SRR2431384_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2431384_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2617901
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	26708	1.0202066464698245	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21480	0.8205046714906331	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15081	0.5760722044110911	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12215	0.4665951844626669	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5973	0.22815988839914114	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4420	0.16883755344453438	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4353	0.16627825116381406	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3925	0.14992927540040665	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	8250	66.506775	1
TATAACG	335	47.715355	2
GTATCAA	17120	47.45576	1
GTGGTAT	2220	40.451008	1
TACCTGG	2400	37.610928	2
TGGTATC	2355	37.531075	2
ATCAACG	22735	35.62852	3
TATCAAC	22810	35.55395	2
TCAACGC	23075	35.123924	4
CAACGCA	23770	34.11673	5
AACGCAG	24785	32.994637	6
ATAACGC	515	32.862663	3
GTACCTG	2810	32.794327	1
ACCTGGG	2810	31.620079	3
ACGCAGA	27925	29.200438	7
GTACACG	355	29.136894	1
CGCAGAG	27975	29.097845	8
TACACGG	360	27.424637	2
GCAGAGT	29660	27.27048	9
GTACATG	15225	26.434153	1