SRR2431463_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2431463_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3797315
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	40718	1.0722839690676176	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35037	0.9226782608237662	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29287	0.771255479200435	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25938	0.683061584303646	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15483	0.40773546571722386	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9044	0.23816828469589696	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7847	0.20664601172144	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5670	0.1493160298790066	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	13260	61.386723	1
TACCTGG	3530	42.497063	2
GTATCAA	24290	41.29824	1
TATAACG	480	38.209057	2
ATAACGC	535	36.03902	3
GTGGTAT	4585	35.814426	1
GTACCTG	4285	35.357124	1
TGGTATC	4610	35.2954	2
ACCTGGG	4695	31.351019	3
ATCAACG	32165	31.141462	3
TATCAAC	32290	31.020908	2
TCAACGC	32420	30.910614	4
CAACGCA	33725	29.758532	5
AACGCAG	35065	28.807858	6
ACGCAGA	39040	25.778362	7
CGCAGAG	38955	25.774275	8
TAACGCA	830	24.9294	4
GCAGAGT	40835	24.31139	9
CATGGGT	6780	23.374235	4
TTTCGCG	535	22.84378	9