 35.76298298823966 38.0 37.0 38.0 29.0 38.0 42 35.7249887469456 38.0 37.0 38.0 29.0 38.0 43 35.77685808370209 38.0 37.0 38.0 29.0 38.0 44 35.72557769648587 38.0 37.0 38.0 29.0 38.0 45 35.76244196837554 38.0 37.0 38.0 29.0 38.0 46 35.727063020280106 38.0 37.0 38.0 29.0 38.0 47 35.62849033229654 38.0 37.0 38.0 29.0 38.0 48 35.640849937046404 38.0 37.0 38.0 29.0 38.0 49 35.529419691694095 38.0 37.0 38.0 29.0 38.0 50 35.225197136841906 38.0 36.0 38.0 27.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 7.0 4 190.0 5 560.0 6 1282.0 7 605.0 8 308.0 9 248.0 10 207.0 11 169.0 12 154.0 13 150.0 14 182.0 15 178.0 16 327.0 17 1290.0 18 6553.0 19 20123.0 20 35315.0 21 47374.0 22 57498.0 23 67303.0 24 77560.0 25 89436.0 26 103339.0 27 117983.0 28 136650.0 29 159657.0 30 186240.0 31 217743.0 32 261354.0 33 326412.0 34 432974.0 35 661897.0 36 1439914.0 37 5626082.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.26304093988691 18.50378541408764 13.531193918481549 24.70197972754389 2 14.953572715768884 21.225602504806858 37.925948948047804 25.894875831376453 3 18.176584963691425 26.938771095322387 29.183206423508672 25.701437517477515 4 12.799292409718827 17.591851081341723 35.99708763048751 33.61176887845193 5 14.115555987926912 36.99164503017528 33.70092950466291 15.191869477234905 6 31.579054475279843 35.56572850114557 18.211396963933307 14.64382005964128 7 26.91576643069254 31.721792280673043 23.02995826183179 18.332483026802628 8 27.669321710380977 32.068754793599105 20.877450165185255 19.384473330834666 9 27.431315427294006 14.757401119016592 19.77867879632941 38.03260465736 10 17.190042337056347 27.62875448588214 30.956471540619457 24.22473163644206 11 33.539074670344235 23.486899652199643 22.135105000362394 20.83892067709373 12 23.79374723363848 25.778855496294938 29.002290929590803 21.425106340475782 13 29.46240553583533 20.807113418150383 25.021036158366634 24.709444887647656 14 24.01995875579621 20.721435043357243 25.755449648288575 29.503156552557968 15 25.957878544700204 26.06625729980314 24.12384985962891 23.852014295867747 16 23.79350891175451 26.34077399212371 26.193177959892637 23.672539136229144 17 23.59325046538638 26.444906700839176 26.640363521093857 23.32147931268058 18 24.778167643338307 24.484952690755772 28.428864074769468 22.308015591136453 19 24.12364974107833 26.63259255670204 27.62552607425982 21.61823162795981 20 24.723317171700323 24.210916558594807 28.144950725784206 22.92081554392066 21 24.95116499664208 25.483617180430656 26.475456421268106 23.089761401659153 22 24.364895088011068 25.178529874045253 25.98118462111519 24.47539041682849 23 22.50530201608175 25.817837035601325 26.854588578545354 24.82227236977157 24 23.080884877861564 27.45891317277201 26.105866514631664 23.354335434734764 25 24.18767007671441 24.310482230808812 25.948143089165498 25.553704603311285 26 23.822538336116978 25.243254109080805 26.89295171349228 24.04125584130994 27 24.490149260902943 25.057652221073596 25.795840899427265 24.656357618596196 28 23.566376862928305 24.729089527574704 27.53073634398577 24.173797265511222 29 23.839732861629255 24.45208380199627 28.184910883390835 23.523272452983633 30 24.00315726388597 25.364064670501037 27.877089476028612 22.755688589584384 31 25.283168308181793 24.271166491012238 26.229289786919395 24.216375413886574 32 22.58348100159433 25.2844129917363 27.394645466629886 24.737460540039482 33 23.325615915187086 25.504993225461543 27.09282313863488 24.076567720716486 34 22.68253972350838 25.18422086610163 27.460181192129134 24.673058218260852 35 23.44698727314928 25.935959314740725 27.819860431325854 22.797192980784143 36 24.225650945015538 25.408127799746826 26.586663428971423 23.779557826266213 37 24.362782469891716 25.666045242831785 26.96133671642028 23.009835570856215 38 24.43655139630572 25.227581490713863 26.43450899067514 23.90135812230527 39 24.485055817058406 24.371698203870558 26.504316484766317 24.63892949430472 40 24.2861617316313 25.784179461126204 26.333695521066367 23.59596328617613 41 22.811265234156277 25.997958851397236 26.630158963382428 24.560616951064056 42 25.565930637576944 26.18310103154602 26.336584515938803 21.914383814938233 43 25.072140352075493 23.930175406339853 26.058784881073905 24.93889936051075 44 23.869347207588973 25.435055460853768 26.93011047894594 23.765486852611314 45 25.568874646927974 24.41300535542187 26.431936287468506 23.58618371018165 46 23.114259981677566 24.940172253103622 28.478761695634848 23.466806069583967 47 24.8755912319058 24.99061253133787 27.122520557167107 23.01127567958922 48 24.92090114935959 26.095972081310958 26.223655547775664 22.759471221553788 49 23.79464856972988 25.673227272831056 27.90287241320055 22.62925174423851 50 24.213508234985888 26.20043427691306 25.563359175588396 24.022698312512652 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1016.0 1 1210.5 2 1405.0 3 3917.0 4 6429.0 5 7291.0 6 8153.0 7 7261.0 8 6369.0 9 8242.5 10 10116.0 11 14492.5 12 18869.0 13 34510.0 14 50151.0 15 62011.0 16 73871.0 17 69957.5 18 66044.0 19 59073.0 20 52102.0 21 56744.5 22 61387.0 23 71322.5 24 81258.0 25 95760.0 26 110262.0 27 124339.0 28 138416.0 29 160625.5 30 182835.0 31 204810.0 32 226785.0 33 248272.5 34 269760.0 35 298544.0 36 327328.0 37 359008.5 38 390689.0 39 417770.5 40 444852.0 41 466134.0 42 487416.0 43 500028.5 44 512641.0 45 578833.0 46 645025.0 47 786564.5 48 928104.0 49 948634.0 50 969164.0 51 827155.5 52 685147.0 53 596414.0 54 507681.0 55 527401.0 56 547121.0 57 533095.0 58 519069.0 59 488634.0 60 458199.0 61 404713.5 62 351228.0 63 309835.5 64 268443.0 65 231344.5 66 194246.0 67 174183.0 68 154120.0 69 131190.5 70 108261.0 71 86135.5 72 64010.0 73 60395.0 74 56780.0 75 44274.5 76 31769.0 77 26119.0 78 20469.0 79 16697.0 80 12925.0 81 11314.5 82 9704.0 83 9098.0 84 8492.0 85 6605.0 86 4718.0 87 4436.5 88 4155.0 89 2170.0 90 185.0 91 136.0 92 87.0 93 44.5 94 2.0 95 2.5 96 3.0 97 3.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03176457419394788 2 0.0 3 2.9769985186455373E-4 4 0.0024411387852893403 5 0.03591252546326066 6 0.0367560083768769 7 0.063370375133568 8 0.05198831746394656 9 0.05166084762689556 10 0.05899418731115906 11 0.053526433365246755 12 0.053288273483755116 13 0.04100319293014453 14 0.040596336465929646 15 0.06055214986925023 16 0.04465497777968305 17 0.04416873468830429 18 0.050916597997234164 19 0.0544989195480043 20 0.05221655401704271 21 0.040278789957274116 22 0.04405957807595395 23 0.06048268657048183 24 0.04113219619928584 25 0.04932886545395655 26 0.035118659191621854 27 0.043315328446292566 28 0.03979254686589535 29 0.0424916921894673 30 0.039544463656008215 31 0.04421835133028171 32 0.03418586632244625 33 0.034880499310130215 34 0.0372918681102331 35 0.04197567911290207 36 0.0422237623227892 37 0.035962142105238085 38 0.047909829493402174 39 0.04679841671310784 40 0.04186652250055174 41 0.044694671093265 42 0.04484352101919727 43 0.04503206425871149 44 0.04091388297458516 45 0.0 46 0.0 47 0.0 48 0.0 49 0.03926661046093464 50 0.007382956326240931 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1.0077264E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.935293294820404 #Duplication Level Percentage of deduplicated Percentage of total 1 69.90612750443852 24.42191067472671 2 15.349077988713136 10.724490826815309 3 5.842740714380503 6.123535815074141 4 2.7368062161488735 3.824445114089942 5 1.5401158587954002 2.690219961751076 6 0.9566127219186489 2.0051727605870684 7 0.6578478748764309 1.60874759165277 8 0.4689700112646402 1.3106883912004348 9 0.3368932391816737 1.0592517707868465 >10 1.8725831185534711 12.090820825451148 >50 0.17596298457527557 4.320053284876225 >100 0.12917196848996534 8.983045454316272 >500 0.013847037708823937 3.3128547504736074 >1k 0.011551585915396524 8.214298608890882 >5k 9.74575446333462E-4 2.3221509854461724 >10k+ 7.165995928922515E-4 6.988313183861562 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 89635 0.8894775407293091 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 70036 0.6949902275061961 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 55538 0.5511218124284528 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 46749 0.46390567916053405 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 40656 0.40344283924684315 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 40551 0.40240088976531724 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG 33853 0.3359344361723579 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 32987 0.3273408337818678 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25381 0.25186399800580794 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 24130 0.23944991418305603 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 22951 0.2277503100047791 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 21965 0.21796590820683076 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC 21820 0.2165270255894854 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21457 0.2129248573819243 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 18602 0.18459375481281426 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC 18214 0.18074350339536605 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT 15021 0.14905831582858203 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 14557 0.14445389145307694 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 14417 0.14306462547770904 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 13728 0.13622745221321977 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGT 11720 0.11630140879508565 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 11480 0.11391980998016922 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 11136 0.11050618501212235 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG 10790 0.1070727133872845 No Hit GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTAC 10491 0.10410563819703443 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9846656790970246E-5 0.0 0.0 0.0 0.0 2 1.9846656790970246E-5 0.0 0.0 0.0 0.0 3 1.9846656790970246E-5 0.0 0.0 0.0 1.9846656790970246E-5 4 1.9846656790970246E-5 0.0 0.0 9.923328395485123E-6 1.9846656790970246E-5 5 1.9846656790970246E-5 0.0 0.0 9.923328395485123E-6 1.9846656790970246E-5 6 2.976998518645537E-5 0.0 0.0 9.923328395485123E-6 2.976998518645537E-5 7 2.976998518645537E-5 0.0 0.0 9.923328395485123E-6 2.976998518645537E-5 8 3.969331358194049E-5 0.0 0.0 9.923328395485123E-6 4.961664197742562E-5 9 3.969331358194049E-5 0.0 0.0 1.9846656790970246E-5 4.961664197742562E-5 10 5.953997037291074E-5 0.0 0.0 6.946329876839587E-5 6.946329876839587E-5 11 8.930995555936611E-5 0.0 0.0 6.946329876839587E-5 6.946329876839587E-5 12 9.923328395485124E-5 0.0 0.0 8.930995555936611E-5 6.946329876839587E-5 13 9.923328395485124E-5 0.0 0.0 8.930995555936611E-5 6.946329876839587E-5 14 9.923328395485124E-5 0.0 0.0 9.923328395485124E-5 6.946329876839587E-5 15 9.923328395485124E-5 0.0 0.0 9.923328395485124E-5 1.0915661235033635E-4 16 1.3892659753679174E-4 0.0 0.0 1.290032691413066E-4 1.4884992593227687E-4 17 1.4884992593227687E-4 0.0 0.0 1.686965827232471E-4 1.4884992593227687E-4 18 1.5877325432776197E-4 9.923328395485123E-6 0.0 1.8854323951421735E-4 1.686965827232471E-4 19 1.5877325432776197E-4 9.923328395485123E-6 0.0 2.480832098871281E-4 1.686965827232471E-4 20 1.686965827232471E-4 9.923328395485123E-6 0.0 2.778531950735835E-4 1.7861991111873222E-4 21 1.9846656790970248E-4 9.923328395485123E-6 0.0 3.1754650865552394E-4 2.183132247006727E-4 22 1.9846656790970248E-4 9.923328395485123E-6 0.0 5.060897481697413E-4 2.183132247006727E-4 23 2.083898963051876E-4 1.9846656790970246E-5 0.0 6.251696889155628E-4 2.183132247006727E-4 24 2.2823655309615784E-4 1.9846656790970246E-5 0.0 8.83176227198176E-4 2.183132247006727E-4 25 2.2823655309615784E-4 1.9846656790970246E-5 0.0 0.0010221028247349678 2.2823655309615784E-4 26 3.373931654464942E-4 1.9846656790970246E-5 0.0 0.001190799407458215 2.3815988149164297E-4 27 3.5723982223746445E-4 1.9846656790970246E-5 0.0 0.0015480392296956793 2.480832098871281E-4 28 4.167797926103752E-4 1.9846656790970246E-5 0.0 0.0025899887112216173 2.480832098871281E-4 29 4.366264494013454E-4 1.9846656790970246E-5 0.0 0.0038006347754708024 2.480832098871281E-4 30 4.4654977779683055E-4 1.9846656790970246E-5 0.0 0.005715837155799431 2.480832098871281E-4 31 4.564731061923157E-4 1.9846656790970246E-5 0.0 0.008960765541123067 2.480832098871281E-4 32 4.564731061923157E-4 1.9846656790970246E-5 0.0 0.012096537314096366 2.480832098871281E-4 33 4.564731061923157E-4 1.9846656790970246E-5 0.0 0.015926942074753623 2.480832098871281E-4 34 4.564731061923157E-4 1.9846656790970246E-5 0.0 0.020660369719400027 2.480832098871281E-4 35 4.663964345878008E-4 1.9846656790970246E-5 0.0 0.027031146549301478 2.480832098871281E-4 36 4.961664197742562E-4 1.9846656790970246E-5 0.0 0.034701879399011475 2.480832098871281E-4 37 5.259364049607115E-4 1.9846656790970246E-5 0.0 0.04581600720195481 2.480832098871281E-4 38 5.457830617516818E-4 1.9846656790970246E-5 0.0 0.05867664080250354 2.9769985186455373E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCGTTA 2450 0.0 16.51931 42 GTACTAG 1100 0.0 16.406088 1 AATGCGA 775 0.0 16.180704 20 TCGACGA 640 0.0 15.810595 37 CGTCGTA 2535 0.0 15.797282 10 CGACGAA 630 0.0 15.712392 38 CCGTCGT 2625 0.0 15.33956 9 GTCGACG 625 0.0 15.134176 36 TACCGTC 2740 0.0 15.016665 7 CGGCGTT 2730 0.0 14.825242 41 TGCGACG 840 0.0 14.666356 22 ATACCGT 2985 0.0 14.5949745 6 GCGTTAT 2875 0.0 14.3887825 43 GTCGTAG 2825 0.0 14.174769 11 TAGGTCG 685 0.0 14.130946 21 CGTTATT 2935 0.0 13.943721 44 ACCGTCG 2975 0.0 13.903883 8 GTCCTAT 2535 0.0 13.543487 1 CGAACAA 750 0.0 13.490972 41 GCGGCGT 2995 0.0 13.440316 40 >>END_MODULE