SRR2431459_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2431459_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4074507
Sequences flagged as poor quality	0
Sequence length	100
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	48173	1.1823025460503565	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	41807	1.0260627850191446	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	37149	0.9117422058668693	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31696	0.7779100637205925	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17265	0.4237322453980322	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10305	0.2529140335260192	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8882	0.21798956290908322	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7091	0.1740333247678799	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	15545	56.757755	1
TACCTGG	4490	42.95181	2
GTATCAA	28820	42.223007	1
TATAACG	480	40.177837	2
ATAACGC	545	36.249054	3
GTACCTG	5515	35.323967	1
ACCTGGG	5925	32.23158	3
ATCAACG	38570	31.451807	3
TATCAAC	38670	31.346148	2
TCAACGC	38945	31.221428	4
GTGGTAT	5830	30.671124	1
CAACGCA	40710	29.859192	5
TGGTATC	5990	29.60455	2
AACGCAG	42270	28.878126	6
TCTGTCG	1075	26.234459	8
CGCAGAG	46250	26.088161	8
ACGCAGA	46590	26.039019	7
GCAGAGT	48365	24.60718	9
CATGGGT	10030	24.245634	4
GTATAAC	1205	24.211367	1