SRR2431438_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2431438_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4134399
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	40928	0.9899383199347717	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	34627	0.8375340648060334	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	27531	0.6659008963576084	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25899	0.6264272025994588	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14845	0.35906065186258024	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9035	0.2185323670985795	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7985	0.19313568912918178	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	6813	0.16478815905286354	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	13180	56.059734	1
TACCTGG	4435	47.088436	2
GTATCAA	24320	42.28192	1
TATAACG	510	40.57957	2
ATAACGC	500	39.509743	3
GTACCTG	5510	38.093426	1
GTGGTAT	5000	33.601994	1
TCTGTCG	1345	32.504135	8
ACCTGGG	6370	32.4153	3
TATCAAC	32620	31.31849	2
ATCAACG	32605	31.246342	3
TCAACGC	32970	30.88616	4
TGGTATC	5340	30.388046	2
CAACGCA	34250	29.785755	5
AACGCAG	35560	28.845026	6
TAACGCA	765	27.053047	4
GTATAAC	1120	26.472157	1
CTGTCGC	1665	25.692425	9
ACGCAGA	39955	25.566221	7
CGCAGAG	40060	25.393599	8