SRR2431379_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2431379_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2349845
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16640	0.7081318129493647	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12541	0.5336947756128595	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8388	0.3569597143641389	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6902	0.2937215007798387	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3096	0.13175337096702122	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2888	0.12290172330515416	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2727	0.11605020756688207	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	6000	0.0	55.46526	1
GTATCAA	12140	0.0	45.76546	1
ATCAACG	15500	0.0	35.567978	3
TCAACGC	15620	0.0	35.23455	4
CAACGCA	16115	0.0	34.239754	5
TATCAAC	16175	0.0	34.112743	2
AACGCAG	16645	0.0	33.234222	6
ACGCAGA	18530	0.0	29.701221	7
CGCAGAG	18815	0.0	29.126425	8
GCAGAGT	20050	0.0	27.051062	9
TACCTGG	1705	0.0	25.636068	2
GTACATG	11945	0.0	23.807198	1
TACATGG	11750	0.0	23.399729	2
GTACCTG	1950	0.0	22.17646	1
GAGTACT	13390	0.0	22.095713	12-13
ACATGGG	12130	0.0	22.085484	3
AGAGTAC	19125	0.0	21.969942	10-11
GCGTATC	150	3.2908498E-5	21.935415	1
CAGAGTA	19545	0.0	21.786394	10-11
AGTACTT	13495	0.0	21.175005	12-13