SRR2431432_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2431432_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2321354
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29638	1.2767548594484082	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29115	1.2542249049477159	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24061	1.0365071419524985	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20209	0.870569503832677	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12627	0.5439497810329661	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	9435	0.4064438254570393	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6737	0.29021855348214876	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5178	0.22305947304891885	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2456	0.10580032170879582	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	8925	0.0	56.503315	1
TACCTGG	2455	0.0	46.930172	2
TATAACG	250	0.0	45.14491	2
ATAACGC	280	0.0	43.666958	3
GTATCAA	16525	0.0	42.38777	1
GCGGTAT	100	7.003109E-10	42.33795	1
GTACCTG	2825	0.0	40.964157	1
TCTGTCG	815	0.0	34.030125	8
ACCTGGG	3315	0.0	33.762222	3
GTCTCGC	750	0.0	31.361448	1
ATCAACG	22605	0.0	31.01778	3
TATCAAC	22635	0.0	30.914341	2
TCAACGC	22835	0.0	30.725954	4
GTGGTAT	3485	0.0	29.831623	1
CAACGCA	23770	0.0	29.486115	5
GTACGGA	65	0.006150509	28.927824	6
CATGGGT	5020	0.0	28.852575	4
AACGCAG	24580	0.0	28.705688	6
TAACGCA	435	0.0	28.107464	4
TGGTATC	3590	0.0	27.90119	2