##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2558128_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9135358 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.04325205427089 33.0 32.0 34.0 28.0 34.0 2 32.09085697572005 33.0 33.0 34.0 28.0 34.0 3 32.08450779925647 33.0 33.0 34.0 28.0 34.0 4 32.04632297935122 33.0 33.0 34.0 28.0 34.0 5 32.0682302762519 33.0 33.0 34.0 30.0 34.0 6 35.59440735655899 38.0 36.0 38.0 29.0 38.0 7 35.701665003166816 38.0 37.0 38.0 30.0 38.0 8 35.68558780071892 38.0 37.0 38.0 29.0 38.0 9 35.84006352022548 38.0 37.0 38.0 30.0 38.0 10 35.779457137859296 38.0 37.0 38.0 29.0 38.0 11 35.85144271302778 38.0 37.0 38.0 31.0 38.0 12 35.79269832665562 38.0 37.0 38.0 29.0 38.0 13 35.83777526835839 38.0 37.0 38.0 31.0 38.0 14 35.846710988228374 38.0 37.0 38.0 31.0 38.0 15 35.807390909037174 38.0 37.0 38.0 29.0 38.0 16 35.80498224590651 38.0 37.0 38.0 29.0 38.0 17 35.76189044808096 38.0 37.0 38.0 29.0 38.0 18 35.77582597200898 38.0 37.0 38.0 29.0 38.0 19 35.693997761226214 38.0 37.0 38.0 29.0 38.0 20 35.693060852130806 38.0 37.0 38.0 29.0 38.0 21 35.71352047724895 38.0 37.0 38.0 29.0 38.0 22 35.73770672150999 38.0 37.0 38.0 29.0 38.0 23 35.73090928675154 38.0 37.0 38.0 29.0 38.0 24 35.631002966714604 38.0 37.0 38.0 29.0 38.0 25 35.69697334247875 38.0 37.0 38.0 29.0 38.0 26 35.65310226484829 38.0 37.0 38.0 29.0 38.0 27 35.657070144377485 38.0 37.0 38.0 29.0 38.0 28 35.64047604921449 38.0 37.0 38.0 29.0 38.0 29 35.685114365523496 38.0 37.0 38.0 29.0 38.0 30 35.661836241119396 38.0 37.0 38.0 29.0 38.0 31 35.71665182689064 38.0 37.0 38.0 29.0 38.0 32 35.73359018880267 38.0 37.0 38.0 29.0 38.0 33 35.68833668040158 38.0 37.0 38.0 29.0 38.0 34 35.69986113297366 38.0 37.0 38.0 29.0 38.0 35 35.62514692910776 38.0 37.0 38.0 29.0 38.0 36 35.63757851635371 38.0 37.0 38.0 29.0 38.0 37 35.58936748838962 38.0 37.0 38.0 29.0 38.0 38 35.56846628232851 38.0 37.0 38.0 29.0 38.0 39 35.56313359585908 38.0 37.0 38.0 29.0 38.0 40 35.54689372874057 38.0 37.0 38.0 29.0 38.0 41 35.53854627262555 38.0 37.0 38.0 29.0 38.0 42 35.50229427243026 38.0 37.0 38.0 28.0 38.0 43 35.54827944345476 38.0 37.0 38.0 29.0 38.0 44 35.50030956641218 38.0 37.0 38.0 28.0 38.0 45 35.535333590648555 38.0 37.0 38.0 29.0 38.0 46 35.51289615579378 38.0 37.0 38.0 28.0 38.0 47 35.418571007288385 38.0 37.0 38.0 28.0 38.0 48 35.43422885014468 38.0 37.0 38.0 28.0 38.0 49 35.330224825343464 38.0 37.0 38.0 27.0 38.0 50 35.013427388395726 38.0 36.0 38.0 27.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 9.0 4 180.0 5 503.0 6 1051.0 7 482.0 8 272.0 9 215.0 10 176.0 11 154.0 12 139.0 13 148.0 14 125.0 15 132.0 16 313.0 17 1401.0 18 7941.0 19 24426.0 20 42268.0 21 54681.0 22 62805.0 23 70542.0 24 80044.0 25 91667.0 26 103197.0 27 117599.0 28 135470.0 29 157098.0 30 182890.0 31 212398.0 32 254869.0 33 316370.0 34 417942.0 35 630587.0 36 1331760.0 37 4835504.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.44155578229192 18.123422253261598 13.212306046787262 25.222715917659222 2 15.794969392551447 20.882476636383597 37.46377536600099 25.85877860506397 3 18.25647639581195 25.868091435797382 29.348360562423153 26.52707160596751 4 13.156377754818902 16.98664962484568 35.78068682654539 34.07628579379002 5 14.770343984420043 36.44693062877748 33.24849475676572 15.534230630036754 6 32.567538371965824 35.19105307310255 17.721519541782296 14.519889013149328 7 28.188129335495322 30.79812325873715 22.427750324539193 18.585997081228335 8 27.773446308564232 31.66117813115119 20.71703940848449 19.84833615180009 9 27.775201671857452 14.16359706062542 19.60439482453141 38.456806442985716 10 17.38117800342946 27.089976053350295 30.057853546040565 25.470992397179675 11 34.481912293559816 22.836591852657595 22.149648023838616 20.531847829943974 12 24.53568126931182 24.866081544513957 28.707335208098616 21.890901978075608 13 29.64161940354732 20.132479092968612 25.10452420625117 25.121377297232893 14 24.69982809775016 20.20485474380345 25.193294213471102 29.902022944975293 15 25.912350597609564 26.259607617639407 23.449930860749443 24.37811092400159 16 24.80139998214979 25.56292500338114 25.2357733548923 24.399901659576777 17 23.66761535648802 26.201316951870446 26.127736819010067 24.003330872631466 18 25.167260579991463 23.939350530645072 27.962858677979384 22.930530211384077 19 24.942047045335716 25.603268189605117 26.887936739008104 22.566748026051066 20 25.57997899657328 23.66505086962488 27.102711005968636 23.652259127833197 21 26.00011432506163 24.520557485794782 26.118053109904494 23.361275079239093 22 25.169088918398185 24.23553805439712 25.66788507494755 24.927487952257145 23 23.229630609703843 24.766694063310783 26.334874467583607 25.668800859401763 24 23.74899869412741 26.22768176131277 26.05318214048123 23.970137404078592 25 25.08282638721878 23.733948896677614 25.499750962310546 25.683473753793063 26 24.780314997359948 24.716114963940452 26.25230580283768 24.25126423586192 27 25.20994875724857 24.23857813821471 25.60971296152616 24.941760143010566 28 23.988726585308882 24.213202755562982 26.88136906920084 24.916701589927296 29 24.18991836599708 23.880491919716455 27.42537178590616 24.504217928380307 30 24.364893241442626 24.63803141652964 27.565470814305026 23.431604527722712 31 25.782229429435745 23.797865695269785 25.833162497842654 24.586742377451817 32 23.790800405499247 24.321096451049367 26.637003930819848 25.251099212631534 33 24.033485173667383 24.62396522272349 26.331884280145417 25.01066532346371 34 23.823695018439153 24.206133068950102 26.530272339693028 25.439899572917714 35 24.563609237423297 24.69002567313686 27.180683516058963 23.565681573380886 36 24.704096345802725 24.42836675856923 26.34833345068915 24.519203444938896 37 25.303916902989904 24.83172303566278 26.540291314335345 23.32406874701197 38 24.932632325488537 24.08357950305512 26.49259672898537 24.491191442470974 39 25.493024518523622 23.570382488179995 26.05401550549914 24.882577487797246 40 25.198050323212257 24.976680314988222 25.601389434906924 24.223879926892597 41 23.991247835093095 25.055579861040766 26.261915543579857 24.691256760286283 42 26.23423690195283 25.112596099691036 25.792591452059582 22.860575546296552 43 25.503998952200384 23.60723853440781 25.484933116808524 25.403829396583284 44 24.661816402635427 24.818169852102645 25.857222734347847 24.662791010914077 45 25.802896832286155 24.001117416525986 25.539940525592975 24.65604522559488 46 23.82068661129646 24.564598344148088 27.367093878532184 24.24762116602327 47 25.24717695792546 24.275939705920667 26.475284274573585 24.00159906158029 48 25.67023645926082 25.168581242245786 25.409600806011106 23.751581492482288 49 24.200794037361103 25.184208082641558 26.992528742680733 23.6224691373166 50 25.047190409511934 25.410033562854846 25.109753348759323 24.433022678873904 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 882.0 1 1051.0 2 1220.0 3 3317.5 4 5415.0 5 6092.5 6 6770.0 7 5988.5 8 5207.0 9 6733.0 10 8259.0 11 11353.0 12 14447.0 13 27116.5 14 39786.0 15 49317.0 16 58848.0 17 54979.5 18 51111.0 19 44331.0 20 37551.0 21 41832.5 22 46114.0 23 51221.0 24 56328.0 25 66204.0 26 76080.0 27 86566.0 28 97052.0 29 114092.5 30 131133.0 31 147270.0 32 163407.0 33 179777.5 34 196148.0 35 222962.0 36 249776.0 37 283564.5 38 317353.0 39 353106.5 40 388860.0 41 412860.0 42 436860.0 43 446544.5 44 456229.0 45 516196.5 46 576164.0 47 697214.0 48 818264.0 49 841314.0 50 864364.0 51 751435.0 52 638506.0 53 572738.0 54 506970.0 55 532279.0 56 557588.0 57 541673.5 58 525759.0 59 495781.5 60 465804.0 61 414483.5 62 363163.0 63 322236.5 64 281310.0 65 241602.5 66 201895.0 67 180763.0 68 159631.0 69 137334.0 70 115037.0 71 93146.5 72 71256.0 73 62911.5 74 54567.0 75 41757.0 76 28947.0 77 23693.5 78 18440.0 79 15356.0 80 12272.0 81 11270.5 82 10269.0 83 9668.0 84 9067.0 85 7393.5 86 5720.0 87 5463.5 88 5207.0 89 2700.0 90 193.0 91 152.5 92 112.0 93 61.5 94 11.0 95 7.0 96 3.0 97 3.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03143828627186805 2 0.0 3 3.283943552075354E-4 4 0.0020141520452728835 5 0.034076387592035254 6 0.03398881576397991 7 0.06009616700297898 8 0.04933577863067873 9 0.04855857865668757 10 0.05541107420201813 11 0.050638409573001954 12 0.05051799830942586 13 0.038334567731226295 14 0.03748074240768671 15 0.057282922026701086 16 0.04173892254687775 17 0.04178270846090542 18 0.04812071951641085 19 0.051185733498347846 20 0.048897919490402016 21 0.038334567731226295 22 0.04129011692809412 23 0.05786308538756773 24 0.03867390856494075 25 0.04608467451412413 26 0.032445362294504496 27 0.040775632438268976 28 0.03755736775723513 29 0.03967003810907027 30 0.036670702998174785 31 0.04122443805705261 32 0.031876145412144764 33 0.032379683423462986 34 0.034590872081860395 35 0.03977950289413945 36 0.03924312544730048 37 0.033846511543389975 38 0.0451432773625292 39 0.04397200416228899 40 0.03927596488282123 41 0.042724105612500354 42 0.04187028028896076 43 0.04204542394507145 44 0.038137531118101774 45 0.0 46 0.0 47 0.0 48 0.0 49 0.036057700201787383 50 0.00609718852835324 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 9135358.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.440257091956575 #Duplication Level Percentage of deduplicated Percentage of total 1 74.49293642616004 24.910629456255688 2 13.326140328156772 8.912591172341061 3 4.648098204388935 4.663007968302832 4 2.19433826055448 2.935169423186344 5 1.1812092018201765 1.9749969694125766 6 0.764882137036395 1.5346713184525322 7 0.5003325444202125 1.171187424181928 8 0.3955682173391378 1.058232230818218 9 0.29287910769955916 0.8814557392502486 >10 1.8079809381540837 11.55307617418016 >50 0.19518671309927513 4.571339145773274 >100 0.15959268783643596 10.843270592568164 >500 0.02153790687875348 4.979753187808548 >1k 0.01716359366331239 11.808093343193693 >5k 0.0014579114289072815 3.305570739729874 >10k+ 6.958213637966571E-4 4.896955114544974 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 56994 0.6238835960232757 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 44526 0.487402901999024 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 35957 0.39360252767324494 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 32600 0.3568551993255218 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 30490 0.3337581296759251 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 25779 0.28218926942983513 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG 21696 0.2374947976860896 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 20739 0.2270190177549692 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19994 0.21886389126731542 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16975 0.18581647265493043 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 15679 0.1716298365099649 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 14310 0.15664410743399437 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC 13778 0.15082058086831407 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 13746 0.1504702935560927 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 12283 0.1344555955004719 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 12121 0.13268226598235122 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 11778 0.1289276238544784 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC 11582 0.1267821140671225 No Hit CTCTACCACCATGAATCTACTTCTGATCCTTACCTTTGTTGCAGCTGCTG 10649 0.11656904962016813 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 10183 0.11146799063594443 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCG 10096 0.11051564700584257 No Hit TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT 9677 0.10592907251144398 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 9334 0.10217443038357119 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 9323 0.10205401911999508 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT 9310 0.10191171489940515 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 9139 0.10003986707472219 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.473239253458923E-5 0.0 0.0 0.0 0.0 2 5.473239253458923E-5 0.0 0.0 0.0 0.0 3 5.473239253458923E-5 0.0 0.0 1.0946478506917846E-5 0.0 4 5.473239253458923E-5 0.0 0.0 1.0946478506917846E-5 0.0 5 5.473239253458923E-5 0.0 0.0 1.0946478506917846E-5 0.0 6 8.757182805534277E-5 0.0 0.0 1.0946478506917846E-5 1.0946478506917846E-5 7 8.757182805534277E-5 0.0 0.0 1.0946478506917846E-5 1.0946478506917846E-5 8 8.757182805534277E-5 0.0 0.0 1.0946478506917846E-5 1.0946478506917846E-5 9 8.757182805534277E-5 0.0 0.0 4.378591402767138E-5 1.0946478506917846E-5 10 9.851830656226061E-5 0.0 0.0 6.567887104150707E-5 2.189295701383569E-5 11 1.641971776037677E-4 0.0 0.0 7.662534954842492E-5 2.189295701383569E-5 12 1.641971776037677E-4 0.0 0.0 7.662534954842492E-5 2.189295701383569E-5 13 1.641971776037677E-4 1.0946478506917846E-5 0.0 7.662534954842492E-5 2.189295701383569E-5 14 1.641971776037677E-4 1.0946478506917846E-5 0.0 9.851830656226061E-5 2.189295701383569E-5 15 1.641971776037677E-4 1.0946478506917846E-5 0.0 1.5325069909684984E-4 2.189295701383569E-5 16 2.0798309163143908E-4 1.0946478506917846E-5 0.0 1.641971776037677E-4 2.189295701383569E-5 17 2.189295701383569E-4 1.0946478506917846E-5 0.0 1.9703661312452122E-4 2.189295701383569E-5 18 2.189295701383569E-4 1.0946478506917846E-5 0.0 2.0798309163143908E-4 2.189295701383569E-5 19 2.189295701383569E-4 1.0946478506917846E-5 0.0 2.7366196267294615E-4 2.189295701383569E-5 20 2.189295701383569E-4 1.0946478506917846E-5 0.0 2.955549196867818E-4 2.189295701383569E-5 21 2.5176900565911044E-4 1.0946478506917846E-5 0.0 3.831267477421246E-4 6.567887104150707E-5 22 2.5176900565911044E-4 1.0946478506917846E-5 0.0 4.925915328113031E-4 6.567887104150707E-5 23 2.7366196267294615E-4 1.0946478506917846E-5 0.0 6.348957534012351E-4 6.567887104150707E-5 24 2.84608441179864E-4 1.0946478506917846E-5 0.0 8.319323665257563E-4 6.567887104150707E-5 25 2.84608441179864E-4 1.0946478506917846E-5 0.0 8.757182805534277E-4 6.567887104150707E-5 26 3.393408337144532E-4 1.0946478506917846E-5 0.0 0.0011055943291987025 6.567887104150707E-5 27 3.612337907282889E-4 2.189295701383569E-5 0.0 0.0013902027703785664 7.662534954842492E-5 28 3.612337907282889E-4 3.283943552075354E-5 0.0 0.002298760486452748 7.662534954842492E-5 29 3.831267477421246E-4 3.283943552075354E-5 0.0 0.003426247772665286 7.662534954842492E-5 30 3.9407322624904244E-4 3.283943552075354E-5 0.0 0.0053637744683897445 7.662534954842492E-5 31 4.1596618326287816E-4 3.283943552075354E-5 0.0 0.008461627885847495 7.662534954842492E-5 32 4.26912661769796E-4 3.283943552075354E-5 0.0 0.011471909475249903 7.662534954842492E-5 33 4.488056187836317E-4 3.283943552075354E-5 0.0 0.014952889640449777 9.851830656226061E-5 34 4.488056187836317E-4 3.283943552075354E-5 0.0 0.019232962736654657 9.851830656226061E-5 35 4.816450543043852E-4 3.283943552075354E-5 0.0 0.024968917474279605 9.851830656226061E-5 36 5.035380113182209E-4 3.283943552075354E-5 0.0 0.03116462430919511 9.851830656226061E-5 37 5.254309683320566E-4 3.283943552075354E-5 0.0 0.04006411133531931 9.851830656226061E-5 38 5.254309683320566E-4 4.378591402767138E-5 0.0 0.051251412369389356 9.851830656226061E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCGTA 3155 0.0 19.039448 10 CCGTCGT 3190 0.0 18.623623 9 TACCGTC 3330 0.0 18.237507 7 ATACCGT 3465 0.0 17.971478 6 ACCGTCG 3450 0.0 17.410578 8 GGCGTTA 3105 0.0 17.355558 42 GTCGTAG 3475 0.0 17.348448 11 TCTAGAC 1765 0.0 17.327654 3 CTAGACA 2025 0.0 15.974024 4 CGGCGTT 3460 0.0 15.8294 41 GTTCTAG 1975 0.0 15.825155 1 GCGGCGT 3505 0.0 15.438241 40 GGTATAG 2990 0.0 15.385152 1 GTACTAG 690 0.0 14.673558 1 CCTTACC 4675 0.0 14.491875 28 GTAGACC 3300 0.0 14.4699745 4 ATGCGGC 3755 0.0 14.469688 35 GAATCTA 3640 0.0 14.445588 13 GCGTTAT 3835 0.0 14.228943 43 TCTACCA 5065 0.0 14.204893 2 >>END_MODULE