SRR2431350_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2431350_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2847400
Sequences flagged as poor quality	0
Sequence length	100
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31040	1.090117299992976	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21608	0.7588677389899557	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19586	0.6878555875535576	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19154	0.6726838519350986	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7876	0.2766032169698672	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7511	0.2637845051626045	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5779	0.20295708365526444	No Hit
GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3547	0.12456978295989324	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	8565	57.84158	1
GTATCAA	17250	46.131203	1
TAACGCA	240	43.081673	4
TACACGG	225	41.77617	2
TATAACG	260	39.7677	2
TACCTGG	2085	36.291172	2
GTACACG	255	35.021946	1
ATCAACG	23545	33.65426	3
TCAACGC	23845	33.250553	4
CAACGCA	24480	32.330456	5
TATCAAC	25070	31.700815	2
AACGCAG	25050	31.594793	6
GTACCTG	2485	31.587626	1
ATAACGC	430	29.51049	3
ACGCAGA	27835	28.332304	7
CGCAGAG	28065	28.01638	8
ACCTGGG	2645	27.896847	3
GCAGAGT	29800	26.1802	9
GTGGTAT	3155	25.922495	1
TACATGG	14955	24.198332	2