##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2558129_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11908639 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27912593538187 33.0 33.0 34.0 31.0 34.0 2 32.29198659897239 33.0 33.0 34.0 30.0 34.0 3 32.30732983005027 33.0 33.0 34.0 30.0 34.0 4 32.271210589220146 33.0 33.0 34.0 31.0 34.0 5 32.290762193731794 33.0 33.0 34.0 31.0 34.0 6 35.86321098489928 38.0 37.0 38.0 31.0 38.0 7 35.967536928443295 38.0 37.0 38.0 31.0 38.0 8 35.98254351315881 38.0 37.0 38.0 31.0 38.0 9 36.09782788780481 38.0 38.0 38.0 31.0 38.0 10 36.01035575937771 38.0 38.0 38.0 31.0 38.0 11 36.10907913154475 38.0 38.0 38.0 32.0 38.0 12 36.05261533244899 38.0 38.0 38.0 31.0 38.0 13 36.096123242966726 38.0 38.0 38.0 32.0 38.0 14 36.121153979056714 38.0 38.0 38.0 33.0 38.0 15 36.08675265074372 38.0 38.0 38.0 32.0 38.0 16 36.070865612770696 38.0 38.0 38.0 32.0 38.0 17 36.01109564241556 38.0 38.0 38.0 31.0 38.0 18 36.0220936246367 38.0 38.0 38.0 31.0 38.0 19 35.96185088825012 38.0 38.0 38.0 31.0 38.0 20 35.936263749367164 38.0 37.0 38.0 31.0 38.0 21 35.9511940029419 38.0 37.0 38.0 31.0 38.0 22 36.004939271397845 38.0 38.0 38.0 31.0 38.0 23 35.99673942589073 38.0 38.0 38.0 31.0 38.0 24 35.922789749525535 38.0 38.0 38.0 31.0 38.0 25 35.984141176838094 38.0 38.0 38.0 31.0 38.0 26 35.9226517824581 38.0 37.0 38.0 31.0 38.0 27 35.92443359816348 38.0 37.0 38.0 31.0 38.0 28 35.89484524637954 38.0 37.0 38.0 31.0 38.0 29 35.92497421409785 38.0 37.0 38.0 31.0 38.0 30 35.89121258944872 38.0 37.0 38.0 31.0 38.0 31 35.965881323634044 38.0 37.0 38.0 31.0 38.0 32 35.96396842661869 38.0 37.0 38.0 31.0 38.0 33 35.92831246291033 38.0 37.0 38.0 31.0 38.0 34 35.911835349110845 38.0 37.0 38.0 31.0 38.0 35 35.83689353586082 38.0 37.0 38.0 31.0 38.0 36 35.863719187389925 38.0 37.0 38.0 31.0 38.0 37 35.80355227830821 38.0 37.0 38.0 29.0 38.0 38 35.7865956806651 38.0 37.0 38.0 29.0 38.0 39 35.76982894518844 38.0 37.0 38.0 29.0 38.0 40 35.74311917591926 38.0 37.0 38.0 29.0 38.0 41 35.722297149153654 38.0 37.0 38.0 29.0 38.0 42 35.67327022004782 38.0 37.0 38.0 29.0 38.0 43 35.72165274302127 38.0 37.0 38.0 29.0 38.0 44 35.653346532714615 38.0 37.0 38.0 29.0 38.0 45 35.67137756044163 38.0 37.0 38.0 29.0 38.0 46 35.599462793355315 38.0 37.0 38.0 29.0 38.0 47 35.48232237117944 38.0 37.0 38.0 28.0 38.0 48 35.47947737772553 38.0 37.0 38.0 28.0 38.0 49 35.343890263194645 38.0 37.0 38.0 27.0 38.0 50 35.056743847890594 38.0 36.0 38.0 26.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 7.0 4 231.0 5 721.0 6 1544.0 7 687.0 8 370.0 9 297.0 10 246.0 11 187.0 12 203.0 13 197.0 14 159.0 15 198.0 16 450.0 17 1716.0 18 8650.0 19 25436.0 20 44918.0 21 59433.0 22 69551.0 23 79271.0 24 91136.0 25 103339.0 26 117417.0 27 135020.0 28 156393.0 29 183753.0 30 215850.0 31 252387.0 32 303722.0 33 379524.0 34 512287.0 35 802570.0 36 1780469.0 37 6580300.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.34759227211338 18.14849118317535 13.628273580371195 23.87564296434008 2 14.584504576887417 21.52303046553011 38.42772461235914 25.46474034522333 3 18.293181541643726 27.816264899630106 29.41295959113921 24.47759396758696 4 12.541053250695269 17.76017998853574 36.01008505486167 33.68868170590732 5 13.322334916004412 37.854193042301176 33.621370452977814 15.202101588716596 6 30.675160378552775 35.43854641298657 18.7351097459136 15.15118346254706 7 26.391354723685197 32.428634196548465 22.91931928591049 18.260691793855845 8 28.206138129592144 31.56255702637151 20.899117051132933 19.332187792903408 9 28.020272207194445 14.73372101972005 19.708766397107677 37.537240375977824 10 17.20604668010422 28.274567358174906 30.70847616929434 23.810909792426536 11 32.610013467358854 24.01064819509749 21.79440269041349 21.58493564713016 12 23.8352121160692 26.42660480700643 29.165810383113723 20.572372693810646 13 29.72244988344753 21.079782910320294 25.08865346533988 24.10911374089229 14 24.32190558741916 20.95719234600299 26.204574061032677 28.516328005545173 15 26.46034339728259 25.473296564674374 25.330572168877257 22.735787869165776 16 23.15745823538396 26.605497419277985 26.970464724867764 23.266579620470296 17 23.393369905824436 26.432535515361288 27.094444397772044 23.079650181042233 18 24.297534520352958 24.006578129869 29.927449518675576 21.768437831102467 19 23.555151961932996 26.86318666310535 29.29512203913288 20.286539335828778 20 24.75170827896723 23.682169793645446 29.83668743850994 21.729434488877388 21 24.20525935061517 25.447468868945844 27.54349056422287 22.803781216216116 22 23.731419720135836 25.41564363499137 26.802892228790125 24.05004441608267 23 21.791842932261833 26.290851486865606 27.552166311761788 24.365139269110774 24 22.51743203058017 27.974525822389783 26.93761802040414 22.570424126625905 25 23.79890834595795 24.172883197991172 26.725830973078985 25.302377482971888 26 23.64680109227492 24.830656141979947 27.869374241924934 23.6531685238202 27 24.132208257248834 24.954634932177544 26.58563513447214 24.32752167610148 28 23.00294973801995 24.52763490286144 28.83225472537311 23.637160633745495 29 23.356730385212945 24.233086520646797 29.570166541017283 22.840016553122975 30 23.54544502224601 25.596531835318633 29.05985777977749 21.79816536265787 31 24.928144171862893 24.123849514955833 27.196707414022725 23.75129889915855 32 21.521216583497733 25.408188594466708 28.968947417716933 24.101647404318623 33 22.98310139699419 25.669029039307766 28.137818772462253 23.21005079123579 34 21.69924409567351 25.227088834215156 28.64337585743193 24.430291212679407 35 22.598124987188633 26.415668612202204 28.932736712890637 22.053469687718525 36 23.974005050429103 25.349469481481268 27.629975377918992 23.04655009017063 37 24.06324550812389 25.855829360580156 27.89481337405505 22.186111757240905 38 24.370817206499893 25.13031198339279 27.26736718082942 23.231503629277896 39 24.244009795233644 24.14009422216308 27.58766495515559 24.028231027447692 40 23.744207806731488 25.822021415174433 27.223379769449746 23.210391008644333 41 21.89604083542962 26.23738017185809 27.53113387307086 24.335445119641427 42 25.193727235647877 26.32179316411 27.222197719017693 21.262281881224425 43 24.856681757808595 23.775991894637002 26.688562684246207 24.678763663308196 44 23.403469760045297 25.569963301341893 28.00858220192789 23.017984736684923 45 25.930494660221036 24.12589717431186 27.149080596027808 22.794527569439296 46 22.416440703257525 25.102465529436234 29.831444214573978 22.649649552732264 47 24.70438477478409 24.904894673522307 28.087332229988665 22.30338832170494 48 24.53675856661706 26.13306188893626 27.171635650387927 22.15854389405876 49 23.263352946345268 25.569938580319455 29.452523613487298 21.714184859847975 50 23.74988956844187 26.27251586099497 26.191367560901956 23.786227009661207 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1524.0 1 1782.5 2 2041.0 3 6401.5 4 10762.0 5 12457.0 6 14152.0 7 12556.0 8 10960.0 9 14413.5 10 17867.0 11 25047.5 12 32228.0 13 59070.0 14 85912.0 15 106857.0 16 127802.0 17 118497.5 18 109193.0 19 92885.5 20 76578.0 21 80316.0 22 84054.0 23 92090.5 24 100127.0 25 114689.5 26 129252.0 27 143580.0 28 157908.0 29 179920.0 30 201932.0 31 236164.5 32 270397.0 33 294923.0 34 319449.0 35 351987.5 36 384526.0 37 416501.0 38 448476.0 39 475746.0 40 503016.0 41 528502.0 42 553988.0 43 569201.5 44 584415.0 45 684646.0 46 784877.0 47 993264.5 48 1201652.0 49 1228833.0 50 1256014.0 51 1067738.0 52 879462.0 53 747330.0 54 615198.0 55 622136.5 56 629075.0 57 594808.5 58 560542.0 59 535582.0 60 510622.0 61 437113.5 62 363605.0 63 317067.5 64 270530.0 65 228642.5 66 186755.0 67 161974.0 68 137193.0 69 116505.5 70 95818.0 71 78383.0 72 60948.0 73 55404.0 74 49860.0 75 38276.5 76 26693.0 77 22149.5 78 17606.0 79 14554.5 80 11503.0 81 10205.5 82 8908.0 83 8049.0 84 7190.0 85 5663.0 86 4136.0 87 3890.0 88 3644.0 89 1895.5 90 147.0 91 115.0 92 83.0 93 49.0 94 15.0 95 7.5 96 0.0 97 0.0 98 0.0 99 2.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.033698225296778246 2 0.0 3 3.190960780656799E-4 4 0.0027291111939827884 5 0.03780448798557081 6 0.03745180284665611 7 0.06437343511714479 8 0.052491304841804344 9 0.05235694859840826 10 0.060174802511017415 11 0.0548173473055989 12 0.053986018049585686 13 0.04187716161351436 14 0.04156646280066093 15 0.06197181726643994 16 0.04518568410714272 17 0.044832998968228024 18 0.051794331829187204 19 0.05607693708743712 20 0.05297834622411512 21 0.04072673627943545 22 0.044446724768464306 23 0.061535159475402695 24 0.04179318896139181 25 0.050106481521524 26 0.0361922130648179 27 0.0437245599602104 28 0.04089468158368055 29 0.043203929517050606 30 0.039517530088870774 31 0.04442153297282754 32 0.03488223969170617 33 0.03546165099135174 34 0.03767852900738699 35 0.043220724047475116 36 0.04279246352165012 37 0.03716629582943945 38 0.04919117961338823 39 0.047923192566337765 40 0.042968806091107474 41 0.04573150634593928 42 0.04563073916339222 43 0.045420807533085854 44 0.041432106557264856 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0389381187892252 50 0.0068101820871385894 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1.1908639E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.12428128712538 #Duplication Level Percentage of deduplicated Percentage of total 1 65.96000485309386 18.550777301885667 2 16.16034914529746 9.08996410121004 3 6.911468480146345 5.831402509282102 4 3.3674257451303653 3.7882571547821673 5 1.9736533588435 2.7753791113697197 6 1.206042151463761 2.0351441227138016 7 0.8215155173570953 1.6173173444322497 8 0.5664535352656425 1.2744878849518022 9 0.41284755163522235 1.0449936603801013 >10 2.1865949185607394 11.27043819193297 >50 0.20511163630433232 4.031541502533206 >100 0.18117305122635957 10.633658413305985 >500 0.02673337429114211 5.182820318330331 >1k 0.01812007173484418 9.560332599570966 >5k 0.0013590052315050822 2.5274473160493924 >10k+ 0.0011476044177154028 10.786038467269552 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 143827 1.2077534636829617 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 107294 0.9009761736836593 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 87132 0.7316705124741795 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 72448 0.6083650700974309 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 71976 0.6044015609172467 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 65553 0.5504659264589346 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG 54276 0.4557699666603379 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 52689 0.44244350676848965 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 45067 0.3784395513206841 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 38508 0.3233618887935053 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37492 0.31483026733785446 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 35848 0.30102516332890766 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 34391 0.2887903479146526 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC 33555 0.2817702341972076 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC 29179 0.2450238016283809 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 28402 0.23849912655845895 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT 23335 0.19595018372796422 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 22054 0.1851932869910659 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 21581 0.18122138054566939 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 20784 0.17452876017150237 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGT 18762 0.15754948991232332 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 17895 0.15026906097329848 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 17118 0.14374438590337654 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG 16431 0.13797546470255753 No Hit GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTAC 15978 0.13417150356140614 No Hit GTACATGGGACTGCTGCTAGCTGGAGCTCCTCGCCCTTGCTCACTTTTTC 14636 0.12290237364656027 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC 14522 0.12194508541236325 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 13255 0.1113057503884365 No Hit GGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 12694 0.10659488460436159 No Hit ATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGG 12607 0.10586432253089542 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA 12348 0.10368943084092146 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12099 0.10159851180307003 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.5191795636764202E-5 0.0 0.0 0.0 0.0 2 3.358906084901893E-5 8.397265212254733E-6 0.0 0.0 0.0 3 3.358906084901893E-5 8.397265212254733E-6 0.0 1.6794530424509466E-5 0.0 4 3.358906084901893E-5 8.397265212254733E-6 0.0 2.5191795636764202E-5 0.0 5 4.198632606127367E-5 8.397265212254733E-6 0.0 2.5191795636764202E-5 0.0 6 4.198632606127367E-5 8.397265212254733E-6 0.0 2.5191795636764202E-5 0.0 7 4.198632606127367E-5 8.397265212254733E-6 0.0 2.5191795636764202E-5 0.0 8 7.55753869102926E-5 8.397265212254733E-6 0.0 2.5191795636764202E-5 0.0 9 9.236991733480207E-5 8.397265212254733E-6 0.0 6.717812169803786E-5 0.0 10 1.4275350860833047E-4 8.397265212254733E-6 0.0 1.3435624339607573E-4 0.0 11 2.6871248679215145E-4 8.397265212254733E-6 0.0 1.511507738205852E-4 0.0 12 2.939042824289157E-4 8.397265212254733E-6 0.0 1.763425694573494E-4 0.0 13 2.939042824289157E-4 1.6794530424509466E-5 0.0 1.8473983466960414E-4 0.0 14 3.106988128534251E-4 1.6794530424509466E-5 0.0 2.267261607308778E-4 0.0 15 3.106988128534251E-4 1.6794530424509466E-5 0.0 2.6031522157989674E-4 0.0 16 4.1986326061273666E-4 1.6794530424509466E-5 0.0 3.106988128534251E-4 8.397265212254733E-6 17 4.450550562495009E-4 1.6794530424509466E-5 0.0 3.6108240412695356E-4 8.397265212254733E-6 18 4.534523214617556E-4 1.6794530424509466E-5 0.0 4.1146599540048195E-4 8.397265212254733E-6 19 4.6184958667401033E-4 1.6794530424509466E-5 0.0 5.206304431597935E-4 8.397265212254733E-6 20 4.6184958667401033E-4 1.6794530424509466E-5 0.0 6.549866865558692E-4 8.397265212254733E-6 21 4.954386475230293E-4 1.6794530424509466E-5 0.0 8.565210516499829E-4 8.397265212254733E-6 22 5.038359127352841E-4 1.6794530424509466E-5 0.0 0.0011588225992911533 8.397265212254733E-6 23 5.542195040088124E-4 1.6794530424509466E-5 0.0 0.0015870831251161446 8.397265212254733E-6 24 5.794112996455766E-4 2.5191795636764202E-5 0.0 0.002116110833488193 8.397265212254733E-6 25 5.794112996455766E-4 5.0383591273528404E-5 0.0 0.002334439729006816 8.397265212254733E-6 26 7.473566038906713E-4 5.0383591273528404E-5 0.0 0.002779494785256317 8.397265212254733E-6 27 7.725483995274355E-4 5.0383591273528404E-5 0.0 0.0032413443719303274 8.397265212254733E-6 28 7.809456647396903E-4 5.878085648578314E-5 0.0 0.00535745520541852 8.397265212254733E-6 29 8.229319908009639E-4 5.878085648578314E-5 0.0 0.00832168982534444 8.397265212254733E-6 30 8.481237864377281E-4 6.717812169803786E-5 0.0 0.012990569283358074 8.397265212254733E-6 31 8.649183168622376E-4 7.55753869102926E-5 0.0 0.018658723301630018 8.397265212254733E-6 32 8.81712847286747E-4 7.55753869102926E-5 0.0 0.02471315151966568 8.397265212254733E-6 33 8.985073777112565E-4 7.55753869102926E-5 0.0 0.03154012813722878 8.397265212254733E-6 34 9.236991733480207E-4 7.55753869102926E-5 0.0 0.03928240666292764 8.397265212254733E-6 35 9.572882341970396E-4 7.55753869102926E-5 0.0 0.04995533074770341 8.397265212254733E-6 36 9.656854994092944E-4 7.55753869102926E-5 0.0 0.0628871191745757 8.397265212254733E-6 37 0.0010328636211073322 7.55753869102926E-5 0.0 0.08035343081606555 8.397265212254733E-6 38 0.0010580554167440965 9.236991733480207E-5 0.0 0.1008427579339671 8.397265212254733E-6 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGACG 1095 0.0 17.478899 22 AATGCGA 1140 0.0 17.175398 20 AGTCGAC 1265 0.0 16.520174 35 GTACTAG 1485 0.0 16.451803 1 CGACGAA 1265 0.0 16.346071 38 TCGACGA 1285 0.0 16.262846 37 CAATGCG 1240 0.0 16.146278 19 CGACGAG 1390 0.0 16.14161 24 GTCGACG 1295 0.0 15.967397 36 GTATTAG 2255 0.0 15.9095545 1 GCGTCGG 1715 0.0 15.39588 9 CAATTCG 1365 0.0 15.151294 15 TTAACGG 885 0.0 14.913841 35 GACCGTC 1730 0.0 14.87814 22 AGACCGT 1720 0.0 14.83674 21 GTATTAA 2170 0.0 14.808467 1 GGCGTCG 1790 0.0 14.626954 8 GTCGGCT 1760 0.0 14.623122 26 CGAACAA 1435 0.0 14.561673 41 CGTCGTA 2300 0.0 14.349904 10 >>END_MODULE