##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2140097_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6681419 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.72991381022504 34.0 31.0 34.0 31.0 34.0 2 32.941168934323684 34.0 31.0 34.0 31.0 34.0 3 33.05379201633665 34.0 33.0 34.0 31.0 34.0 4 36.43971348002572 37.0 37.0 37.0 35.0 37.0 5 36.29698646350423 37.0 37.0 37.0 35.0 37.0 6 36.31890022164453 37.0 37.0 37.0 35.0 37.0 7 36.3287957243813 37.0 37.0 37.0 35.0 37.0 8 36.3370435232396 37.0 37.0 37.0 35.0 37.0 9 38.25441706320169 39.0 39.0 39.0 37.0 39.0 10-11 38.15569956022815 39.0 38.5 39.0 37.0 39.0 12-13 38.14293767536507 39.0 39.0 39.0 37.0 39.0 14-15 39.63484889961249 41.0 39.5 41.0 37.0 41.0 16-17 39.61241339601662 41.0 39.0 41.0 37.0 41.0 18-19 39.657695992423164 41.0 40.0 41.0 37.5 41.0 20-21 39.677983868773126 41.0 40.0 41.0 37.5 41.0 22-23 39.62945980279328 41.0 40.0 41.0 37.0 41.0 24-25 39.61256467669799 41.0 39.5 41.0 37.0 41.0 26-27 39.49633047569887 41.0 39.0 41.0 37.0 41.0 28-29 39.42697166547802 40.5 39.0 41.0 37.0 41.0 30-31 39.36640940912288 40.0 39.0 41.0 36.5 41.0 32-33 39.28023854987386 40.0 39.0 41.0 36.0 41.0 34-35 39.24668733585371 40.0 39.0 41.0 36.0 41.0 36-37 39.21001492777195 40.0 39.0 41.0 36.0 41.0 38-39 39.13418846515816 40.0 39.0 41.0 35.0 41.0 40-41 39.09752772979605 40.0 39.0 41.0 35.0 41.0 42-43 39.10160308155584 40.0 39.0 41.0 35.0 41.0 44-45 39.046337943369416 40.0 39.0 41.0 35.0 41.0 46-47 38.948551424701094 40.0 38.5 41.0 35.0 41.0 48-49 38.946460087883764 40.0 38.5 41.0 35.0 41.0 50-51 38.832300175539224 40.0 38.0 41.0 35.0 41.0 52-53 38.68564648214432 40.0 38.0 41.0 35.0 41.0 54-55 38.48848849204819 40.0 38.0 41.0 34.5 41.0 56-57 38.35549629475072 40.0 37.0 41.0 34.0 41.0 58-59 38.21923847967222 40.0 37.0 41.0 34.0 41.0 60-61 38.00583957600212 40.0 36.5 41.0 34.0 41.0 62-63 37.872791052987765 39.0 36.0 41.0 34.0 41.0 64-65 37.64259365683884 39.0 36.0 41.0 33.5 41.0 66-67 37.43947862060013 39.0 35.0 40.5 33.0 41.0 68-69 37.20783580332824 38.5 35.0 40.0 33.0 41.0 70-71 36.78449269400845 37.0 35.0 40.0 33.0 41.0 72-73 36.52966263722094 37.0 35.0 39.5 33.0 41.0 74-75 36.1700916976688 36.5 35.0 39.0 32.5 41.0 76-77 34.34980472262901 34.5 33.0 36.5 30.0 39.0 78-79 35.34377642962575 35.0 34.0 37.0 32.0 39.0 80-81 35.25670153528381 35.0 35.0 37.0 32.0 39.0 82-83 34.96761986759458 35.0 34.5 37.0 32.0 39.0 84-85 34.702046516363566 35.0 34.0 36.0 32.0 37.5 86-87 34.4936934424217 35.0 34.0 36.0 32.0 37.0 88-89 34.31141136177234 35.0 34.0 36.0 32.0 37.0 90-91 34.22804156739661 35.0 34.0 35.0 32.0 36.0 92-93 34.09640701399238 35.0 34.0 35.0 31.5 36.0 94-95 33.94096089012632 35.0 34.0 35.0 31.0 36.0 96-97 33.95865166069136 35.0 34.0 35.0 31.0 36.0 98-99 33.98175506007311 35.0 34.0 35.0 31.0 35.5 100-101 32.78363980219855 34.5 32.0 35.0 28.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 13.0 20 22.0 21 63.0 22 322.0 23 853.0 24 2392.0 25 5229.0 26 9922.0 27 16217.0 28 25036.0 29 35843.0 30 49203.0 31 66112.0 32 90183.0 33 128343.0 34 206386.0 35 341632.0 36 698764.0 37 1545832.0 38 2243475.0 39 1189255.0 40 26320.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.71470162251462 20.581211865323816 13.139439391542426 24.56464712061914 2 14.552949239320956 21.308217985842045 41.48824792896866 22.650584845868334 3 17.881093743943055 26.83590413419022 30.784563849898696 24.498438271968027 4 11.750363208773464 18.24657307078032 39.67723024106107 30.325833479385146 5 12.513240076696283 38.40372830980964 36.37689838041889 12.706133233075189 6 29.03821443939309 38.89166526351238 19.14179341827094 12.928326878823595 7 25.74388763823972 32.81145816480002 23.748024184682926 17.696630012277332 8 24.274559042023856 36.75999065467979 21.888643714755805 17.076806588540546 9 25.470079995019017 16.12590804104998 21.342586661270605 37.061425302660396 10-11 23.90320777614946 26.79388742292133 29.440785990430605 19.8621188104986 12-13 24.77630780776039 24.24036402000721 29.35047507322951 21.632853099002887 14-15 21.82045460702285 25.805214431245815 26.72911248344102 25.645218478290317 16-17 21.573905183913777 28.88602705503127 27.3839733745182 22.15609438653675 18-19 21.378804412655455 28.197962139479653 28.94857364880125 21.47465979906364 20-21 22.253055071360084 27.410387916157404 28.744410049353515 21.592146963129004 22-23 21.899302927214727 27.76275096543735 28.426668299242095 21.91127780810583 24-25 21.817247499301985 27.743873729627445 28.75379418186772 21.68508458920285 26-27 21.9543102358705 27.96534062762627 28.52380868234904 21.556540454154195 28-29 21.35980280819686 28.008087645330498 28.610427499672557 22.021682046800084 30-31 22.021421074564028 27.66180006962041 28.8074438733329 21.509334982482667 32-33 21.60877957616104 28.121882188594682 28.54687798789279 21.722460247351485 34-35 21.53507065796391 28.24638996759153 28.897274167661347 21.321265206783213 36-37 21.967052285776298 27.9941383075508 28.44834111562799 21.59046829104491 38-39 21.60222128268081 27.831414127633618 28.728846786787553 21.837517802898013 40-41 21.727940038578943 27.713959186560995 28.79716997780474 21.760930797055327 42-43 21.95755249315034 27.67352207251547 28.622693530285837 21.74623190404835 44-45 21.74116091245591 28.24930697924792 28.33714987741487 21.672382230881304 46-47 21.999492292263454 27.762184101448945 27.91653014719666 22.321793459090944 48-49 21.989554131243985 27.7512298889491 28.1021681955622 22.157047784244714 50-51 21.701962037212912 27.94391807740057 28.17025874837099 22.183861137015523 52-53 21.77099846483541 28.03839598095147 28.24716199952474 21.94344355468838 54-55 21.76994333384405 28.127838198784772 27.933373385203016 22.168845082168165 56-57 22.23927239789044 28.23285467749721 27.556108358236013 21.971764566376333 58-59 21.785579071537263 28.508009521660664 28.07158558873643 21.634825818065636 60-61 22.08315415271586 28.785097205558476 27.41481086111471 21.71693778061096 62-63 21.872939731125488 28.81186489352401 27.366769316736423 21.948426058614082 64-65 21.803615423566786 28.627669502782755 27.60293466487735 21.965780408773114 66-67 21.95063496179602 28.445048620856944 27.501090626369624 22.10322579097741 68-69 21.998927525934985 28.27080232451821 27.68491371492725 22.045356434619553 70-71 21.95231208007986 27.939691652955457 27.738744935581 22.369251331383683 72-73 22.05942802830508 28.094145864942465 27.899890018043827 21.94653608870863 74-75 21.94804883004757 28.200180084272258 27.783864519475003 22.067906566205174 76-77 21.870467441825276 28.16443575927145 27.63982467606378 22.32527212283949 78-79 22.037650283291256 28.1345516705093 27.63949611182422 22.188301934375218 80-81 21.862645498686188 28.214768078520592 27.684697570551688 22.237888852241536 82-83 22.08119900407596 28.07807621938388 27.844187155814907 21.996537620725253 84-85 22.41523945528378 27.97495352778879 27.636879694278942 21.972927322648488 86-87 21.84055211178262 28.168755191630808 27.775187704352554 22.21550499223402 88-89 22.1267731550789 28.021318184975673 27.73642623294213 22.11548242700329 90-91 22.232060339872568 27.98491328480008 27.727047595087974 22.055978780239382 92-93 22.1947290481116 28.04885924163075 27.68645605613105 22.0699556541266 94-95 21.925180309506086 28.151368971821633 27.858806922919637 22.064643795752644 96-97 21.918660495356416 28.21745817407455 27.817882718688885 22.04599861188015 98-99 22.21117523847413 28.768850034035363 27.816778122345088 21.203196605145422 100-101 26.202310740185702 35.69355170585517 28.496031778887243 9.608105775071888 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 761.0 1 796.0 2 1520.0 3 2363.0 4 3526.0 5 6229.0 6 8289.0 7 9207.0 8 9239.5 9 8229.5 10 7034.0 11 6166.5 12 6821.5 13 9538.5 14 15823.0 15 23920.5 16 29985.0 17 33339.0 18 34020.5 19 32630.0 20 30428.0 21 28446.5 22 28552.0 23 32332.0 24 39149.5 25 49433.0 26 63000.5 27 77220.5 28 92724.5 29 110809.0 30 127158.0 31 140880.5 32 156551.5 33 173424.0 34 191135.5 35 209065.5 36 226000.0 37 241580.5 38 251097.0 39 256911.5 40 265009.0 41 270787.5 42 272949.5 43 277585.0 44 285041.0 45 296791.5 46 310438.0 47 321903.5 48 321308.5 49 311117.5 50 302592.5 51 290348.5 52 271760.5 53 253452.5 54 235466.0 55 213861.0 56 192589.0 57 168137.5 58 142471.5 59 121757.5 60 101622.5 61 81129.5 62 63023.0 63 48248.0 64 35772.0 65 25978.0 66 19333.0 67 14729.0 68 11332.5 69 8477.5 70 6452.0 71 4696.0 72 3331.5 73 2451.5 74 1767.0 75 1257.0 76 896.0 77 608.5 78 422.0 79 291.0 80 189.0 81 121.5 82 82.0 83 54.5 84 35.0 85 26.0 86 25.0 87 18.0 88 11.0 89 6.0 90 2.0 91 1.5 92 2.0 93 1.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0012871517263024516 3 5.687414604592228E-4 4 0.0 5 0.0 6 6.585427436896264E-4 7 0.0 8 0.0 9 4.49006416152018E-5 10-11 2.1701976780680868E-4 12-13 4.190726550752168E-4 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 5.9900541141488674E-5 28-29 0.0 30-31 5.254934120392343E-5 32-33 3.0879111742015714E-4 34-35 7.562172019146815E-5 36-37 7.455245514547732E-4 38-39 2.3799839358761696E-4 40-41 7.757049820195463E-5 42-43 0.0 44-45 7.930205940311085E-6 46-47 0.0 48-49 3.2586303194695996E-5 50-51 0.0 52-53 0.0 54-55 7.098747721745654E-4 56-57 1.0281502394818946E-4 58-59 8.69145231299971E-6 60-61 8.290158364954996E-4 62-63 0.0 64-65 0.0 66-67 3.690001157737863E-5 68-69 0.0 70-71 0.0 72-73 7.708559410927307E-5 74-75 0.0 76-77 1.9777982260138814E-5 78-79 5.011695794475568E-5 80-81 0.0 82-83 0.0 84-85 4.182915550699656E-5 86-87 6.466307938516648E-4 88-89 9.677757556043625E-5 90-91 2.1838214210606427E-5 92-93 2.2191794805788508E-5 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 150.0 20-21 465.0 22-23 857.0 24-25 1592.0 26-27 3625.0 28-29 9434.0 30-31 20745.0 32-33 25051.0 34-35 34521.0 36-37 54935.0 38-39 68474.0 40-41 64845.0 42-43 71549.0 44-45 83244.0 46-47 83962.0 48-49 79879.0 50-51 72307.0 52-53 70361.0 54-55 78759.0 56-57 83340.0 58-59 82617.0 60-61 83508.0 62-63 82131.0 64-65 82311.0 66-67 86202.0 68-69 77255.0 70-71 73457.0 72-73 66568.0 74-75 66658.0 76-77 66899.0 78-79 70247.0 80-81 71589.0 82-83 66557.0 84-85 64299.0 86-87 66063.0 88-89 69771.0 90-91 72818.0 92-93 72635.0 94-95 76003.0 96-97 112984.0 98-99 492485.0 100-101 3770267.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 82.85280366411979 #Duplication Level Percentage of deduplicated Percentage of total 1 88.6674958317742 73.46350623539149 2 7.3667118656768515 12.207054637141315 3 2.126607656838812 5.285862199880398 4 0.836149149131681 2.7710920514771193 5 0.4053041695937073 1.679029339379827 6 0.215674686067716 1.0721551452053488 7 0.12620525231937502 0.7319521294258513 8 0.07535779949796116 0.49948839730917455 9 0.04716773595352372 0.35171812496145105 >10 0.13033399343387514 1.5305660663241945 >50 0.0018846115271738022 0.10726923036753076 >100 8.342232213637493E-4 0.1456047510944143 >500 2.4268887176084154E-4 0.12700369041935053 >1k 3.033609199834973E-5 0.027698001622520924 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 1.49668805384006E-5 0.0 6 0.0 0.0 0.0 1.49668805384006E-5 1.49668805384006E-5 7 0.0 0.0 0.0 5.98675221536024E-5 1.49668805384006E-5 8 0.0 0.0 0.0 5.98675221536024E-5 2.99337610768012E-5 9 0.0 0.0 0.0 1.49668805384006E-4 4.49006416152018E-5 10-11 0.0 0.0 0.0 1.796025664608072E-4 4.49006416152018E-5 12-13 0.0 1.49668805384006E-5 0.0 2.0953632753760838E-4 5.98675221536024E-5 14-15 0.0 1.49668805384006E-5 0.0 2.544369691528102E-4 9.72847234996039E-5 16-17 0.0 1.49668805384006E-5 0.0 2.918541704988117E-4 1.197350443072048E-4 18-19 0.0 1.49668805384006E-5 0.0 3.442382523832138E-4 1.197350443072048E-4 20-21 0.0 1.49668805384006E-5 0.0 3.666885731908147E-4 1.197350443072048E-4 22-23 0.0 1.49668805384006E-5 0.0 4.041057745368162E-4 1.49668805384006E-4 24-25 0.0 1.49668805384006E-5 0.0 4.7894017722881926E-4 1.870860067300075E-4 26-27 0.0 1.49668805384006E-5 0.0 6.73509624228027E-4 2.095363275376084E-4 28-29 0.0 1.49668805384006E-5 0.0 0.0011823835625336474 2.095363275376084E-4 30-31 0.0 1.49668805384006E-5 0.0 0.0027988066606809124 2.170197678068087E-4 32-33 0.0 1.49668805384006E-5 0.0 0.005462911396516219 2.24503208076009E-4 34-35 0.0 1.49668805384006E-5 0.0 0.008673307272003147 2.24503208076009E-4 36-37 0.0 1.49668805384006E-5 0.0 0.013462709044291341 2.24503208076009E-4 38-39 0.0 1.49668805384006E-5 0.0 0.02065429514299283 2.319866483452093E-4 40-41 0.0 1.49668805384006E-5 0.0 0.028294887657846334 2.394700886144096E-4 42-43 0.0 1.49668805384006E-5 0.0 0.035149718944433805 2.394700886144096E-4 44-45 0.0 1.49668805384006E-5 0.0 0.042610708892826504 2.394700886144096E-4 46-47 0.0 1.49668805384006E-5 0.0 0.05103706263594605 2.394700886144096E-4 48-49 0.0 1.49668805384006E-5 0.0 0.06019679352544721 2.394700886144096E-4 50-51 0.0 1.49668805384006E-5 0.0 0.06868301479072036 2.469535288836099E-4 52-53 0.0 1.49668805384006E-5 0.0 0.07682499780361028 2.99337610768012E-4 54-55 0.0 1.49668805384006E-5 0.0 0.08506426553999981 3.442382523832138E-4 56-57 0.0 1.49668805384006E-5 0.0 0.09315386447100533 3.442382523832138E-4 58-59 0.0 1.49668805384006E-5 0.0 0.10109379459662685 3.442382523832138E-4 60-61 0.0 1.49668805384006E-5 0.0 0.10867451958932675 3.442382523832138E-4 62-63 0.0 1.49668805384006E-5 0.0 0.11677908540087069 3.74172013460015E-4 64-65 0.0 1.49668805384006E-5 0.0 0.12385093645526497 3.74172013460015E-4 66-67 0.0 1.49668805384006E-5 0.0 0.13083298622642886 3.816554537292153E-4 68-69 0.0 1.49668805384006E-5 0.0 0.13825655897347555 3.966223342676159E-4 70-71 0.0 1.49668805384006E-5 0.0 0.14533589346813902 4.0410577453681623E-4 72-73 0.0 1.49668805384006E-5 0.0 0.15115800999757686 4.789401772288192E-4 74-75 0.0 1.49668805384006E-5 0.0 0.15576780920340424 4.8642361749801956E-4 76-77 0.0 1.49668805384006E-5 0.0 0.159943568873618 5.013904980364202E-4 78-79 0.0 1.49668805384006E-5 0.0 0.16389482533575578 5.088739383056204E-4 80-81 0.0 1.49668805384006E-5 0.0 0.16544389747148025 5.088739383056204E-4 82-83 0.0 1.49668805384006E-5 0.0 0.16605005613328547 5.537745799208222E-4 84-85 0.0 1.49668805384006E-5 0.0 0.1665439631910527 5.537745799208222E-4 86-87 0.0 1.49668805384006E-5 0.0 0.1668133670407439 5.537745799208222E-4 88-89 0.0 1.49668805384006E-5 0.0 0.1668807180031667 5.837083409976234E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8370 0.0 37.12535 1 CTTATAC 7425 0.0 35.72998 1 GTATCAA 13690 0.0 31.819431 1 TATACAC 9395 0.0 31.24425 3 ATCAACG 15590 0.0 26.969448 3 TTATACA 10345 0.0 26.713297 2 CAACGCA 15945 0.0 26.317055 5 TCAACGC 16165 0.0 26.136171 4 AACGCAG 16550 0.0 25.775724 6 TATCAAC 17295 0.0 24.855524 2 ACACATC 11325 0.0 23.75026 6 ACGCAGA 18380 0.0 22.741282 7 CGCAGAG 18420 0.0 22.6919 8 TACACAT 13130 0.0 22.418272 5 ACATCTC 12125 0.0 22.35172 8 TACATGG 19525 0.0 21.45057 2 GTACATG 20080 0.0 21.163519 1 CACATCT 13075 0.0 20.696384 7 ACATGGG 19705 0.0 20.402472 3 ATACACA 16390 0.0 19.907528 4 >>END_MODULE