SRR2431351_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2431351_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3186145
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	28014	0.8792443532858675	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19504	0.6121504200216876	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16206	0.5086397511726554	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5680	0.17827186145012233	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5231	0.16417959634605456	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4491	0.14095403693177805	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3299	0.10354205474013267	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	8920	63.075527	1
GTATCAA	18160	46.14951	1
ATCAACG	24515	33.973705	3
TCAACGC	24830	33.542706	4
TATCAAC	25210	33.14897	2
CAACGCA	25730	32.367397	5
AACGCAG	26590	31.355892	6
ACGCAGA	29460	28.125706	7
CGCAGAG	29805	27.721302	8
GTGGTAT	3055	27.694458	1
TGGTATC	2990	27.352005	2
GCAGAGT	31995	25.471285	9
GTACATG	18785	24.346315	1
TACATGG	18270	23.976648	2
ACATGGG	19055	22.347574	3
AGAGTAC	31185	21.611616	10-11
CAGAGTA	31400	21.493572	10-11
AGTACTT	21975	21.237541	12-13
GAGTACT	22005	21.144514	12-13
CATGGGG	10295	20.909819	4