##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2140295_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8558086 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07005947357855 33.0 31.0 34.0 30.0 34.0 2 32.20619925997472 33.0 31.0 34.0 30.0 34.0 3 32.11483946293599 33.0 31.0 34.0 30.0 34.0 4 35.989320626130656 37.0 35.0 37.0 35.0 37.0 5 35.859698885942485 37.0 35.0 37.0 35.0 37.0 6 35.915049463162674 37.0 35.0 37.0 35.0 37.0 7 35.86733423805276 37.0 35.0 37.0 35.0 37.0 8 35.85955492852023 37.0 35.0 37.0 35.0 37.0 9 37.62020257800634 39.0 37.0 39.0 35.0 39.0 10-11 37.50019636400008 39.0 37.0 39.0 35.0 39.0 12-13 37.47770926817047 39.0 37.0 39.0 34.5 39.0 14-15 38.78336184048629 40.0 38.0 41.0 35.0 41.0 16-17 38.63094645227917 40.0 38.0 41.0 34.0 41.0 18-19 38.6906862118469 40.0 38.0 41.0 34.0 41.0 20-21 38.71498700870431 40.0 38.0 41.0 34.0 41.0 22-23 38.640019661139334 40.0 38.0 41.0 34.0 41.0 24-25 38.58430285616142 40.0 38.0 41.0 34.0 41.0 26-27 38.379973555868645 40.0 38.0 41.0 34.0 41.0 28-29 38.27263573509592 40.0 38.0 41.0 34.0 41.0 30-31 38.16045172020981 40.0 38.0 41.0 33.5 41.0 32-33 37.98629372922585 40.0 37.0 41.0 33.0 41.0 34-35 38.08295525603141 40.0 38.0 41.0 33.0 41.0 36-37 38.060138603581805 40.0 37.5 41.0 33.0 41.0 38-39 38.01513127164806 40.0 37.0 41.0 33.0 41.0 40-41 37.946197272908215 40.0 37.0 41.0 33.0 41.0 42-43 38.01260290962399 40.0 37.0 41.0 33.0 41.0 44-45 38.01670752423517 40.0 37.0 41.0 33.0 41.0 46-47 37.95281955237126 40.0 37.0 41.0 33.0 41.0 48-49 37.86079755902123 40.0 37.0 41.0 33.0 41.0 50-51 37.74193284718743 40.0 37.0 41.0 32.5 41.0 52-53 37.56967880860038 40.0 36.0 41.0 32.0 41.0 54-55 37.41645365574327 39.0 36.0 41.0 32.0 41.0 56-57 37.274976457860646 39.0 36.0 41.0 31.0 41.0 58-59 37.10083520365794 39.0 35.0 41.0 31.0 41.0 60-61 36.9068703093146 39.0 35.0 40.0 31.0 41.0 62-63 36.68378897115628 38.0 35.0 40.0 31.0 41.0 64-65 36.3735897294313 38.0 35.0 40.0 30.5 41.0 66-67 36.06912904570633 37.0 34.5 40.0 30.0 41.0 68-69 35.749710393062784 37.0 34.0 39.5 30.0 41.0 70-71 35.427913624305596 36.0 34.0 39.0 29.0 41.0 72-73 35.13600787145078 36.0 34.0 39.0 29.0 40.0 74-75 34.80204042108369 35.0 34.0 38.5 29.0 40.0 76-77 33.540400201817576 34.5 32.0 36.5 28.0 39.0 78-79 34.23520356665655 35.0 33.0 37.0 29.0 39.0 80-81 34.145343085949975 35.0 33.5 36.5 29.0 39.0 82-83 33.92186349938085 35.0 33.0 36.0 29.0 37.5 84-85 33.68983426653173 35.0 33.0 36.0 29.0 37.0 86-87 33.49583815165046 35.0 33.0 35.0 29.0 37.0 88-89 33.331577432322284 35.0 33.0 35.0 29.0 36.0 90-91 33.20963160147612 35.0 33.0 35.0 29.0 36.0 92-93 33.1614221214084 35.0 33.0 35.0 29.0 36.0 94-95 33.09466809395293 35.0 33.0 35.0 29.0 35.5 96-97 33.13360680943376 35.0 33.0 35.0 29.0 35.0 98-99 33.250345819182414 35.0 33.0 35.0 29.0 35.0 100 32.00646340979741 34.0 31.0 35.0 26.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 4.0 19 10.0 20 51.0 21 247.0 22 1219.0 23 4342.0 24 11742.0 25 25300.0 26 46498.0 27 74207.0 28 108763.0 29 144551.0 30 184889.0 31 229218.0 32 284131.0 33 357661.0 34 474038.0 35 651834.0 36 1000975.0 37 1688863.0 38 2100100.0 39 1126327.0 40 43115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.93045033667575 19.96010556566036 13.498625744120824 24.61081835354307 2 15.214593543462874 21.055221926958904 40.09193177072537 23.638252758852857 3 18.711957632439233 25.16015025373166 30.199156186970942 25.928735926858167 4 12.977773301179726 17.26667621708873 37.990141720940876 31.76540876079067 5 13.466994839734026 37.6518885180635 35.538156545751 13.342960096451472 6 31.407010866682107 37.14711443656911 18.078236185053527 13.367638511695255 7 27.568711041230483 32.05595269783454 22.550158995831545 17.825177265103438 8 25.180081153659827 36.50785935079409 20.66465562510122 17.647403870444865 9 25.73085851205515 16.462769829609098 20.91092564388813 36.89544601444762 10-11 24.844480413026933 26.39520682545139 28.538787761656053 20.221524999865625 12-13 25.204607665779477 23.78562800140125 28.835197496262598 22.17456683655668 14-15 22.27026580476055 25.35278916337134 26.080650509938785 26.29629452192932 16-17 22.196580220337502 28.530940175034903 26.862380057507547 22.41009954712005 18-19 22.194272287544337 27.940412458303935 28.326617403007937 21.53869785114379 20-21 22.870245716676855 27.130186638291715 28.132829495676624 21.866738149354802 22-23 22.727296897035405 26.9945736757978 27.972054123588602 22.306075303578197 24-25 22.53537030176334 27.114212707423686 28.004996280316995 22.34542071049598 26-27 22.510393855204143 27.238674818764995 27.93206239078931 22.31886893524155 28-29 22.43199271632125 27.3439879369922 27.937559774526612 22.286459572159938 30-31 22.590208554309182 27.17713377092413 27.91376291507119 22.318894759695507 32-33 22.35632183232225 27.325219113681587 27.92954636562272 22.388912688373445 34-35 22.554261323575563 27.280597634966615 27.90002631986074 22.265114721597083 36-37 22.566307428334095 27.240796939411467 27.800041105790896 22.392854526463545 38-39 22.481576526180756 27.36722258836713 27.890532450515064 22.26066843493705 40-41 22.595864009621117 27.258464456840425 27.774745995172896 22.370925538365565 42-43 22.47499307183456 27.448891597162508 27.595519985486515 22.48059534551642 44-45 22.647443588461226 27.397376453864364 27.553368924934894 22.40181103273951 46-47 22.5799502000589 27.40930593645028 27.405200279134856 22.605543584355964 48-49 22.49101566420576 27.605504633976093 27.34511184024538 22.558367861572773 50-51 22.50575682283508 27.53181093671495 27.379883808741507 22.582548431708464 52-53 22.628882106233263 27.50239855754647 27.213098684208838 22.65562065201143 54-55 22.6349682756642 27.403208258189792 27.329057682819535 22.63276578332647 56-57 22.649275959791986 27.47301168526386 27.27873352394612 22.598978830998036 58-59 22.52097617278947 27.604326538859915 27.309096119305902 22.565601169044708 60-61 22.65399277547094 27.54690577012542 27.311065426602276 22.488036027801368 62-63 22.701534123744455 27.614247772766877 27.16226833821483 22.52194976527384 64-65 22.602879887924345 27.566612707925415 27.19732678039305 22.63318062375719 66-67 22.68901644050686 27.532366603179515 27.097088660677215 22.681528295636404 68-69 22.510299719028573 27.547962631932354 27.220749792964906 22.720987856074167 70-71 22.516804273127775 27.43228770643727 27.244278568403118 22.80662945203183 72-73 22.634851221352513 27.485170823983317 27.14949226871916 22.730485685945006 74-75 22.506363219298855 27.61073459153507 27.183352178544006 22.699550010622065 76-77 22.622816679036912 27.513061775076736 27.116405111552353 22.747716434333995 78-79 22.494463208482465 27.50354649653939 27.138788533959175 22.863201761018974 80-81 22.561886406139568 27.529902690767273 27.16044561587771 22.74776528721545 82-83 22.48906150988797 27.623060555275636 27.28966745317455 22.598210481661845 84-85 22.629431860928957 27.583240248392006 27.15928754240907 22.628040348269966 86-87 22.49887650581919 27.55797809357798 27.25843219727399 22.684713203328837 88-89 22.553720768669777 27.509589807957386 27.199094319476114 22.73759510389672 90-91 22.5272228503226 27.59763887765828 27.197510282036685 22.677627989982426 92-93 22.60284127456637 27.511468682086793 27.287321442977465 22.598368600369376 94-95 22.352054035949955 27.646411274614962 27.353678777409744 22.647855912025346 96-97 22.354784585313894 27.725609745484668 27.496740887975314 22.422864781226124 98-99 23.5702467482785 29.710453328232596 27.540311782708493 19.17898814078041 100 30.289157582197863 41.23168575191502 28.479156665887118 0.0 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1198.0 1 1091.5 2 1505.0 3 2151.5 4 2803.0 5 4465.5 6 5978.0 7 7017.5 8 7731.0 9 7671.5 10 7099.0 11 6397.5 12 6694.0 13 8617.5 14 13229.5 15 19604.0 16 25220.5 17 29124.0 18 30906.5 19 31001.5 20 30334.0 21 29650.0 22 30338.5 23 33920.5 24 40521.0 25 50370.0 26 63512.0 27 78585.0 28 94006.5 29 111779.5 30 131044.5 31 151548.0 32 174341.5 33 196344.5 34 217098.5 35 236795.5 36 259620.5 37 282057.5 38 297401.5 39 306848.0 40 318459.5 41 333433.5 42 345014.5 43 356291.0 44 366765.0 45 374279.0 46 379119.0 47 383358.0 48 386363.5 49 384934.0 50 378196.5 51 367703.5 52 354112.5 53 338151.0 54 320691.0 55 299572.5 56 276422.0 57 252607.5 58 226410.0 59 195550.5 60 164143.5 61 135473.0 62 109527.0 63 86279.5 64 66305.0 65 51000.5 66 39034.0 67 30254.0 68 23211.0 69 17308.0 70 12870.5 71 9454.0 72 6804.5 73 4669.5 74 3295.0 75 2324.5 76 1563.0 77 996.5 78 651.0 79 465.0 80 337.0 81 222.5 82 154.5 83 108.0 84 72.0 85 52.5 86 40.5 87 29.0 88 18.0 89 8.5 90 3.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 3.3886081537390486E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 9.172611726500527E-4 18-19 0.003785893247625696 20-21 0.0 22-23 0.0013965146966518824 24-25 4.733960203174559E-4 26-27 0.013301008666644916 28-29 0.007214113122208481 30-31 6.916437593862799E-4 32-33 0.0069492539840625735 34-35 0.004721887050218862 36-37 0.001976885870460546 38-39 0.0013947232650555438 40-41 0.0037688653909258647 42-43 0.00819242544435679 44-45 0.009853648682936682 46-47 0.009045334130718159 48-49 0.008158463955906243 50-51 0.033569132291416746 52-53 0.012656915525121791 54-55 1.2994038205331012E-4 56-57 0.008177459139305676 58-59 0.00658238468837689 60-61 1.0075479446727211E-4 62-63 0.005167579300103331 64-65 0.0025879206572357438 66-67 0.023966043359718435 68-69 0.03167545661759408 70-71 0.015278968197827555 72-73 0.01136421413290542 74-75 0.016373156999703143 76-77 0.002138901281814036 78-79 0.0029349454772266154 80-81 0.001657375525422097 82-83 0.024093513207019197 84-85 0.0010183592289388153 86-87 0.009852512615354204 88-89 9.042000090420001E-4 90-91 0.0029203238842552813 92-93 0.00115128621447402 94-95 8.201854227852923E-4 96-97 0.0029326796851537745 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 195.0 20-21 612.0 22-23 1350.0 24-25 3044.0 26-27 4741.0 28-29 11946.0 30-31 24702.0 32-33 30830.0 34-35 43077.0 36-37 65440.0 38-39 75661.0 40-41 74641.0 42-43 80539.0 44-45 91736.0 46-47 91204.0 48-49 85760.0 50-51 79224.0 52-53 77098.0 54-55 82731.0 56-57 84707.0 58-59 84304.0 60-61 81831.0 62-63 78681.0 64-65 82577.0 66-67 86956.0 68-69 87117.0 70-71 84375.0 72-73 80739.0 74-75 82904.0 76-77 82397.0 78-79 87752.0 80-81 89074.0 82-83 86673.0 84-85 87046.0 86-87 93116.0 88-89 100040.0 90-91 107774.0 92-93 119129.0 94-95 145307.0 96-97 326811.0 98-99 1818280.0 100-101 3655965.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 85.7364348063511 #Duplication Level Percentage of deduplicated Percentage of total 1 90.26343808846413 77.38865375068713 2 6.728329864170063 11.537260295100834 3 1.6933961203059387 4.355572382098139 4 0.6047689709564702 2.074029418052538 5 0.2737523537056844 1.1735275413286288 6 0.14344978656323706 0.7379323964198371 7 0.08891541934516181 0.5336303737776084 8 0.052088875575324975 0.3572731587919987 9 0.03688289752071759 0.28459873248788986 >10 0.11335924792275685 1.4404333186474756 >50 0.0013849113039326624 0.07862382823790985 >100 2.118430603691902E-4 0.028565957934827704 >500 2.1621106185042077E-5 0.00989884643507279 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1684855702548443E-5 0.0 0.0 0.0 0.0 2 1.1684855702548443E-5 0.0 0.0 0.0 1.1684855702548443E-5 3 1.1684855702548443E-5 0.0 0.0 0.0 1.1684855702548443E-5 4 1.1684855702548443E-5 5.8424278512742215E-5 0.0 0.0 1.1684855702548443E-5 5 2.3369711405096886E-5 5.8424278512742215E-5 0.0 0.0 1.1684855702548443E-5 6 2.3369711405096886E-5 5.8424278512742215E-5 0.0 0.0 2.3369711405096886E-5 7 2.3369711405096886E-5 5.8424278512742215E-5 0.0 0.0 2.3369711405096886E-5 8 2.3369711405096886E-5 5.8424278512742215E-5 0.0 0.0 3.505456710764533E-5 9 2.3369711405096886E-5 1.1684855702548443E-4 0.0 1.1684855702548443E-5 4.673942281019377E-5 10-11 8.17939899178391E-5 1.1684855702548443E-4 0.0 1.1684855702548443E-5 4.673942281019377E-5 12-13 1.0516370132293599E-4 1.1684855702548443E-4 0.0 1.1684855702548443E-5 4.673942281019377E-5 14-15 1.1684855702548443E-4 1.5190312413312977E-4 0.0 1.1684855702548443E-5 8.17939899178391E-5 16-17 1.285334127280329E-4 1.5774555198440397E-4 0.0 1.1684855702548443E-5 9.347884562038754E-5 18-19 1.285334127280329E-4 1.6943040768695243E-4 0.0 1.1684855702548443E-5 9.347884562038754E-5 20-21 1.4021826843058132E-4 1.7527283553822666E-4 0.0 1.1684855702548443E-5 9.347884562038754E-5 22-23 1.5774555198440397E-4 2.161698304971462E-4 0.0 2.3369711405096886E-5 1.0516370132293599E-4 24-25 1.7527283553822663E-4 2.512243976047915E-4 0.0 5.8424278512742215E-5 1.1684855702548443E-4 26-27 1.9280011909204932E-4 2.570668254560658E-4 0.0 9.932127347166177E-5 1.1684855702548443E-4 28-29 1.9864254694332354E-4 2.570668254560658E-4 1.1684855702548443E-5 5.141336509121314E-4 1.1684855702548443E-4 30-31 2.3369711405096886E-4 3.15491103968808E-4 1.1684855702548443E-5 0.002050692175797252 1.2269098487675866E-4 32-33 2.3369711405096886E-4 3.3886081537390486E-4 1.1684855702548443E-5 0.0047966332658961365 1.5190312413312977E-4 34-35 2.6290925330734E-4 3.914426660353729E-4 1.1684855702548443E-5 0.008389726394429782 1.635879798356782E-4 36-37 2.921213925637111E-4 4.323396609942924E-4 1.1684855702548443E-5 0.014121148116529793 1.635879798356782E-4 38-39 2.921213925637111E-4 4.4402451669684086E-4 1.1684855702548443E-5 0.022604353356579964 1.635879798356782E-4 40-41 3.0380624826625954E-4 4.790790838044862E-4 1.1684855702548443E-5 0.03198145005787509 1.635879798356782E-4 42-43 3.0380624826625954E-4 5.02448795209583E-4 1.1684855702548443E-5 0.040745091834786425 1.6943040768695243E-4 44-45 3.0380624826625954E-4 5.78400357276148E-4 1.1684855702548443E-5 0.05032667351087615 1.811152633895009E-4 46-47 3.0380624826625954E-4 6.30982207937616E-4 1.1684855702548443E-5 0.06157334712457902 1.869576912407751E-4 48-49 3.0380624826625954E-4 6.30982207937616E-4 1.1684855702548443E-5 0.07192028684918567 1.869576912407751E-4 50-51 3.15491103968808E-4 6.835640585990839E-4 1.1684855702548443E-5 0.08180567477354164 1.869576912407751E-4 52-53 3.15491103968808E-4 6.894064864503581E-4 1.1684855702548443E-5 0.09162095356368236 2.1032740264587197E-4 54-55 3.15491103968808E-4 6.894064864503581E-4 1.1684855702548443E-5 0.10147712934878195 2.3369711405096886E-4 56-57 3.15491103968808E-4 6.894064864503581E-4 1.1684855702548443E-5 0.11027582569280095 2.3369711405096886E-4 58-59 3.15491103968808E-4 6.952489143016323E-4 1.1684855702548443E-5 0.11870644908218964 2.512243976047915E-4 60-61 3.271759596713564E-4 7.010913421529066E-4 1.1684855702548443E-5 0.12648272055223564 2.6875168115861423E-4 62-63 3.271759596713564E-4 7.186186257067293E-4 1.1684855702548443E-5 0.1339201312069077 2.8043653686116263E-4 64-65 3.271759596713564E-4 7.828853320707458E-4 1.1684855702548443E-5 0.14143349342364636 2.8043653686116263E-4 66-67 3.271759596713564E-4 7.945701877732942E-4 1.1684855702548443E-5 0.1491747103265847 2.8627896471243683E-4 68-69 3.3886081537390486E-4 8.120974713271168E-4 1.1684855702548443E-5 0.15698019393588708 2.921213925637111E-4 70-71 3.3886081537390486E-4 8.237823270296653E-4 1.1684855702548443E-5 0.16349450099005783 2.921213925637111E-4 72-73 3.3886081537390486E-4 8.296247548809395E-4 1.1684855702548443E-5 0.16844887980793838 3.15491103968808E-4 74-75 3.3886081537390486E-4 8.41309610583488E-4 1.1684855702548443E-5 0.1719368092351491 3.15491103968808E-4 76-77 3.3886081537390486E-4 8.70521749839859E-4 1.1684855702548443E-5 0.1756233812093031 3.15491103968808E-4 78-79 3.3886081537390486E-4 8.938914612449559E-4 1.1684855702548443E-5 0.1780304614840281 3.15491103968808E-4 80-81 3.3886081537390486E-4 9.055763169475044E-4 1.1684855702548443E-5 0.17880750438824755 3.15491103968808E-4 82-83 3.3886081537390486E-4 9.114187447987786E-4 1.1684855702548443E-5 0.17924568647709313 3.505456710764533E-4 84-85 3.3886081537390486E-4 9.114187447987786E-4 1.1684855702548443E-5 0.17941511688478007 3.505456710764533E-4 86-87 3.3886081537390486E-4 9.23103600501327E-4 1.1684855702548443E-5 0.17949106844684665 3.5638809892772757E-4 88 3.3886081537390486E-4 9.46473311906424E-4 1.1684855702548443E-5 0.1795027533025492 3.739153824815502E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8740 0.0 38.473347 1 GTATCAA 14770 0.0 31.146423 1 TCAACGC 15470 0.0 28.5636 4 ATCAACG 15585 0.0 28.379307 3 CAACGCA 15835 0.0 27.853092 5 AACGCAG 16420 0.0 26.986399 6 TATCAAC 16855 0.0 26.583666 2 TATACCG 510 0.0 23.460737 5 ACGCAGA 19615 0.0 22.590704 7 CGCAGAG 20000 0.0 22.093945 8 GTACATG 22190 0.0 21.159176 1 TACATGG 22310 0.0 20.527555 2 CGTCGAA 340 6.7422996E-5 19.98585 94 ACATGGG 22800 0.0 19.760666 3 GCAGAGT 24945 0.0 17.714127 9 CATGGGG 18175 0.0 17.229836 4 GAGTACT 12225 0.0 17.213356 12-13 AGAGTAC 21485 0.0 16.351946 10-11 CAGAGTA 23920 0.0 15.946519 10-11 GTGGTAT 5045 0.0 15.620179 1 >>END_MODULE