##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2558111_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10196119 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.351533657070892 33.0 32.0 34.0 25.0 34.0 2 31.483971303198796 33.0 32.0 34.0 25.0 34.0 3 31.50356346370614 33.0 32.0 34.0 25.0 34.0 4 31.42988376263557 33.0 32.0 34.0 27.0 34.0 5 31.47292160870229 33.0 32.0 34.0 27.0 34.0 6 34.76415065379288 38.0 35.0 38.0 26.0 38.0 7 34.88225873001286 38.0 36.0 38.0 26.0 38.0 8 34.874597677802704 38.0 36.0 38.0 26.0 38.0 9 35.0487723809422 38.0 36.0 38.0 28.0 38.0 10 34.96947956374381 38.0 36.0 38.0 27.0 38.0 11 35.02592986605982 38.0 36.0 38.0 27.0 38.0 12 34.967367093302855 38.0 36.0 38.0 27.0 38.0 13 35.01911040857801 38.0 36.0 38.0 27.0 38.0 14 35.03220029111076 38.0 36.0 38.0 27.0 38.0 15 34.98371694171086 38.0 36.0 38.0 27.0 38.0 16 34.98534716983982 38.0 36.0 38.0 27.0 38.0 17 34.934080898820426 38.0 36.0 38.0 26.0 38.0 18 34.958478613284136 38.0 36.0 38.0 27.0 38.0 19 34.87229709657174 38.0 36.0 38.0 26.0 38.0 20 34.87691963971782 38.0 36.0 38.0 26.0 38.0 21 34.888800140524054 38.0 36.0 38.0 26.0 38.0 22 34.90165346245959 38.0 36.0 38.0 26.0 38.0 23 34.8899310610243 38.0 36.0 38.0 26.0 38.0 24 34.77493652241603 38.0 36.0 38.0 25.0 38.0 25 34.850200747951256 38.0 36.0 38.0 26.0 38.0 26 34.80783619728251 38.0 36.0 38.0 25.0 38.0 27 34.81035539110518 38.0 36.0 38.0 25.0 38.0 28 34.7904358511312 38.0 36.0 38.0 25.0 38.0 29 34.83026100421151 38.0 36.0 38.0 25.0 38.0 30 34.788260513632686 38.0 36.0 38.0 25.0 38.0 31 34.84114740128082 38.0 36.0 38.0 25.0 38.0 32 34.84688919381973 38.0 36.0 38.0 25.0 38.0 33 34.79095398945422 38.0 36.0 38.0 25.0 38.0 34 34.792349716593144 38.0 36.0 38.0 25.0 38.0 35 34.697722535407834 38.0 36.0 38.0 25.0 38.0 36 34.706848360636045 38.0 36.0 38.0 25.0 38.0 37 34.646228530679174 38.0 35.0 38.0 25.0 38.0 38 34.6177893765265 38.0 35.0 38.0 25.0 38.0 39 34.61289869213962 38.0 35.0 38.0 25.0 38.0 40 34.562581801958174 38.0 35.0 38.0 25.0 38.0 41 34.541436109170554 38.0 35.0 38.0 25.0 38.0 42 34.47715282648231 38.0 35.0 38.0 24.0 38.0 43 34.5126386814434 38.0 35.0 38.0 24.0 38.0 44 34.4436690077862 38.0 35.0 38.0 24.0 38.0 45 34.447172203462905 38.0 35.0 38.0 24.0 38.0 46 34.394719010243016 38.0 35.0 38.0 24.0 38.0 47 34.256301049448325 38.0 35.0 38.0 16.0 38.0 48 34.24063871753557 38.0 35.0 38.0 16.0 38.0 49 34.11300603690483 38.0 34.0 38.0 16.0 38.0 50 33.72766147590078 38.0 34.0 38.0 16.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 22.0 4 326.0 5 701.0 6 969.0 7 430.0 8 259.0 9 215.0 10 178.0 11 138.0 12 149.0 13 168.0 14 131.0 15 156.0 16 399.0 17 2858.0 18 18001.0 19 53359.0 20 89632.0 21 109348.0 22 117739.0 23 125570.0 24 135467.0 25 147902.0 26 162207.0 27 178816.0 28 202427.0 29 230687.0 30 264411.0 31 303952.0 32 358701.0 33 439772.0 34 577184.0 35 850835.0 36 1665196.0 37 4157814.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.806006990732 18.628579983525825 13.83787419586372 23.72753882987845 2 15.077795777001032 21.80584593020148 37.343081225317206 25.773277067480283 3 18.43020474311045 27.648009129770674 29.74202670159769 24.179759425521187 4 12.681669178614971 17.984879663340408 35.52467026816662 33.808780889878 5 13.687171610423073 37.57654820147781 33.557073514920745 15.179206673178374 6 30.931077355776686 35.219007051090806 18.498883192217008 15.351032400915502 7 26.117153927294062 32.516108152262284 22.79962870707809 18.567109213365566 8 28.759277300965415 30.764329204004902 20.825289383497296 19.65110411153239 9 27.807884465675137 14.105109201421492 19.99421284371911 38.09279348918426 10 17.79578972902067 28.006509344426117 30.199193632586287 23.998507293966924 11 32.95944366834911 23.51862578106824 21.559028943324478 21.96290160725817 12 23.785601822423956 26.759414094152422 28.772167764895062 20.68281631852856 13 30.069913946782595 20.555612787011665 25.220283874563037 24.154189391642703 14 24.22396714137132 20.998236646840677 26.28543127685979 28.492364934928215 15 26.63361376779987 25.64762993052022 24.81070305527521 22.908053246404698 16 23.227806787551096 26.046169413173402 27.293245719577175 23.432778079698323 17 22.968738272252978 26.63037084822425 27.26941992263673 23.131470956886044 18 24.388521531866193 23.487865312985665 30.048484193160053 22.075128961988092 19 23.572483112553474 26.432266037162293 29.399680001507168 20.595570848777065 20 24.74084620226492 23.25203220123367 29.728789627862735 22.27833196863868 21 24.750191488708325 24.983617867517776 27.619544435927295 22.646646207846608 22 24.287490018075637 24.829121326727872 27.069173570739036 23.814215084457455 23 22.011254056051648 25.546852468594455 27.89861909515568 24.543274380198216 24 22.51885827534529 27.521431251977564 27.29014297312478 22.669567499552365 25 23.71319395412017 24.067287121205283 26.939760989074607 25.279757935599946 26 23.51013443811582 24.797633517142177 28.026687289935847 23.66554475480616 27 24.1677132951298 24.51146464112785 26.99426260204934 24.326559461693005 28 22.995484621487897 24.21154533121949 29.177863215318794 23.61510683197382 29 23.22027600812803 23.679540629417207 29.941365025502876 23.158818336951885 30 23.468372917284146 25.09099457147564 29.43227373553135 22.008358775708867 31 25.10186196849677 23.841293126995637 27.16613174906674 23.890713155440853 32 21.671596334246278 25.09825570312783 28.827974598763255 24.40217336386264 33 23.04203281860725 25.33862503886223 28.116603661373883 23.502738481156637 34 21.70708697323428 25.057986930792612 28.90585465407296 24.329071441900147 35 22.741504420958446 26.078503898998857 29.237271838906786 21.94271984113591 36 23.584983502802153 25.261605851533364 27.668620062307593 23.484790583356887 37 23.76284482142067 25.849449828954818 28.090877973056006 22.296827376568505 38 24.089747823897653 24.906096501065655 27.399913617219095 23.604242057817594 39 24.231188680069092 23.854312257682178 27.749421478845775 24.165077583402955 40 23.705479971512126 25.72023468058134 27.329962392592837 23.244322955313695 41 21.87208874155928 26.012672740186453 27.669493067826075 24.445745450428188 42 25.11274136630674 26.348145182171383 27.370119679560695 21.16899377196118 43 24.856930956474457 23.533671693203377 26.90095384595158 24.70844350437059 44 23.48287116802533 25.383770192434767 27.945685123355002 23.1876735161849 45 25.69345257739734 24.249059862875278 27.095319307277606 22.96216825244978 46 22.46919636775522 24.854525530743608 29.680587290124798 22.995690811376367 47 24.4606697901427 25.159955469331024 27.878833112873636 22.50054162765264 48 24.52164397061274 26.187620995792614 26.964387135928874 22.32634789766577 49 23.4169617422692 25.692650979096364 29.04754579378444 21.842841484849995 50 23.88935325288121 26.218183901087787 26.009739939381372 23.88272290664963 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1745.0 1 1720.5 2 1696.0 3 4416.0 4 7136.0 5 8601.5 6 10067.0 7 9644.0 8 9221.0 9 11978.5 10 14736.0 11 21217.5 12 27699.0 13 53418.5 14 79138.0 15 94646.0 16 110154.0 17 106350.0 18 102546.0 19 86428.5 20 70311.0 21 72175.0 22 74039.0 23 79946.5 24 85854.0 25 101124.5 26 116395.0 27 125721.0 28 135047.0 29 153101.5 30 171156.0 31 192194.5 32 213233.0 33 233518.0 34 253803.0 35 282699.0 36 311595.0 37 341047.0 38 370499.0 39 395141.5 40 419784.0 41 444379.5 42 468975.0 43 492078.5 44 515182.0 45 604465.0 46 693748.0 47 860712.5 48 1027677.0 49 1055358.5 50 1083040.0 51 904553.0 52 726066.0 53 611902.0 54 497738.0 55 517344.0 56 536950.0 57 512881.0 58 488812.0 59 467203.5 60 445595.0 61 376901.5 62 308208.0 63 268742.5 64 229277.0 65 195345.5 66 161414.0 67 146471.0 68 131528.0 69 112985.5 70 94443.0 71 76399.5 72 58356.0 73 55167.0 74 51978.0 75 40564.0 76 29150.0 77 24482.5 78 19815.0 79 16284.5 80 12754.0 81 11316.0 82 9878.0 83 9472.5 84 9067.0 85 7142.0 86 5217.0 87 5150.0 88 5083.0 89 2639.5 90 196.0 91 151.5 92 107.0 93 56.5 94 6.0 95 4.5 96 3.0 97 2.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03133545224413328 2 0.0 3 2.451913321137189E-4 4 0.0017849928977878742 5 0.03133545224413328 6 0.031659104802523395 7 0.05670785129126092 8 0.04621366227679374 9 0.04496809030965606 10 0.05130383433147455 11 0.046959043926419454 12 0.04763577200305332 13 0.03519966763824549 14 0.035366397744082824 15 0.05280440528401051 16 0.03883830700681308 17 0.038681384554260304 18 0.04462482244469685 19 0.04728269648480957 20 0.04495828265637151 21 0.035425243663790115 22 0.0387009998608294 23 0.053765555305896294 24 0.035739088568895676 25 0.043653864769526526 26 0.03042334048867025 27 0.0379360029046346 28 0.03548408958349741 29 0.03666100797764326 30 0.03411101812366058 31 0.038200809543317414 32 0.030129110890133783 33 0.030011419050719197 34 0.03241429410543365 35 0.03686696869661878 36 0.037092544722163404 37 0.031364875203986925 38 0.04190810248487685 39 0.041035221342552004 40 0.03640600899224499 41 0.03928945905790233 42 0.03909330599221135 43 0.03934830497760962 44 0.035562550809773795 45 0.0 46 0.0 47 0.0 48 0.0 49 0.031884680828068016 50 0.0056197853320464385 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1.0196119E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.508137396716762 #Duplication Level Percentage of deduplicated Percentage of total 1 67.83495775857305 20.016832538404515 2 14.691274690449022 8.670243041973544 3 6.697891978639782 5.929269503222093 4 3.4011867565406058 4.014507444955745 5 1.946152954391423 2.871367438660418 6 1.216454163639107 2.153717795848257 7 0.8007862350081912 1.6540797173614858 8 0.5675064196333809 1.3396845923248482 9 0.39911618328748316 1.0599457656330218 >10 2.063970319310202 11.190517509444037 >50 0.18419942563947064 3.7892228761858786 >100 0.1528785213232531 9.341438951845028 >500 0.023483078412955327 4.797483996921421 >1k 0.01767864982890385 10.64808863607693 >5k 0.0014169910078919395 2.8850808092043385 >10k+ 0.0010458743153488124 9.638519381938393 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 110096 1.0797833960156802 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 86574 0.8490877754565243 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 63165 0.6195004197185223 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 57938 0.5682358160001859 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 56546 0.554583562628094 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 50731 0.49755205877844305 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGG 45507 0.4463168780199604 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG 43052 0.4222390892063932 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 40790 0.4000541774767438 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36471 0.35769492294077776 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 33087 0.32450582422586477 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 31563 0.3095589606202125 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 29003 0.28445136821176764 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCC 28197 0.27654639966442135 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC 24727 0.24251384276703716 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 22635 0.22199623209576114 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT 20158 0.19770267490993387 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 17332 0.16998624672779908 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 17259 0.16927028803802702 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 15772 0.15468630760390303 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG 14832 0.1454671135164272 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGT 14474 0.14195597364055873 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 14354 0.14077905524641288 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 13689 0.13425696581218796 No Hit GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTAC 13172 0.12918640906407625 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGC 12821 0.12574392276119964 No Hit GTACATGGGACTGCTGCTAGCTGGAGCTCCTCGCCCTTGCTCACTTTTTC 11565 0.1134255102358064 No Hit GGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 10961 0.10750168765193895 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 10755 0.10548131107532191 No Hit ATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGG 10670 0.10464766054613525 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA 10272 0.10074421453888484 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.198056240810841E-4 0.0 0.0 0.0 0.0 2 5.198056240810841E-4 9.807653284548758E-6 0.0 0.0 0.0 3 5.492285839347305E-4 9.807653284548758E-6 0.0 9.807653284548758E-6 0.0 4 5.492285839347305E-4 9.807653284548758E-6 0.0 9.807653284548758E-6 0.0 5 5.786515437883768E-4 9.807653284548758E-6 0.0 1.9615306569097515E-5 0.0 6 5.786515437883768E-4 9.807653284548758E-6 0.0 1.9615306569097515E-5 0.0 7 5.786515437883768E-4 9.807653284548758E-6 0.0 1.9615306569097515E-5 0.0 8 5.884591970729255E-4 9.807653284548758E-6 0.0 2.9422959853646276E-5 0.0 9 5.884591970729255E-4 9.807653284548758E-6 0.0 6.86535729918413E-5 0.0 10 6.865357299184131E-4 9.807653284548758E-6 0.0 1.863454124064264E-4 0.0 11 7.846122627639007E-4 1.9615306569097515E-5 0.0 2.1576837226007267E-4 0.0 12 7.944199160484494E-4 1.9615306569097515E-5 0.0 2.2557602554462144E-4 0.0 13 7.944199160484494E-4 1.9615306569097515E-5 0.0 2.353836788291702E-4 0.0 14 7.944199160484494E-4 1.9615306569097515E-5 0.0 2.353836788291702E-4 0.0 15 7.944199160484494E-4 1.9615306569097515E-5 0.0 2.9422959853646276E-4 0.0 16 8.630734890402907E-4 1.9615306569097515E-5 0.0 3.4326786495920655E-4 0.0 17 8.728811423248395E-4 1.9615306569097515E-5 0.0 3.726908248128528E-4 0.0 18 9.023041021784858E-4 1.9615306569097515E-5 0.0 4.3153674452014535E-4 0.0 19 9.70957675170327E-4 1.9615306569097515E-5 0.0 4.8057501094288913E-4 0.0 20 0.001010188288308522 1.9615306569097515E-5 0.0 5.099979707965354E-4 0.0 21 0.001137687781007656 1.9615306569097515E-5 0.0 6.276898102111205E-4 0.0 22 0.0011474954342922047 1.9615306569097515E-5 0.0 8.238428759020957E-4 0.0 23 0.0012357643138531434 2.9422959853646276E-5 0.0 0.0010886495145849121 0.0 24 0.001255379620422241 3.923061313819503E-5 0.0 0.0015299939123896062 0.0 25 0.0012848025802758873 3.923061313819503E-5 0.0 0.0016084551386659964 0.0 26 0.0015103786058205087 3.923061313819503E-5 0.0 0.0018438388174951666 0.0 27 0.0015594168722432526 3.923061313819503E-5 0.0 0.0022459526021616654 0.0 28 0.0016084551386659964 3.923061313819503E-5 0.0 0.0036974852882748818 0.0 29 0.0016182627919505452 3.923061313819503E-5 0.0 0.005482478186062756 0.0 30 0.0016476857518041915 3.923061313819503E-5 0.0 0.008493427744419224 0.0 31 0.0017359546313651302 3.923061313819503E-5 0.0 0.012563603857506959 0.0 32 0.001745762284649679 3.923061313819503E-5 0.0 0.016722048850155633 0.0 33 0.001784992897787874 3.923061313819503E-5 0.0 0.021155108134771672 0.0 34 0.001824223510926069 3.923061313819503E-5 0.0 0.026843547039809953 0.0 35 0.0018340311642106178 3.923061313819503E-5 0.0 0.03569985795575748 0.0 36 0.001873261777348813 3.923061313819503E-5 0.0 0.04612539339723281 0.0 37 0.001941915350340654 4.903826642274379E-5 0.0 0.06089571924376324 0.0 38 0.0019811459634788493 4.903826642274379E-5 0.0 0.07584258284941554 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATGCG 1220 0.0 19.657305 19 CGACGAG 1320 0.0 18.66513 24 TGCGACG 1285 0.0 18.31918 22 GTACTAG 1640 0.0 17.712553 1 AATGCGA 1390 0.0 17.568624 20 CGTCGTA 2995 0.0 16.67677 10 GTCGACG 1300 0.0 16.583252 36 CCGTCGT 3055 0.0 16.493284 9 AATTCGT 1390 0.0 16.144062 16 ATCGTCA 1560 0.0 15.797061 10 TCGACGA 1395 0.0 15.45408 37 TACCGTC 3565 0.0 15.18303 7 AGTCGAC 1460 0.0 15.067329 35 AAGTCGA 1510 0.0 15.004947 34 CGACGAA 1435 0.0 14.870004 38 CAATTCG 1540 0.0 14.857817 15 CATTGCG 1220 0.0 14.784365 29 CGAACAA 1445 0.0 14.765938 41 GACGAGT 1665 0.0 14.666037 25 GGCGTTA 2990 0.0 14.566078 42 >>END_MODULE