##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2140151_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6006972 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 22.032819197425923 18.0 18.0 28.0 18.0 33.0 2 28.495463771097985 29.0 27.0 31.0 25.0 33.0 3 30.376007745666204 31.0 29.0 33.0 27.0 33.0 4 31.36595825650594 33.0 31.0 33.0 29.0 33.0 5 32.315807864594674 33.0 33.0 33.0 31.0 34.0 6 36.03412867581204 38.0 36.0 38.0 33.0 38.0 7 36.21009586860069 38.0 36.0 38.0 33.0 38.0 8 36.043736178560515 38.0 36.0 38.0 33.0 38.0 9 36.85006489126302 38.0 38.0 38.0 35.0 38.0 10-11 36.96136780727461 38.0 38.0 38.0 35.0 38.0 12-13 37.11622145067432 38.0 38.0 38.0 36.0 38.0 14-15 37.02499021137439 38.0 38.0 38.0 35.5 38.0 16-17 37.1194729224641 38.0 38.0 38.0 36.0 38.0 18-19 37.22962450965312 38.0 38.0 38.0 36.0 38.0 20-21 37.285029944451836 38.0 38.0 38.0 36.5 38.0 22-23 37.25985150431998 38.0 38.0 38.0 36.5 38.0 24-25 37.32946353295347 38.0 38.0 38.0 37.0 38.0 26-27 37.31342204365163 38.0 38.0 38.0 37.0 38.0 28-29 37.29029928959724 38.0 38.0 38.0 37.0 38.0 30-31 37.29699964518861 38.0 38.0 38.0 37.0 38.0 32-33 37.28257712869335 38.0 38.0 38.0 37.0 38.0 34-35 37.19580015924136 38.0 38.0 38.0 36.0 38.0 36-37 37.21920407248757 38.0 38.0 38.0 36.5 38.0 38-39 37.20085883282116 38.0 38.0 38.0 36.0 38.0 40-41 37.20577644823051 38.0 38.0 38.0 37.0 38.0 42-43 37.18347961306527 38.0 38.0 38.0 36.0 38.0 44-45 37.144801140916925 38.0 38.0 38.0 36.0 38.0 46-47 37.099052399907514 38.0 38.0 38.0 36.0 38.0 48-49 37.040357889885 38.0 38.0 38.0 36.0 38.0 50-51 36.99359022560512 38.0 38.0 38.0 36.0 38.0 52-53 36.89405248901792 38.0 38.0 38.0 36.0 38.0 54-55 36.921961993981604 38.0 38.0 38.0 36.0 38.0 56-57 36.87715176671135 38.0 38.0 38.0 35.5 38.0 58-59 36.85538992937147 38.0 38.0 38.0 35.0 38.0 60-61 36.85203542276501 38.0 38.0 38.0 35.0 38.0 62-63 36.85673352192447 38.0 38.0 38.0 35.0 38.0 64-65 36.86316322109816 38.0 38.0 38.0 35.0 38.0 66-67 36.86021562897684 38.0 38.0 38.0 35.0 38.0 68-69 36.840678674205165 38.0 38.0 38.0 35.0 38.0 70-71 36.838740493775845 38.0 38.0 38.0 35.0 38.0 72-73 36.84811318819042 38.0 38.0 38.0 35.0 38.0 74-75 36.78170687106026 38.0 38.0 38.0 35.0 38.0 76-77 36.77834504904634 38.0 38.0 38.0 35.0 38.0 78-79 36.77456472663685 38.0 38.0 38.0 35.0 38.0 80-81 36.74879288760498 38.0 38.0 38.0 35.0 38.0 82-83 36.692256357276534 38.0 38.0 38.0 34.0 38.0 84-85 36.683207204392616 38.0 38.0 38.0 34.0 38.0 86-87 36.668393998327815 38.0 38.0 38.0 34.0 38.0 88-89 36.64298761833897 38.0 38.0 38.0 34.0 38.0 90-91 36.65086122105995 38.0 38.0 38.0 34.0 38.0 92-93 36.61914121796788 38.0 38.0 38.0 34.0 38.0 94-95 36.54380100162548 38.0 38.0 38.0 34.0 38.0 96-97 36.55750395496378 38.0 38.0 38.0 34.0 38.0 98-99 36.58069153994039 38.0 38.0 38.0 34.0 38.0 100 34.91699791118323 38.0 34.0 38.0 28.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 8.0 19 9.0 20 35.0 21 126.0 22 483.0 23 1454.0 24 3395.0 25 6778.0 26 12200.0 27 19990.0 28 31429.0 29 45223.0 30 61599.0 31 80540.0 32 106806.0 33 149022.0 34 229356.0 35 428668.0 36 1320299.0 37 3509550.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.48021199366336 17.569234549453537 18.39437573539547 23.556177721487632 2 14.296482035554266 21.109917865878124 41.90476904044768 22.688831058119924 3 18.08540143020477 25.570337268094473 31.508753495105353 24.835507806595402 4 12.523131454583108 18.027518689948945 38.85796371283236 30.591386142635592 5 13.425849163272277 36.99056696119109 35.7180456309768 13.865538244559822 6 29.6500299984751 38.034553848428125 18.776498375554272 13.538917777542494 7 26.253876329038988 32.79197905367297 23.060636873286576 17.893507744001468 8 24.215045450519828 36.88076122212656 21.21822775268471 17.685965574668902 9 25.40985707940706 17.142663558278613 21.216746140984178 36.23073322133015 10-11 24.089915851114338 26.81018822794579 28.944707916068197 20.155188004871672 12-13 25.04650429534215 24.21999802895702 29.118730701591417 21.61476697410942 14-15 22.168540156338334 25.61109823718173 26.82028482902867 25.400076777451268 16-17 21.689912987774875 28.863144359587494 27.409025712122514 22.03791694051512 18-19 21.7300913005754 27.752285177956548 29.350935879175065 21.166687642292988 20-21 22.513061462685716 26.93288713449567 29.24251881818682 21.31153258463179 22-23 22.207001011470126 26.872507899014806 29.166191842028528 21.754299247486536 24-25 22.04960593370469 26.90936841502367 29.312168836462156 21.728856814809486 26-27 21.94417487368103 27.13379320588427 29.22334313334994 21.69868878708476 28-29 21.760140151300305 27.14539423091899 29.269551965097435 21.82491365268327 30-31 22.222182391710867 26.92123420971481 29.240598232420094 21.61598516615423 32-33 22.080702972021182 27.0625352611444 29.202612675929885 21.654149090904536 34-35 21.956349386763215 27.13628556757025 29.255844364294376 21.65152068137216 36-37 22.082794902563112 27.074160541714647 29.17745874234393 21.665585813378303 38-39 21.772340744967632 27.196261990189107 29.282839830345154 21.7485574344981 40-41 22.065146028903648 27.03885279485923 29.14834568283157 21.747655493405553 42-43 22.035545643760273 27.1035533672075 29.015542667941368 21.84535832109086 44-45 21.95706894502075 27.286331081511804 28.932340257641464 21.82425971582598 46-47 22.175732144861822 27.10896229907094 28.5712448608837 22.144060695183544 48-49 22.059185660416382 27.274013886345095 28.568074726518923 22.098725726719604 50-51 21.971604651567482 27.484358902491262 28.519387169843586 22.02464927609767 52-53 22.167031358712055 27.412280643227987 28.44346196878905 21.97722602927091 54-55 22.10132962544538 27.327570219471966 28.426220167195403 22.144879987887247 56-57 22.15737566955498 27.489706100128945 28.28183975468011 22.071078475635964 58-59 21.971821616997396 27.51272636333252 28.394907019260252 22.120545000409837 60-61 22.25218801288698 27.560886063815854 28.40030117418419 21.786624749112978 62-63 21.880439747643205 27.718752152843173 28.364612021577724 22.036196077935895 64-65 21.804858936574398 27.642775284761946 28.440167325572407 22.112198453091246 66-67 21.90220791940359 27.673241294920732 28.5160913280276 21.908459457648082 68-69 21.92285087708071 27.797316285957297 28.410985037563712 21.868847799398285 70-71 21.97266798714081 27.36172448581155 28.24554953378624 22.420057993261402 72-73 22.050357513488912 27.33662452593003 28.29061056908545 22.322407391495602 74-75 21.905370058917402 27.58902033348336 28.390673555679037 22.114936051920203 76-77 22.107826768595356 27.291648904929712 28.215377638209997 22.38514668826494 78-79 22.122573057312188 27.360373152170915 27.923137126865022 22.59391666365188 80-81 22.324297348494763 27.54117185986403 27.881003084138538 22.25352770750267 82-83 22.350372548608583 27.3525735882971 27.943363982361564 22.35368988073275 84-85 22.302403129452454 27.29448303330385 27.887121345283216 22.51599249196048 86-87 22.0647418419209 27.588131236278034 27.943680900063338 22.40344602173773 88-89 22.424536040901923 27.637659817681776 27.839662744397764 22.09814139701854 90-91 22.497435763790673 27.593808881823513 27.857086709851348 22.051668644534463 92-93 22.280705626098214 27.38795229976832 27.783261638431867 22.548080435701596 94-95 22.38940774924425 27.694918347498948 27.775126218209188 22.14054768504761 96-97 22.637149135125313 27.5397578020453 27.96467808818913 21.858414974640255 98-99 23.311297512308006 29.657637904404787 28.250931889625015 18.780132693662193 100 22.249445870659574 30.48489231090431 22.23700519822476 25.028656620211354 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1483.0 1 1367.5 2 1592.5 3 2061.0 4 2582.0 5 3500.0 6 4387.0 7 6113.0 8 7814.0 9 8288.0 10 8177.5 11 8027.0 12 8859.0 13 11107.5 14 15481.0 15 20670.0 16 24393.0 17 26198.5 18 25902.0 19 23837.0 20 21261.5 21 19341.5 22 19376.5 23 22011.0 24 27337.0 25 35756.0 26 47359.0 27 60169.5 28 71588.5 29 83631.0 30 95661.5 31 107780.5 32 122045.0 33 136489.5 34 151717.5 35 166164.5 36 181695.0 37 195412.0 38 203933.5 39 212045.5 40 222593.0 41 231589.0 42 237252.0 43 243784.0 44 247738.0 45 251635.0 46 259668.0 47 264560.5 48 262517.5 49 255870.5 50 246666.0 51 236858.0 52 225876.0 53 213050.5 54 199187.0 55 183559.5 56 167113.0 57 151005.0 58 134649.0 59 117191.0 60 98254.0 61 79584.0 62 62321.0 63 47704.0 64 35843.5 65 26385.5 66 19390.5 67 14576.0 68 10845.5 69 7627.5 70 5414.5 71 3962.0 72 2798.5 73 1837.0 74 1144.0 75 719.0 76 476.5 77 305.5 78 189.5 79 113.0 80 71.0 81 41.0 82 28.5 83 22.0 84 16.0 85 11.0 86 8.0 87 5.0 88 1.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.015681777774226347 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 5.161396021096457E-4 26-27 3.996365971210179E-4 28-29 0.003914408379232548 30-31 0.006293750947188677 32-33 0.004534936044874319 34-35 0.0020010603107855976 36-37 0.0 38-39 0.0 40-41 4.249393505311955E-4 42-43 0.0 44-45 2.5843392658564073E-5 46-47 4.6051552888774815E-4 48-49 0.0015247931363978288 50-51 0.0026587855904067485 52-53 0.0 54-55 0.0027503792522139883 56-57 0.03812706566737168 58-59 0.060938883839407605 60-61 0.04167212939095607 62-63 0.013969913877094634 64-65 4.463880095716749E-4 66-67 0.0 68-69 9.480876503240374E-6 70-71 0.002817732932589094 72-73 0.0051047915879234 74-75 0.0039786334674631356 76-77 0.0033154143083808938 78-79 0.007852784604396543 80-81 0.016028345202228986 82-83 0.04188666148864259 84-85 0.0188168958880255 86-87 0.0019293100787158512 88-89 0.0011527321953700826 90-91 1.271257814262877E-4 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 43.0 20-21 221.0 22-23 479.0 24-25 538.0 26-27 1465.0 28-29 3835.0 30-31 10432.0 32-33 13923.0 34-35 19211.0 36-37 30270.0 38-39 34706.0 40-41 35127.0 42-43 40676.0 44-45 48890.0 46-47 49751.0 48-49 46242.0 50-51 41128.0 52-53 38843.0 54-55 41480.0 56-57 43232.0 58-59 25429.0 60-61 47257.0 62-63 45607.0 64-65 48869.0 66-67 52213.0 68-69 54458.0 70-71 58751.0 72-73 47556.0 74-75 47058.0 76-77 49260.0 78-79 50857.0 80-81 51225.0 82-83 48304.0 84-85 47321.0 86-87 48556.0 88-89 50885.0 90-91 52771.0 92-93 52456.0 94-95 60946.0 96-97 208840.0 98-99 411129.0 100-101 3946732.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 86.73403918431889 #Duplication Level Percentage of deduplicated Percentage of total 1 91.00329076501538 78.93082987114809 2 6.399228708546019 11.100619071128977 3 1.4443735379549165 3.7582905311332517 4 0.5276643355050088 1.8306583660743607 5 0.23838814251524384 1.033818324699708 6 0.12228863772297992 0.6363952497637151 7 0.0755148277314798 0.4584794219221482 8 0.05115471443766003 0.3549484005198919 9 0.030178835658721096 0.23557790831045727 >10 0.10572045753500017 1.3571322772257606 >50 0.0014214978269903686 0.0841098622457065 >100 6.590581670438063E-4 0.11151956932957369 >500 2.9120354898828247E-5 0.014371380956252016 >1k 8.73610286434189E-5 0.09324976554214559 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 1.664732247794729E-5 0.0 0.0 0.0 3 0.0 1.664732247794729E-5 0.0 0.0 0.0 4 0.0 1.664732247794729E-5 0.0 1.664732247794729E-5 1.664732247794729E-5 5 0.0 1.664732247794729E-5 0.0 3.329464495589458E-5 1.664732247794729E-5 6 0.0 1.664732247794729E-5 0.0 3.329464495589458E-5 3.329464495589458E-5 7 0.0 1.664732247794729E-5 0.0 3.329464495589458E-5 4.994196743384187E-5 8 0.0 1.664732247794729E-5 0.0 3.329464495589458E-5 4.994196743384187E-5 9 0.0 1.664732247794729E-5 0.0 4.994196743384187E-5 9.988393486768375E-5 10-11 0.0 1.664732247794729E-5 0.0 7.491295115076281E-5 1.0820759610665739E-4 12-13 0.0 1.664732247794729E-5 0.0 9.988393486768375E-5 1.2485491858460468E-4 14-15 0.0 9.15602736287101E-5 0.0 9.988393486768375E-5 1.4982590230152562E-4 16-17 0.0 9.988393486768375E-5 0.0 1.0820759610665739E-4 1.664732247794729E-4 18-19 0.0 1.3317857982357833E-4 0.0 1.4150224106255197E-4 1.9144420849639385E-4 20-21 0.0 1.4982590230152562E-4 0.0 1.5814956354049927E-4 1.997678697353675E-4 22-23 0.0 1.5814956354049927E-4 0.0 2.1641519221331478E-4 2.0809153097434114E-4 24-25 0.0 1.9144420849639385E-4 0.0 2.1641519221331478E-4 2.1641519221331478E-4 26-27 0.0 2.1641519221331478E-4 0.0 2.4970983716920937E-4 2.1641519221331478E-4 28-29 0.0 2.1641519221331478E-4 0.0 5.660089642502079E-4 2.1641519221331478E-4 30-31 0.0 2.3306251469126208E-4 0.0 0.0016314376028388345 2.2473885345228843E-4 32-33 0.0 2.3306251469126208E-4 0.0 0.0037706185412550615 2.4970983716920937E-4 34-35 0.0 2.8300448212510395E-4 0.0 0.006783783909763521 2.4970983716920937E-4 36-37 0.0 3.1629912708099853E-4 0.0 0.011594860105890288 2.4970983716920937E-4 38-39 0.0 3.1629912708099853E-4 0.0 0.026544155691086955 2.4970983716920937E-4 40-41 0.0 3.662410945148404E-4 0.0 0.04269205849469583 2.4970983716920937E-4 42-43 0.0 3.662410945148404E-4 0.0 0.051922998808717605 2.4970983716920937E-4 44-45 0.0 4.0785940070970863E-4 0.0 0.0633597093510674 2.4970983716920937E-4 46-47 0.0 4.4947770690457686E-4 0.0 0.07496289311819665 2.6635715964715666E-4 48-49 0.0 4.578013681435505E-4 0.0 0.08666596082019361 2.8300448212510395E-4 50-51 0.0 6.076272704450762E-4 0.0 0.09876024060042231 2.8300448212510395E-4 52-53 0.0 6.159509316840498E-4 0.0 0.13699914033226723 2.8300448212510395E-4 54-55 0.0 6.159509316840498E-4 0.0 0.18585070814380356 2.8300448212510395E-4 56-57 0.0 6.325982541619971E-4 0.0 0.24558130119467847 2.913281433640776E-4 58-59 0.0 6.492455766399444E-4 0.0 0.45465502419521847 2.9965180460305124E-4 60-61 0.0 6.575692378789179E-4 0.0 0.6382084018370653 3.079754658420249E-4 62-63 0.0 6.658928991178916E-4 0.0 0.6456747259684248 3.329464495589458E-4 64-65 0.0 7.158348665517335E-4 0.0 0.6521422107511072 3.329464495589458E-4 66-67 0.0 7.158348665517335E-4 0.0 0.6583266910516646 3.329464495589458E-4 68-69 0.0 7.491295115076281E-4 0.0 0.6639618097104498 3.329464495589458E-4 70-71 0.0 7.741004952245491E-4 0.0 0.6689143881476391 3.329464495589458E-4 72-73 0.0 7.824241564635227E-4 0.0 0.6722105579982727 3.495937720368931E-4 74-75 0.0 7.9907147894147E-4 0.0 0.6754567858814724 3.495937720368931E-4 76-77 0.0 8.323661238973646E-4 0.0 0.6785781588460875 3.495937720368931E-4 78-79 0.0 8.490134463753118E-4 0.0 0.6805258955760074 3.495937720368931E-4 80-81 0.0 8.490134463753118E-4 0.0 0.681283348748754 3.495937720368931E-4 82-83 0.0 8.490134463753118E-4 0.0 0.681874328696721 3.495937720368931E-4 84-85 0.0 8.573371076142854E-4 0.0 0.682173980501324 3.495937720368931E-4 86-87 0.0 8.656607688532591E-4 0.0 0.6823404537261036 3.495937720368931E-4 88 0.0 9.15602736287101E-4 0.0 0.6823404537261036 3.495937720368931E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7760 0.0 50.298145 1 GTATCAA 14540 0.0 37.599457 1 TCAACGC 18310 0.0 30.367775 4 ATCAACG 18265 0.0 30.325325 3 CAACGCA 18740 0.0 29.62525 5 TATCAAC 18920 0.0 29.438625 2 AACGCAG 19295 0.0 28.817514 6 GTGGTAT 3960 0.0 25.317219 1 ACGCAGA 21930 0.0 25.296345 7 TGGTATC 3645 0.0 24.919172 2 CGCAGAG 22285 0.0 24.912596 8 GCAGAGT 26005 0.0 21.250025 9 GAGTACT 15660 0.0 20.010096 12-13 AGAGTAC 23680 0.0 19.12141 10-11 CAGAGTA 25195 0.0 18.84725 10-11 TACATGG 16945 0.0 18.558796 2 GTACATG 17420 0.0 18.495455 1 GTACTTT 17285 0.0 18.14175 14-15 ACATGGG 17390 0.0 17.514456 3 CGAGACC 7455 0.0 17.398964 86-87 >>END_MODULE