##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2140265_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8214916 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.603299412921565 33.0 33.0 33.0 33.0 33.0 2 32.636822214615464 33.0 33.0 33.0 33.0 33.0 3 32.67076766214043 33.0 33.0 33.0 33.0 33.0 4 36.59482458493793 37.0 37.0 37.0 37.0 37.0 5 36.60833646990426 37.0 37.0 37.0 37.0 37.0 6 36.59334130744612 37.0 37.0 37.0 37.0 37.0 7 36.57217286214491 37.0 37.0 37.0 37.0 37.0 8 36.55428698236233 37.0 37.0 37.0 37.0 37.0 9 36.58443932962918 37.0 37.0 37.0 37.0 37.0 10-11 36.564249165785746 37.0 37.0 37.0 37.0 37.0 12-13 36.55737879729993 37.0 37.0 37.0 37.0 37.0 14-15 38.62973814948321 40.0 37.0 40.0 37.0 40.0 16-17 38.56616160165241 40.0 37.0 40.0 37.0 40.0 18-19 38.597907817925346 40.0 37.0 40.0 37.0 40.0 20-21 38.61226870550095 40.0 37.0 40.0 37.0 40.0 22-23 38.60441563638555 40.0 37.0 40.0 37.0 40.0 24-25 38.605950569719454 40.0 37.0 40.0 37.0 40.0 26-27 38.53146188529338 40.0 37.0 40.0 37.0 40.0 28-29 38.42432482267888 40.0 37.0 40.0 37.0 40.0 30-31 38.28904972538923 40.0 37.0 40.0 37.0 40.0 32-33 38.17198490227783 40.0 37.0 40.0 37.0 40.0 34-35 38.13127588078841 40.0 37.0 40.0 37.0 40.0 36-37 38.10940942744325 40.0 37.0 40.0 37.0 40.0 38-39 38.072867843754636 40.0 37.0 40.0 37.0 40.0 40-41 38.04498676548465 40.0 37.0 40.0 37.0 40.0 42-43 38.004916879675946 40.0 37.0 40.0 33.0 40.0 44-45 37.90334317012412 40.0 37.0 40.0 33.0 40.0 46-47 37.81637832376535 40.0 37.0 40.0 33.0 40.0 48-49 37.74958182458667 40.0 37.0 40.0 33.0 40.0 50-51 37.72430628357629 40.0 37.0 40.0 33.0 40.0 52-53 37.678635810263785 40.0 37.0 40.0 33.0 40.0 54-55 37.57430362795391 40.0 37.0 40.0 33.0 40.0 56-57 37.40802822511253 40.0 37.0 40.0 33.0 40.0 58-59 37.18774902491673 38.5 37.0 40.0 33.0 40.0 60-61 37.033750388901495 37.0 37.0 40.0 33.0 40.0 62-63 36.912374510821365 37.0 37.0 40.0 33.0 40.0 64-65 36.73948054492343 37.0 37.0 40.0 33.0 40.0 66-67 36.521701386227754 37.0 37.0 40.0 33.0 40.0 68-69 36.31535811952335 37.0 37.0 40.0 33.0 40.0 70-71 36.08305623641559 37.0 37.0 38.5 33.0 40.0 72-73 35.7837687385628 37.0 35.0 37.0 33.0 40.0 74-75 35.4424869161048 37.0 33.0 37.0 33.0 40.0 76-77 33.19336021621166 35.0 33.0 37.0 27.0 37.0 78-79 34.95210117111766 37.0 33.0 37.0 33.0 37.0 80-81 35.192106869703615 37.0 33.0 37.0 33.0 37.0 82-83 35.04856204954169 37.0 33.0 37.0 33.0 37.0 84-85 34.87810172120475 37.0 33.0 37.0 33.0 37.0 86-87 34.75684971211186 37.0 33.0 37.0 33.0 37.0 88-89 34.64660392565342 37.0 33.0 37.0 33.0 37.0 90-91 34.57748943439541 37.0 33.0 37.0 33.0 37.0 92-93 34.49646698302544 37.0 33.0 37.0 33.0 37.0 94-95 34.49488592712718 37.0 33.0 37.0 33.0 37.0 96-97 34.53537303108689 37.0 33.0 37.0 33.0 37.0 98-99 34.54447592643899 37.0 33.0 37.0 33.0 37.0 100 34.47056044439286 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 7.0 20 34.0 21 207.0 22 852.0 23 2429.0 24 6103.0 25 12917.0 26 22943.0 27 37575.0 28 56515.0 29 80985.0 30 112728.0 31 152341.0 32 205670.0 33 279997.0 34 390690.0 35 577833.0 36 1026056.0 37 2457776.0 38 2729596.0 39 61662.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.317062767288185 20.568134841549202 15.159461155780535 22.95534123538208 2 14.381028989790737 20.4555458550155 43.11505251681945 22.048372638374307 3 18.535782958705845 26.000387587651534 30.23374797745954 25.23008147618308 4 12.566287957174485 17.840133727478165 38.914676668635444 30.67890164671191 5 13.294694674905989 37.43046185743104 35.55409452756425 13.720748940098717 6 29.65991374713996 37.77309469749904 18.65481034742169 13.912181207939314 7 26.357007180596852 32.683036564220494 23.14499624828787 17.814960006894776 8 23.66429553266278 37.68208950645387 20.843317204947684 17.810297755935668 9 24.855214587708506 17.77978009756886 22.014065633781282 35.35093968094135 10-11 24.107245892715152 27.230418424241954 28.433735658404785 20.228600024638112 12-13 24.77853907738636 24.611069260057686 29.179879371575186 21.430512290980772 14-15 21.876568610963666 26.005348957679985 27.107581658459296 25.010500772897053 16-17 20.995747248054634 29.336027294740447 27.886584598065273 21.781640859139642 18-19 21.024128548605976 28.079970629036254 30.15997972468617 20.7359210976716 20-21 21.676545645899477 27.146288202031865 30.36522063682576 20.811945515242893 22-23 21.49266714451592 26.97015877074041 30.311262480768093 21.225911603975582 24-25 21.289968502782582 27.162836936569867 30.324388704839194 21.222805855808353 26-27 21.104142876137143 27.306254363606165 30.356111679813342 21.23349108044335 28-29 21.06431205097212 27.292004054905146 30.37704706743032 21.266636826692416 30-31 21.277815538428445 27.278800365479178 30.213626458467008 21.229757637625372 32-33 21.095635793315985 27.457560195638113 30.122224925156566 21.32457908588934 34-35 21.237766697229308 27.429945876369043 30.133339346593512 21.198948079808137 36-37 21.24884622041923 27.38710736587155 30.027609516333385 21.336436897375837 38-39 21.125987252846066 27.56430180586434 30.044199398946585 21.265511542343006 40-41 21.34172040901782 27.464105090618713 29.909582093873606 21.284592406489867 42-43 21.269537267228092 27.63218329794541 29.55062955277023 21.547649882056266 44-45 21.31390926815668 27.73321777547335 29.355146771728442 21.597726184641527 46-47 21.504626462575207 27.774857308532468 29.016935672761836 21.70358055613049 48-49 21.49272992567569 27.985605988340517 28.72167391409779 21.799990171886005 50-51 21.511238373750192 28.09131325913486 28.6215960688668 21.775852298248143 52-53 21.722241310409522 28.004781683228863 28.472413674243075 21.80056333211854 54-55 21.693038991773463 27.894545244651308 28.50201826341453 21.9103975001607 56-57 21.600055791111423 28.073290817706308 28.493725184000713 21.83292820718156 58-59 21.616408273578852 28.05078978044766 28.442209230980364 21.89059271499313 60-61 21.718063331718767 28.04291241325846 28.464469029090683 21.77455522593209 62-63 21.702335185964056 28.146702350358748 28.405705155840344 21.74525730783685 64-65 21.728018975752143 28.044592582656918 28.317442404769434 21.90994603682151 66-67 21.778042803898305 28.01009026055531 28.222080669676767 21.98978626586961 68-69 21.656899115745617 28.079483549392776 28.292196899215366 21.971420435646237 70-71 21.794842596858448 27.90253928157404 28.283095472655162 22.019522648912346 72-73 21.86488131159356 27.983603887709325 28.10472030576177 22.046794494935344 74-75 21.688514451535916 28.12731372964519 28.121231016630706 22.06294080218819 76-77 21.879313412263183 28.035549451666075 28.05962986613158 22.025507269939165 78-79 21.79359719234773 27.929981770788036 28.06267939371662 22.213741643147614 80-81 21.792120434689025 28.088784496377688 28.014000161288173 22.105094907645118 82-83 21.956318298389192 27.974266575449715 28.04322073893049 22.026194387230603 84-85 21.935599186438637 28.03985650382864 27.95363949403506 22.070904815697666 86-87 21.902682277263505 28.062189777428532 28.021762245085576 22.01336570022239 88-89 21.96572152301062 28.002007849538664 27.935051862780753 22.097218764669968 90-91 21.966355156757928 28.046110028994743 27.908710207129968 22.07882460711737 92-93 21.991556300213276 28.003982362847967 27.95627084280851 22.048190494130242 94-95 21.91393847642702 28.03536149415401 27.933827962532465 22.116872066886508 96-97 22.085167299397128 28.11214201501252 27.9201822545413 21.88250843104905 98-99 23.173834077757142 30.03842772423941 28.087403753088097 18.700334444915352 100 22.18593057469586 30.81934660866542 21.94681983994257 25.04790297669615 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3311.0 1 2771.0 2 3172.5 3 4307.5 4 5438.5 5 8508.0 6 11354.0 7 13658.5 8 15906.0 9 16497.0 10 15264.0 11 13398.0 12 13623.0 13 17510.0 14 27901.0 15 42975.0 16 56325.0 17 65364.0 18 68114.0 19 64141.0 20 56300.0 21 47326.0 22 40155.0 23 37876.5 24 41141.0 25 49397.0 26 61489.0 27 75386.0 28 91422.0 29 111053.5 30 131777.0 31 152163.0 32 174081.5 33 195799.0 34 216439.5 35 236103.0 36 258807.5 37 279342.5 38 295760.5 39 311557.0 40 324013.0 41 333875.0 42 339221.5 43 347199.0 44 355848.0 45 361983.0 46 364301.5 47 360896.0 48 356358.0 49 347051.0 50 333663.0 51 316154.0 52 293795.0 53 266793.5 54 237185.0 55 209543.0 56 183906.0 57 158793.5 58 136222.0 59 115720.0 60 95302.5 61 77416.5 62 61149.0 63 47227.0 64 35627.0 65 26306.0 66 20256.5 67 15708.0 68 11984.5 69 8744.5 70 6260.0 71 4610.5 72 3251.5 73 2341.5 74 1705.5 75 1136.5 76 751.0 77 503.5 78 345.0 79 243.0 80 184.5 81 137.0 82 103.0 83 68.0 84 40.0 85 27.0 86 22.0 87 20.0 88 18.5 89 15.0 90 9.5 91 7.0 92 4.5 93 2.5 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 2.9215149613215764E-4 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.007303787403303941 14-15 5.416975657450423E-4 16-17 0.0 18-19 0.0 20-21 0.0 22-23 3.6523496387004427E-5 24-25 4.2619737870346495E-5 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.002787999762744284 36-37 0.03173539481604386 38-39 0.13908306394280218 40-41 0.18904539749437632 42-43 0.05870891556657044 44-45 0.006755136884239472 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 6.695731946281213E-6 62-63 0.011995176037805234 64-65 0.0766354335574797 66-67 0.20484064112800018 68-69 0.22178131488452968 70-71 0.08776125098611372 72-73 0.005739053649697848 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 146.0 20-21 591.0 22-23 1273.0 24-25 2791.0 26-27 3885.0 28-29 6519.0 30-31 14892.0 32-33 18977.0 34-35 26008.0 36-37 37147.0 38-39 45311.0 40-41 50141.0 42-43 61910.0 44-45 73081.0 46-47 72472.0 48-49 60898.0 50-51 52680.0 52-53 50447.0 54-55 52003.0 56-57 51086.0 58-59 52527.0 60-61 51980.0 62-63 50642.0 64-65 56912.0 66-67 62638.0 68-69 57645.0 70-71 59208.0 72-73 57822.0 74-75 58219.0 76-77 53768.0 78-79 60912.0 80-81 62183.0 82-83 60117.0 84-85 66544.0 86-87 75342.0 88-89 82493.0 90-91 87068.0 92-93 85232.0 94-95 101067.0 96-97 273528.0 98-99 511412.0 100-101 5505399.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.51401347534024 #Duplication Level Percentage of deduplicated Percentage of total 1 89.27672780618177 75.45134576845928 2 7.504492369656946 12.684695385095502 3 1.778387556639668 4.5089600977866695 4 0.6713653697879967 2.2695912763655812 5 0.30395637247255197 1.2844286479530396 6 0.15316680458120271 0.7766844831810341 7 0.09358826736442742 0.5536664062419675 8 0.05247058544201979 0.35475998120846813 9 0.03706861099822882 0.28195353804748097 >10 0.1259956406230334 1.621383604581175 >50 0.0022187931874212315 0.12880312892198587 >100 5.376568534648063E-4 0.07249457288434938 >500 2.4166211262310687E-5 0.011233109273489644 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2172979005506569E-5 2 0.0 3.6518937016519705E-5 0.0 0.0 1.2172979005506569E-5 3 0.0 3.6518937016519705E-5 0.0 2.4345958011013138E-5 1.2172979005506569E-5 4 0.0 8.521085303854597E-5 0.0 2.4345958011013138E-5 1.2172979005506569E-5 5 0.0 9.738383204405255E-5 0.0 2.4345958011013138E-5 1.2172979005506569E-5 6 2.4345958011013138E-5 9.738383204405255E-5 0.0 2.4345958011013138E-5 2.4345958011013138E-5 7 2.4345958011013138E-5 1.0955681104955912E-4 0.0 2.4345958011013138E-5 2.4345958011013138E-5 8 2.4345958011013138E-5 1.217297900550657E-4 0.0 2.4345958011013138E-5 2.4345958011013138E-5 9 2.4345958011013138E-5 2.1911362209911823E-4 0.0 4.8691916022026276E-5 2.4345958011013138E-5 10-11 6.695138453028613E-5 2.1911362209911823E-4 1.2172979005506569E-5 4.8691916022026276E-5 2.4345958011013138E-5 12-13 7.303787403303941E-5 2.1911362209911823E-4 2.4345958011013138E-5 6.086489502753285E-5 3.6518937016519705E-5 14-15 7.303787403303941E-5 3.8344883867345695E-4 3.6518937016519705E-5 6.086489502753285E-5 7.303787403303941E-5 16-17 7.303787403303941E-5 4.017083071817168E-4 3.6518937016519705E-5 7.303787403303941E-5 7.303787403303941E-5 18-19 7.303787403303941E-5 4.5040022320374303E-4 3.6518937016519705E-5 7.303787403303941E-5 8.521085303854597E-5 20-21 7.303787403303941E-5 5.234380972367824E-4 3.6518937016519705E-5 7.303787403303941E-5 8.521085303854597E-5 22-23 7.303787403303941E-5 6.695138453028613E-4 3.6518937016519705E-5 8.521085303854597E-5 8.521085303854597E-5 24-25 8.521085303854597E-5 7.668976773469139E-4 3.6518937016519705E-5 1.0347032154680583E-4 9.738383204405255E-5 26-27 8.521085303854597E-5 8.642815093909664E-4 3.6518937016519705E-5 1.3390276906057226E-4 9.738383204405255E-5 28-29 8.521085303854597E-5 8.703679988937196E-4 3.6518937016519705E-5 3.6518937016519703E-4 9.738383204405255E-5 30-31 8.521085303854597E-5 0.0010529626839763182 3.6518937016519705E-5 9.068869359102394E-4 1.0347032154680583E-4 32-33 9.738383204405254E-5 0.0010833951314900847 3.6518937016519705E-5 0.0023493849480627675 1.3390276906057226E-4 34-35 1.0955681104955912E-4 0.0012477303480644235 3.6518937016519705E-5 0.004266629141430053 1.3390276906057226E-4 36-37 1.0955681104955912E-4 0.0014485845016552817 3.6518937016519705E-5 0.006865560159105704 1.3390276906057226E-4 38-39 1.0955681104955912E-4 0.0015094493966828146 3.6518937016519705E-5 0.011308697496115603 1.4607574806607882E-4 40-41 1.0955681104955912E-4 0.0016616116342516468 3.6518937016519705E-5 0.015891824091688826 1.5824872707158539E-4 42-43 1.0955681104955912E-4 0.0016981305712681664 3.6518937016519705E-5 0.02037148036571524 1.5824872707158539E-4 44-45 1.0955681104955912E-4 0.0018137738718204787 3.6518937016519705E-5 0.025325882820956415 1.6433521657433867E-4 46-47 1.0955681104955912E-4 0.0019111577038645312 3.6518937016519705E-5 0.031083701890561026 1.7042170607709195E-4 48-49 1.0955681104955912E-4 0.0019111577038645312 3.6518937016519705E-5 0.03628156392591233 1.8259468508259854E-4 50-51 1.0955681104955912E-4 0.0020572334519306104 3.6518937016519705E-5 0.041582896282810436 1.8259468508259854E-4 52-53 1.217297900550657E-4 0.0020815794099416233 3.6518937016519705E-5 0.0470729098142939 1.947676640881051E-4 54-55 1.217297900550657E-4 0.0021302713259636497 4.8691916022026276E-5 0.052282944828650715 2.0694064309361167E-4 56-57 1.217297900550657E-4 0.0021667902629801694 4.8691916022026276E-5 0.05616003864190455 2.1302713259636495E-4 58-59 1.217297900550657E-4 0.0021728767524829226 4.8691916022026276E-5 0.06011625681869419 2.1911362209911823E-4 60-61 1.217297900550657E-4 0.002227655158007702 4.8691916022026276E-5 0.06412116691150585 2.1911362209911823E-4 62-63 1.3390276906057226E-4 0.002252001116018715 4.8691916022026276E-5 0.06835736360542213 2.1911362209911823E-4 64-65 1.3390276906057226E-4 0.0025137201646371066 6.086489502753285E-5 0.07222837092917322 2.1911362209911823E-4 66-67 1.3390276906057226E-4 0.0025806715491673926 6.086489502753285E-5 0.07667150826618313 2.1911362209911823E-4 68-69 1.3390276906057226E-4 0.0026476229336976787 6.086489502753285E-5 0.08090161847059665 2.1911362209911823E-4 70-71 1.3390276906057226E-4 0.0026658824022059383 6.086489502753285E-5 0.08448047429821559 2.617190486183912E-4 72-73 1.3390276906057226E-4 0.0026902283602169516 6.086489502753285E-5 0.08740807574903992 2.678055381211445E-4 74-75 1.3390276906057226E-4 0.002726747297233471 6.086489502753285E-5 0.09013482304627339 2.678055381211445E-4 76-77 1.4607574806607882E-4 0.0028606500662940433 6.086489502753285E-5 0.0923868241622921 2.678055381211445E-4 78-79 1.4607574806607882E-4 0.002982379856349109 6.086489502753285E-5 0.09399365739101898 2.678055381211445E-4 80-81 1.4607574806607882E-4 0.002994552835354616 6.086489502753285E-5 0.09445014410372547 2.738920276238978E-4 82-83 1.4607574806607882E-4 0.003012812303862876 6.086489502753285E-5 0.09477881453687415 2.799785171266511E-4 84-85 1.4607574806607882E-4 0.003061504219884902 6.086489502753285E-5 0.09496749571145949 2.799785171266511E-4 86-87 1.4607574806607882E-4 0.0030919366673986684 6.086489502753285E-5 0.09507705252250906 2.799785171266511E-4 88 1.4607574806607882E-4 0.003359742205519813 6.086489502753285E-5 0.09509531199101731 2.799785171266511E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14125 0.0 51.04165 1 GTATCAA 25430 0.0 37.052155 1 TCAACGC 30760 0.0 30.184708 4 ATCAACG 31150 0.0 29.793 3 CAACGCA 31440 0.0 29.51819 5 TATCAAC 31900 0.0 29.308216 2 AACGCAG 32055 0.0 28.966677 6 GTGGTAT 6795 0.0 28.896679 1 TGGTATC 6555 0.0 28.316021 2 ACGCAGA 36655 0.0 25.357433 7 CGCAGAG 37500 0.0 24.740509 8 GCAGAGT 41905 0.0 21.996252 9 GAGTACT 27020 0.0 21.072071 12-13 GTACATG 26130 0.0 19.912504 1 CAGAGTA 41440 0.0 19.738785 10-11 GTACTTT 29300 0.0 19.312948 14-15 TACATGG 26565 0.0 19.182095 2 ACATGGG 26160 0.0 18.920528 3 AGAGTAC 38745 0.0 18.55528 10-11 CATGGGG 17135 0.0 17.652534 4 >>END_MODULE