##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2140381_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7580329 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 24.258132199802937 25.0 18.0 32.0 18.0 33.0 2 26.482602008435254 27.0 18.0 31.0 18.0 33.0 3 28.845727144560612 31.0 27.0 32.0 18.0 33.0 4 29.684554324752924 31.0 29.0 33.0 25.0 33.0 5 30.533766146561714 32.0 31.0 33.0 25.0 33.0 6 34.82901203892337 37.0 34.0 38.0 29.0 38.0 7 35.18125928307333 38.0 35.0 38.0 29.0 38.0 8 36.04468038260608 38.0 37.0 38.0 32.0 38.0 9 36.317118030101334 38.0 37.0 38.0 33.0 38.0 10-11 36.415437311494 38.0 37.5 38.0 33.5 38.0 12-13 36.4707023929964 38.0 38.0 38.0 34.0 38.0 14-15 36.49077757706822 38.0 38.0 38.0 34.0 38.0 16-17 36.51174408129251 38.0 38.0 38.0 34.0 38.0 18-19 36.46678752333837 38.0 38.0 38.0 34.0 38.0 20-21 36.5018181474687 38.0 38.0 38.0 34.0 38.0 22-23 36.5389072122676 38.0 38.0 38.0 34.0 38.0 24-25 36.54576138378665 38.0 38.0 38.0 34.0 38.0 26-27 36.49386029267416 38.0 38.0 38.0 34.0 38.0 28-29 36.47359290079608 38.0 38.0 38.0 34.0 38.0 30-31 36.45955847059364 38.0 38.0 38.0 34.0 38.0 32-33 36.42597724547009 38.0 38.0 38.0 34.0 38.0 34-35 36.40049432876046 38.0 38.0 38.0 34.0 38.0 36-37 36.36975142303465 38.0 38.0 38.0 33.0 38.0 38-39 36.3468849390228 38.0 38.0 38.0 33.0 38.0 40-41 36.35962837225132 38.0 38.0 38.0 33.0 38.0 42-43 36.324447449214915 38.0 37.5 38.0 33.0 38.0 44-45 36.26599477946847 38.0 37.0 38.0 33.0 38.0 46-47 36.221984047551175 38.0 37.0 38.0 33.0 38.0 48-49 36.17883134177714 38.0 37.0 38.0 33.0 38.0 50-51 36.152989033246214 38.0 37.0 38.0 33.0 38.0 52-53 36.12020955213453 38.0 37.0 38.0 33.0 38.0 54-55 36.029846310199616 38.0 37.0 38.0 31.0 38.0 56-57 36.0597487418359 38.0 37.0 38.0 32.5 38.0 58-59 36.04091540645037 38.0 37.0 38.0 31.5 38.0 60-61 36.03491729047719 38.0 37.0 38.0 31.5 38.0 62-63 36.01764616486025 38.0 37.0 38.0 31.0 38.0 64-65 36.02155158705435 38.0 37.0 38.0 31.0 38.0 66-67 36.00821032693676 38.0 37.0 38.0 31.0 38.0 68-69 35.98322542989595 38.0 37.0 38.0 31.0 38.0 70-71 35.960033159522546 38.0 37.0 38.0 31.0 38.0 72-73 35.94592872841163 38.0 37.0 38.0 31.0 38.0 74-75 35.9300661267605 38.0 37.0 38.0 31.0 38.0 76-77 35.92913916177071 38.0 37.0 38.0 31.0 38.0 78-79 35.88922516498138 38.0 37.0 38.0 31.0 38.0 80-81 35.86963623551608 38.0 37.0 38.0 31.0 38.0 82-83 35.76999193673749 38.0 37.0 38.0 30.0 38.0 84-85 35.79200091662923 38.0 37.0 38.0 31.0 38.0 86-87 35.804896568023935 38.0 37.0 38.0 31.0 38.0 88-89 35.812723556627375 38.0 37.0 38.0 31.0 38.0 90-91 35.80204154527847 38.0 37.0 38.0 31.0 38.0 92-93 35.77107472512902 38.0 37.0 38.0 31.0 38.0 94-95 35.77520716379834 38.0 37.0 38.0 31.0 38.0 96-97 35.75040622654764 38.0 37.0 38.0 31.0 38.0 98-99 35.75038016442703 38.0 36.0 38.0 31.0 38.0 100-101 35.21431692459679 38.0 35.0 38.0 29.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 7.0 18 64.0 19 157.0 20 285.0 21 776.0 22 2653.0 23 7413.0 24 16388.0 25 30171.0 26 49233.0 27 72240.0 28 101198.0 29 133728.0 30 169299.0 31 212707.0 32 269224.0 33 350320.0 34 484283.0 35 759477.0 36 1672794.0 37 3247912.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.379994720545774 26.913831840280285 13.517988467255183 24.188184971918766 2 13.966227587219498 20.52837020662296 38.61389129680256 26.891510909354988 3 16.69091881015598 25.963425744773872 32.52316662370321 24.822488821366935 4 13.324025909693365 18.99776381737521 38.338019365650226 29.3401909072812 5 13.82990868860588 36.905942387622105 34.991706703309305 14.272442220462711 6 29.026171426882847 38.983379083332544 18.57638614054695 13.41406334923766 7 25.73067738880463 33.456687697855855 23.1045380747986 17.708096838540914 8 24.17926715318029 37.15950851209756 20.99399643471939 17.667227900002757 9 25.203906057375608 16.749523668431806 21.25256040997693 36.79400986421565 10-11 23.899239729568468 27.137608407234037 28.748475165128056 20.214676698069436 12-13 24.76556096707676 24.550227305437534 29.042347634251758 21.64186409323395 14-15 22.203013879740578 25.77556989940674 26.478956256384123 25.542459964468563 16-17 21.518630738905287 29.05136483648056 27.26371650175283 22.166287922861326 18-19 21.601549220357057 28.09726992060635 28.980655061277684 21.32052579775891 20-21 22.631354538059618 27.071500319123647 28.83240586512059 21.464739277696147 22-23 22.218328796341453 27.17579528079403 28.786209163032687 21.819666759831833 24-25 21.955591948147767 27.395061086602112 28.892149913788963 21.757197051461155 26-27 21.928707178424318 27.492612180447278 28.851437856937185 21.727242784191215 28-29 21.850709816464068 27.36231207979296 28.950524479366834 21.836453624376134 30-31 22.020988480120877 27.15570301355451 28.94726221808714 21.876046288237468 32-33 21.777710192846794 27.543568358240467 28.77364349966061 21.905077949252124 34-35 21.965345499280716 27.40907414903179 28.857630635624098 21.76794971606339 36-37 21.918706286444923 27.316580423305215 29.024767179474907 21.739946110774955 38-39 21.798389600667846 27.323321797682137 29.038539112958876 21.839749488691137 40-41 21.954161769727364 27.19954603975312 29.067352542745706 21.77893964777381 42-43 22.088283637784304 27.18585264384125 28.818286478081095 21.907577240293346 44-45 21.86329518294613 27.459004963458426 28.65790044435828 22.019799409237162 46-47 22.121597085178518 27.147983207820975 28.383886711753824 22.346532995246687 48-49 21.99430650800416 27.361765738978427 28.450422474514276 22.193505278503135 50-51 21.7928828724997 27.467215681527158 28.479282179100345 22.260619266872798 52-53 21.87635207676214 27.43320358950519 28.376415115822475 22.314029217910203 54-55 21.93295077645431 27.25397865753587 28.270571289338946 22.542499276670874 56-57 22.031945602454538 27.19629144544774 28.373317000873243 22.398445951224478 58-59 21.674142732788745 27.368619215639995 28.73812984272061 22.21910820885065 60-61 21.92614088376299 27.34990308772464 28.563662762570086 22.160293265942286 62-63 21.614133261328835 27.861490341347956 28.459959814972418 22.064416582350788 64-65 21.221356720383596 28.036107643031272 28.414299035541863 22.328236601043265 66-67 21.40287332971031 28.414589858627902 27.960862233209383 22.2216745784524 68-69 21.45866125160122 28.40067069362744 27.75536289068578 22.38530516408556 70-71 21.503696972489532 27.81472384837426 27.86336745579352 22.818211723342692 72-73 21.52102035837377 27.525215909928562 27.891419060959066 23.062344670738604 74-75 21.72701312754777 27.346243398093566 27.927127993033814 22.999615481324852 76-77 22.057994080506255 27.233641132826374 27.76542032315576 22.942944463511612 78-79 22.236767946183843 27.229179448041187 27.199074940340985 23.334977665433986 80-81 22.246567372052432 27.415682807004682 27.122853796239877 23.21489602470301 82-83 22.19308765737505 27.48281601869384 27.325162337399394 22.998933986531718 84-85 22.29436422066979 27.55361869803481 27.147782967748146 23.004234113547255 86-87 22.36376307453099 27.888757670589403 27.08637948022928 22.661099774650328 88-89 22.55409636961515 27.63750586294252 27.33218796752597 22.47620979991636 90-91 22.484081329507504 27.57056937868647 27.594201683163096 22.351147608642933 92-93 22.278549315936242 27.24652096764822 27.37043298913779 23.104496727277752 94-95 22.023976420560736 27.294528055181388 27.926902488467565 22.754593035790315 96-97 21.754703060063278 27.54947331563129 28.10777125182891 22.588052372476522 98-99 22.04619886791516 27.797963612740922 28.252683667248707 21.903153852095212 100-101 22.797435018385052 30.47997342922975 25.68018079946827 21.042410752916922 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1364.0 1 1444.0 2 2086.0 3 2736.5 4 3215.5 5 4071.5 6 5125.5 7 6616.0 8 8039.0 9 8928.0 10 8973.0 11 8898.0 12 10004.5 13 12788.5 14 18458.0 15 25231.5 16 29924.0 17 31526.0 18 30559.0 19 28006.0 20 24662.5 21 21899.0 22 21438.0 23 24346.0 24 30307.0 25 40041.5 26 54015.5 27 69712.0 28 85288.5 29 101626.5 30 115723.0 31 130361.5 32 150077.5 33 171908.5 34 190969.5 35 207907.0 36 226990.5 37 245970.5 38 258008.5 39 262815.0 40 270702.0 41 279060.5 42 285011.5 43 292926.5 44 302114.5 45 316461.0 46 325396.5 47 323472.0 48 319502.5 49 310731.5 50 299422.0 51 288220.5 52 273003.0 53 258533.0 54 245524.5 55 229812.5 56 212200.5 57 189833.5 58 166842.0 59 144201.0 60 118961.5 61 93451.0 62 69306.0 63 50671.0 64 36809.0 65 26061.0 66 18932.0 67 14085.0 68 10368.5 69 7128.0 70 4577.5 71 2834.5 72 1723.5 73 995.5 74 589.0 75 365.5 76 238.0 77 157.5 78 105.0 79 71.5 80 47.5 81 33.0 82 26.5 83 17.5 84 9.5 85 5.5 86 6.5 87 7.5 88 4.0 89 1.0 90 0.5 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0032056656116113166 4 0.0 5 0.0491799234571481 6 1.3192039553956034E-5 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 9.234427687769225E-5 18-19 0.0 20-21 1.978856446563521E-5 22-23 0.0 24-25 0.0 26-27 2.3752868818711773E-4 28-29 2.2440252004030006E-4 30-31 6.605093980579703E-6 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 1.1439230099440553E-4 44-45 0.0 46-47 0.0010224564844224324 48-49 0.0015650645736719484 50-51 0.002321595732243731 52-53 0.005637095979195506 54-55 0.0068976353405660554 56-57 0.005789329161309684 58-59 0.007384997953827073 60-61 0.006866065097128333 62-63 0.005401450328045039 64-65 0.005776390814745767 66-67 0.0012928987926682494 68-69 0.0018611596539541528 70-71 4.3014995391927485E-4 72-73 0.0019587791857178195 74-75 0.0022426040107858857 76-77 6.366778419856978E-4 78-79 0.0 80-81 1.7562074105386037E-4 82-83 0.0 84-85 0.0 86-87 8.649444312518576E-5 88-89 0.0 90-91 0.0 92-93 0.0 94-95 7.15350576461562E-4 96-97 4.1684538912725497E-5 98-99 5.689355990762555E-4 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 127.0 20-21 346.0 22-23 611.0 24-25 889.0 26-27 1803.0 28-29 4167.0 30-31 10263.0 32-33 13115.0 34-35 18291.0 36-37 29427.0 38-39 22968.0 40-41 37981.0 42-43 41877.0 44-45 49937.0 46-47 51859.0 48-49 49045.0 50-51 44246.0 52-53 4309.0 54-55 3831.0 56-57 3931.0 58-59 4436.0 60-61 54561.0 62-63 54775.0 64-65 62546.0 66-67 67815.0 68-69 66368.0 70-71 76569.0 72-73 56977.0 74-75 57069.0 76-77 60629.0 78-79 64645.0 80-81 66558.0 82-83 62396.0 84-85 61428.0 86-87 63947.0 88-89 68185.0 90-91 71959.0 92-93 71042.0 94-95 78020.0 96-97 124367.0 98-99 714121.0 100-101 5182893.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 81.37600167550335 #Duplication Level Percentage of deduplicated Percentage of total 1 87.24030839305055 70.99267481964311 2 8.492787682542035 13.822182093684699 3 2.301105335043159 5.617642547999456 4 0.9070742652335102 2.9525630770979236 5 0.4097744632910673 1.667290370567619 6 0.23135688135705793 1.1296138778970706 7 0.12325388690920122 0.7020935955344821 8 0.08423994226236649 0.5484087746149312 9 0.052215962062902355 0.3824213594686885 >10 0.15485587185038283 1.8546363116750342 >50 0.0022441793629383137 0.12560247744798203 >100 6.703475942807078E-4 0.11219227032337198 >500 5.63947244759268E-5 0.0326519952838911 >1k 5.639471608758907E-5 0.060026428761698045 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.638407910791207E-5 2 0.0 2.638407910791207E-5 0.0 0.0 2.638407910791207E-5 3 0.0 3.957611866186811E-5 0.0 0.0 2.638407910791207E-5 4 0.0 2.1107263286329657E-4 0.0 0.0 2.638407910791207E-5 5 0.0 2.242646724172526E-4 0.0 0.0 3.957611866186811E-5 6 0.0 2.242646724172526E-4 0.0 0.0 3.957611866186811E-5 7 0.0 2.242646724172526E-4 0.0 0.0 6.596019776978018E-5 8 0.0 2.242646724172526E-4 0.0 0.0 6.596019776978018E-5 9 0.0 3.5618506795681294E-4 0.0 0.0 6.596019776978018E-5 10-11 0.0 3.5618506795681294E-4 0.0 0.0 6.596019776978018E-5 12-13 0.0 3.5618506795681294E-4 0.0 0.0 6.596019776978018E-5 14-15 0.0 5.540656612661534E-4 0.0 0.0 1.3851641531653836E-4 16-17 0.0 5.936417799280216E-4 0.0 0.0 1.7149651420142847E-4 18-19 0.0 6.332178985898897E-4 0.0 6.596019776978018E-6 1.780925339784065E-4 20-21 0.0 6.793900370287359E-4 0.0 2.638407910791207E-5 2.0447661308631857E-4 22-23 0.0 7.71734313906428E-4 0.0 3.957611866186811E-5 2.4405273174818665E-4 24-25 0.0 8.179064523452743E-4 0.0 6.596019776978018E-5 2.638407910791207E-4 26-27 0.0 8.442905314531863E-4 0.0 1.7149651420142847E-4 2.638407910791207E-4 28-29 0.0 8.442905314531863E-4 0.0 8.706746105610983E-4 3.0341690974098885E-4 30-31 0.0 9.630188874387906E-4 0.0 0.002869268602985438 3.69377107510769E-4 32-33 0.0 9.894029665467026E-4 0.0 0.006767516291179446 4.089532261726371E-4 34-35 0.0 0.001160899480748131 0.0 0.01197837191499208 4.2874128550357115E-4 36-37 0.0 0.0013389920147265375 0.0 0.01982763544959592 4.3533730528054915E-4 38-39 0.0 0.0013719721136114277 0.0 0.04502443099765195 4.4193332505752716E-4 40-41 0.0 0.001503892509150988 0.0 0.274255906306969 5.144895426042854E-4 42-43 0.0 0.001536872608035878 0.0 0.29935376155837035 6.530059579208237E-4 44-45 0.0 0.0017479452408991746 0.0 0.341779360763893 6.925820765826919E-4 46-47 0.0 0.0019260377748775812 0.0 0.3896664643447534 7.123701359136259E-4 48-49 0.0 0.0019458258342085152 0.0 0.43725674703564976 7.25562175467582E-4 50-51 0.0 0.002269030803280438 0.0 0.4868522197387475 7.25562175467582E-4 52-53 0.0 0.0023086069219423063 0.0 0.655321160862543 7.38754215021538E-4 54-55 0.0 0.0023152029417192843 0.0 1.2140502081110198 7.51946254575494E-4 56-57 0.0 0.0023613750801581303 0.0 1.8290367080373424 7.51946254575494E-4 58-59 0.0 0.0023943551790430203 0.0 2.4780652660326483 7.58542274352472E-4 60-61 0.0 0.002466911396589779 0.0 2.9790065840150213 7.783303336834061E-4 62-63 0.0 0.002532871594359559 0.0 2.9893887191439843 8.047144127913182E-4 64-65 0.0 0.0026911760690070314 0.0 2.996149639415387 8.047144127913182E-4 66-67 0.0 0.0026977720887840094 0.0 3.002132229353106 8.113104325682962E-4 68-69 0.0 0.0027571362667768115 0.0 3.0072111645813786 8.245024721222523E-4 70-71 0.0 0.0027835203458847235 0.0 3.0126858609962706 8.376945116762083E-4 72-73 0.0 0.0027901163656617015 0.0 3.016524744506472 8.970586896690104E-4 74-75 0.0 0.002856076563431482 0.0 3.0197765822565223 8.970586896690104E-4 76-77 0.0 0.002987996958971042 0.0 3.0228833075714787 8.970586896690104E-4 78-79 0.0 0.0030605531765178 0.0 3.0256998080162485 8.970586896690104E-4 80-81 0.0 0.003067149196294778 0.0 3.026933263714543 9.168467489999444E-4 82-83 0.0 0.003080341235848734 0.0 3.0274807333560325 9.234427687769225E-4 84-85 0.0 0.0031528974533954926 0.0 3.027843514443766 9.234427687769225E-4 86-87 0.0 0.0031858775522803826 0.0 3.028127143294176 9.366348083308786E-4 88-89 0.0 0.0035222745609062613 0.0 3.0281667194128383 9.828069467697246E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10165 0.0 54.955936 1 GTATCAA 18710 0.0 35.729515 1 ATCAACG 23525 0.0 30.517307 3 TCAACGC 23665 0.0 30.485533 4 TATCAAC 23780 0.0 29.614836 2 CAACGCA 24385 0.0 29.54922 5 AACGCAG 25335 0.0 28.463444 6 ACGCAGA 31135 0.0 23.118618 7 CGCAGAG 31435 0.0 22.883955 8 GTGGTAT 4915 0.0 20.199808 1 TGGTATC 5045 0.0 19.941689 2 GAGTACT 17185 0.0 19.81337 12-13 GCAGAGT 36650 0.0 19.639784 9 TATCTCG 12840 0.0 19.20084 94-95 CAGAGTA 35490 0.0 18.417591 10-11 GTACTTT 18785 0.0 17.797483 14-15 AGAGTAC 33120 0.0 16.606062 10-11 TACATGG 28580 0.0 15.979619 2 ACATGGG 29175 0.0 15.441986 3 GTACATG 29150 0.0 15.243306 1 >>END_MODULE