SRR2431457_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2431457_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4573485
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	42137	0.9213324193694743	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36984	0.8086612288003568	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26607	0.5817664210115481	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18740	0.40975317509514075	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10819	0.2365592103177336	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8931	0.1952777805109233	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8480	0.1854165915051651	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5501	0.12028026767333883	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	14760	60.573135	1
GTATCAA	27300	42.005455	1
TGGTATC	5180	35.409092	2
GTGGTAT	5260	35.247093	1
ATAACGC	425	34.304626	3
TACCTGG	4325	33.166042	2
ATCAACG	36105	31.601185	3
TATCAAC	36225	31.561415	2
TCAACGC	36570	31.237946	4
CAACGCA	38085	29.968542	5
TATAACG	465	29.330872	2
AACGCAG	39540	28.958649	6
GTACCTG	5195	27.898317	1
GCGGTAT	320	26.468866	1
CGCAGAG	43790	25.79387	8
ACGCAGA	44120	25.728785	7
ACCTGGG	5500	24.968939	3
GCAGAGT	45895	24.293325	9
GTACATG	20180	23.854334	1
TCTGTCG	1245	23.785313	8