##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2140095_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6698930 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.80251861118119 34.0 31.0 34.0 31.0 34.0 2 33.002340373761186 34.0 33.0 34.0 31.0 34.0 3 33.112238670951925 34.0 33.0 34.0 31.0 34.0 4 36.47355965803494 37.0 37.0 37.0 35.0 37.0 5 36.3411653801428 37.0 37.0 37.0 35.0 37.0 6 36.36848436989191 37.0 37.0 37.0 35.0 37.0 7 36.37596153415546 37.0 37.0 37.0 35.0 37.0 8 36.38746949139639 37.0 37.0 37.0 35.0 37.0 9 38.29928510971155 39.0 39.0 39.0 37.0 39.0 10-11 38.21138062347271 39.0 39.0 39.0 37.0 39.0 12-13 38.19317308883657 39.0 39.0 39.0 37.0 39.0 14-15 39.71894078606583 41.0 40.0 41.0 38.0 41.0 16-17 39.700857674285295 41.0 40.0 41.0 38.0 41.0 18-19 39.73794650787514 41.0 40.0 41.0 38.0 41.0 20-21 39.757718128492684 41.0 40.0 41.0 38.0 41.0 22-23 39.71190653064213 41.0 40.0 41.0 38.0 41.0 24-25 39.69593991216239 41.0 40.0 41.0 37.0 41.0 26-27 39.58879860152861 41.0 40.0 41.0 37.0 41.0 28-29 39.52838890093969 41.0 39.0 41.0 37.0 41.0 30-31 39.47048234665506 40.5 39.0 41.0 37.0 41.0 32-33 39.39370717578569 40.0 39.0 41.0 36.5 41.0 34-35 39.36140249432987 40.0 39.0 41.0 36.0 41.0 36-37 39.328125431997975 40.0 39.0 41.0 36.0 41.0 38-39 39.27073696720653 40.0 39.0 41.0 36.0 41.0 40-41 39.21175236400873 40.0 39.0 41.0 36.0 41.0 42-43 39.208824922846034 40.0 39.0 41.0 35.0 41.0 44-45 39.15667121865181 40.0 39.0 41.0 35.0 41.0 46-47 39.05398382768946 40.0 39.0 41.0 35.0 41.0 48-49 39.05439574206504 40.0 39.0 41.0 35.0 41.0 50-51 38.95742574124486 40.0 38.5 41.0 35.0 41.0 52-53 38.80864691717329 40.0 38.0 41.0 35.0 41.0 54-55 38.623896332025204 40.0 38.0 41.0 35.0 41.0 56-57 38.49280086500101 40.0 38.0 41.0 35.0 41.0 58-59 38.35151237553219 40.0 37.0 41.0 34.0 41.0 60-61 38.14299363353848 40.0 37.0 41.0 34.0 41.0 62-63 38.00157130487793 39.5 36.0 41.0 34.0 41.0 64-65 37.75074530752041 39.0 36.0 41.0 34.0 41.0 66-67 37.52721685635191 39.0 35.0 40.5 34.0 41.0 68-69 37.279877076400716 38.5 35.0 40.0 33.5 41.0 70-71 36.840435037105664 37.5 35.0 40.0 33.0 41.0 72-73 36.5819652626663 37.0 35.0 39.5 33.0 41.0 74-75 36.21918036364319 36.5 35.0 39.0 32.5 41.0 76-77 34.40050956561977 34.5 33.0 37.0 30.0 39.0 78-79 35.39611491841585 35.0 34.5 37.5 32.0 39.0 80-81 35.30008362230636 35.0 35.0 37.0 32.0 39.0 82-83 35.00730196876087 35.0 34.5 37.0 32.0 39.0 84-85 34.74144080926953 35.0 34.0 36.0 32.0 37.5 86-87 34.53492125411252 35.0 34.0 36.0 32.0 37.0 88-89 34.34966570420991 35.0 34.0 36.0 32.0 37.0 90-91 34.26620958246964 35.0 34.0 35.0 32.0 36.0 92-93 34.133204965356185 35.0 34.0 35.0 32.0 36.0 94-95 33.97215987659646 35.0 34.0 35.0 31.0 36.0 96-97 33.99261433408408 35.0 34.0 35.0 31.5 36.0 98-99 34.01581485804367 35.0 34.0 35.0 32.0 35.5 100-101 32.801161978027764 34.5 32.0 35.0 28.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 3.0 19 15.0 20 30.0 21 70.0 22 247.0 23 760.0 24 2267.0 25 4816.0 26 9104.0 27 15311.0 28 23041.0 29 33369.0 30 45369.0 31 61743.0 32 83947.0 33 118972.0 34 190065.0 35 318442.0 36 663141.0 37 1519218.0 38 2292429.0 39 1282110.0 40 34460.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.29491874075412 20.29854021463129 13.020318170215242 24.386222874399344 2 14.728092223126033 21.29683882046284 41.16812317196655 22.80694578444458 3 18.221317263009247 26.439798235230015 30.310693264107936 25.028191237652802 4 12.072942992388338 17.739773366791415 39.844960314557696 30.342323326262555 5 12.731495925468694 38.224507495973235 36.25055046104378 12.79344611751429 6 29.5514239706794 38.56551865385841 19.071777210289017 12.811280165173164 7 26.13638297459445 32.58812974609378 23.937554206418042 17.33793307289373 8 24.304060499214053 36.73980770063279 21.719752258942844 17.23637954121031 9 25.480983602005637 16.377558263417928 21.685496293511992 36.45596184106444 10-11 24.104306638288882 26.760316335399715 29.361227454795767 19.774149571515633 12-13 24.822200459134635 24.292502067315016 29.366919809971968 21.518377663578374 14-15 21.779105021249663 25.7692721076351 26.950871258544275 25.500751612570966 16-17 21.584014163455954 28.713242264063066 27.681771566503905 22.020972005977075 18-19 21.401873134963346 28.276232174392028 29.10503617741938 21.216858513225244 20-21 22.35804562979789 27.585995325326046 28.770487899873544 21.28547114500252 22-23 22.049797450535 27.51596429587458 28.58509791029209 21.84914034329833 24-25 21.764517252565646 27.570940445974834 28.83942987074995 21.82511243070957 26-27 21.875978822701743 27.763694929203623 28.583587071063743 21.77673917703089 28-29 21.678922098027805 28.08380439999707 28.542020960068665 21.69525254190646 30-31 22.008476665505412 27.825752372211227 28.529215559465015 21.636555402818345 32-33 21.765469451449256 27.956308816803087 28.456033225476695 21.82218850627096 34-35 21.784852112814274 28.067728722769843 28.534753601876915 21.61266556253897 36-37 21.858897932386835 27.89219020710166 28.511867926067747 21.737043934443765 38-39 21.74217088473398 27.99393333511304 28.563977677520754 21.699918102632225 40-41 21.94238206442689 27.8765936925286 28.474722664160794 21.70630157888371 42-43 21.879846607754697 27.985682805227146 28.299322105845288 21.835148481172865 44-45 21.971484395577335 28.232563430948375 28.036583903006516 21.759368270467775 46-47 21.927106814155557 28.031715071093476 27.896111626111242 22.145066488639724 48-49 21.981748854269316 27.995832194722365 27.995579472001907 22.026839479006405 50-51 21.836911463433932 28.13818860291634 27.896902877705564 22.127997055944164 52-53 21.952824007053763 28.155207801722543 27.722938501968393 22.169029689255307 54-55 21.977666520217802 28.07909861429173 27.76265581040513 22.18057905508534 56-57 22.086442449495088 28.09713748108432 27.67492374901972 22.141496320400865 58-59 21.992818640338943 28.1545572933366 27.848618130732078 22.004005935592374 60-61 22.067367088976503 28.143872685900046 27.723087338131293 22.065672886992164 62-63 22.08624092118713 28.01682224080455 27.658194797110568 22.23874204089775 64-65 21.91440347484284 28.13012283140689 27.71494596229875 22.24052773145152 66-67 22.009519825098216 28.18875440461253 27.525214700217404 22.276511070071848 68-69 22.0176144982121 28.150640333142164 27.644720686999435 22.187024481646297 70-71 21.997025529621393 27.839249291052077 27.649259493305568 22.514465686020962 72-73 22.034029828291285 27.95654815184041 27.80200613039164 22.207415889476668 74-75 22.01548069473774 28.044201801693625 27.648188280716905 22.292129222851727 76-77 21.955155298033585 28.02457508387176 27.543534830301663 22.47673478779299 78-79 22.079876739027085 28.01119839220006 27.492693188422106 22.416231680350744 80-81 21.96733443418559 28.05633829919529 27.51489217380637 22.46143509281275 82-83 22.145141646486643 27.892249854114183 27.763697509063217 22.198910990335953 84-85 22.38389875922338 27.923636588482626 27.530967888206437 22.161496764087556 86-87 21.910116056819675 28.036352122694158 27.690664737870623 22.362867082615544 88-89 22.18062335854835 27.885945889362183 27.63306115131848 22.300369600770985 90-91 22.212084316589475 27.945358564922874 27.623718181759514 22.21883893672814 92-93 22.237528507151332 27.86693898182962 27.64250953188665 22.2530229791324 94-95 21.974879659181656 27.98433681749501 27.81008802045905 22.230695502864283 96-97 21.95134027778877 27.980075066679838 27.855227706256454 22.21335694927494 98-99 22.25795776092197 28.603457730340143 27.800934265979237 21.337650242758652 100-101 26.319332107708775 35.57964293766993 28.432271742044797 9.6687532125765 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 670.0 1 722.5 2 1396.0 3 2146.5 4 3218.5 5 5583.0 6 7294.0 7 8113.0 8 8303.0 9 7585.5 10 6481.0 11 5563.5 12 6238.5 13 8925.5 14 14535.5 15 21676.5 16 27153.5 17 30204.0 18 31018.0 19 30187.0 20 28757.5 21 27747.0 22 28671.5 23 32804.0 24 40073.5 25 50212.5 26 64162.0 27 79495.5 28 95025.0 29 112233.0 30 127358.5 31 141813.5 32 158134.5 33 173850.0 34 190848.5 35 208992.5 36 226418.5 37 242895.0 38 252552.0 39 257744.0 40 266400.5 41 273935.0 42 278334.0 43 283744.0 44 290037.0 45 296785.5 46 300976.0 47 304447.0 48 304559.0 49 296796.5 50 288499.5 51 279952.5 52 267558.5 53 254311.0 54 239247.5 55 218969.0 56 198152.0 57 175531.0 58 151260.0 59 130349.5 60 109710.5 61 88714.5 62 69492.0 63 53287.5 64 39951.0 65 28991.5 66 21105.5 67 15844.5 68 12072.5 69 8856.0 70 6400.5 71 4754.5 72 3506.0 73 2519.0 74 1737.0 75 1198.5 76 844.0 77 540.0 78 337.5 79 231.0 80 158.5 81 104.0 82 77.5 83 60.0 84 41.5 85 27.0 86 18.5 87 14.5 88 10.0 89 5.5 90 2.5 91 1.5 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.001985391696882935 3 5.971102847768227E-4 4 0.0 5 0.0 6 3.1348289950783184E-4 7 0.0 8 0.0 9 1.4927757119420565E-5 10-11 4.1051332078406553E-4 12-13 3.508022923063833E-4 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 5.9746891257222463E-5 28-29 1.4947772482944591E-5 30-31 5.990996131913348E-5 32-33 2.4800903233864927E-4 34-35 3.774363991359726E-5 36-37 6.913115433454237E-4 38-39 2.3013444914788116E-4 40-41 6.20264282205362E-5 42-43 0.0 44-45 7.933429639880208E-6 46-47 1.689108211993698E-4 48-49 5.7066388182692335E-5 50-51 4.377083605352562E-4 52-53 0.0 54-55 6.67721215404751E-4 56-57 7.701032896758926E-5 58-59 8.66560362818425E-6 60-61 9.2170760994282E-4 62-63 0.0 64-65 0.0 66-67 5.470008173103878E-5 68-69 9.24121578543819E-6 70-71 1.874035925643502E-5 72-73 7.598397346031775E-5 74-75 2.886465220258945E-5 76-77 4.8748456501996E-5 78-79 1.1858083640795325E-4 80-81 1.002232472833236E-5 82-83 1.0166257966152665E-5 84-85 2.061090304404488E-5 86-87 5.954328420699E-4 88-89 7.416590637783355E-5 90-91 0.0 92-93 2.1853975451210835E-5 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 184.0 20-21 551.0 22-23 978.0 24-25 1670.0 26-27 3744.0 28-29 9811.0 30-31 22741.0 32-33 27436.0 34-35 36779.0 36-37 58736.0 38-39 70602.0 40-41 68849.0 42-43 73790.0 44-45 84991.0 46-47 84296.0 48-49 80793.0 50-51 73226.0 52-53 66524.0 54-55 71560.0 56-57 73543.0 58-59 73128.0 60-61 73592.0 62-63 68654.0 64-65 69774.0 66-67 74195.0 68-69 74115.0 70-71 73423.0 72-73 67909.0 74-75 68161.0 76-77 67811.0 78-79 70581.0 80-81 71526.0 82-83 67222.0 84-85 65080.0 86-87 66716.0 88-89 69534.0 90-91 72810.0 92-93 72522.0 94-95 76114.0 96-97 114684.0 98-99 504930.0 100-101 3825645.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 83.56704651405465 #Duplication Level Percentage of deduplicated Percentage of total 1 88.92614917673929 74.31295644568335 2 7.3697327369574 12.31733596850941 3 2.022113223726573 5.069460894715306 4 0.7903010714157817 2.6417250558043945 5 0.3688888010404717 1.5413473797531476 6 0.18936576394472507 0.9494842562243 7 0.10371756746208409 0.6067159549100009 8 0.0684955179758379 0.45791745093528907 9 0.04263172532549044 0.32063466359246956 >10 0.11603520774497436 1.3962249163996443 >50 0.001614273318791465 0.0890584684259806 >100 6.613074413999034E-4 0.12395268235304376 >500 2.349015890777721E-4 0.10919204464106237 >1k 5.872531804240381E-5 0.06399381805260013 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 1.4927757119420565E-5 0.0 4 0.0 0.0 0.0 4.4783271358261695E-5 0.0 5 0.0 0.0 0.0 4.4783271358261695E-5 0.0 6 0.0 0.0 0.0 4.4783271358261695E-5 0.0 7 0.0 0.0 0.0 5.971102847768226E-5 0.0 8 0.0 0.0 0.0 5.971102847768226E-5 0.0 9 0.0 0.0 0.0 8.956654271652339E-5 0.0 10-11 0.0 0.0 0.0 1.0449429983594395E-4 0.0 12-13 0.0 0.0 0.0 1.1942205695536452E-4 7.4638785597102825E-6 14-15 0.0 0.0 0.0 1.1942205695536452E-4 2.985551423884113E-5 16-17 0.0 0.0 0.0 1.2688593551507478E-4 4.4783271358261695E-5 18-19 0.0 0.0 0.0 1.3434981407478506E-4 7.463878559710282E-5 20-21 0.0 0.0 0.0 1.5674144975391592E-4 8.956654271652339E-5 22-23 0.0 0.0 0.0 3.2841065662725236E-4 1.1942205695536452E-4 24-25 0.0 0.0 0.0 5.224714991797197E-4 1.4927757119420564E-4 26-27 0.0 0.0 0.0 6.86676827493346E-4 1.716692068733365E-4 28-29 0.0 1.4927757119420565E-5 0.0 0.0017540114615319162 1.8659696399275707E-4 30-31 0.0 1.4927757119420565E-5 0.0 0.004679851856938347 1.9406084255246732E-4 32-33 0.0 1.4927757119420565E-5 0.0 0.009859783577377282 1.9406084255246732E-4 34-35 0.0 1.4927757119420565E-5 0.0 0.016181688717451893 2.089885996718879E-4 36-37 0.0 1.4927757119420565E-5 0.0 0.02565335060972424 2.089885996718879E-4 38-39 0.0 1.4927757119420565E-5 0.0 0.0427605602685802 2.089885996718879E-4 40-41 0.0 1.4927757119420565E-5 0.0 0.08083380480166236 2.089885996718879E-4 42-43 0.0 1.4927757119420565E-5 0.0 0.0961795391204267 2.2391635679130847E-4 44-45 0.0 1.4927757119420565E-5 0.0 0.11595135342509924 2.3884411391072904E-4 46-47 0.0 1.4927757119420565E-5 0.0 0.1379921868119237 2.686996281495702E-4 48-49 0.0 1.4927757119420565E-5 0.0 0.15708478816766258 3.284106566272524E-4 50-51 0.0 1.4927757119420565E-5 0.0 0.17699095228640993 3.284106566272524E-4 52-53 0.0 1.4927757119420565E-5 0.0 0.20312199112395563 3.5080229230638325E-4 54-55 0.0 1.4927757119420565E-5 0.0 0.25223431204684926 3.8065780654522434E-4 56-57 0.0 1.4927757119420565E-5 0.0 0.30414558742963427 4.030494422243552E-4 58-59 0.0 1.4927757119420565E-5 0.0 0.3555567829489187 4.179771993437758E-4 60-61 0.0 1.4927757119420565E-5 0.0 0.38818139613341235 4.179771993437758E-4 62-63 0.0 1.4927757119420565E-5 0.0 0.40468403162893174 4.776882278214581E-4 64-65 0.0 1.4927757119420565E-5 0.0 0.42006708534049464 4.8515210638116834E-4 66-67 0.0 1.4927757119420565E-5 0.0 0.4286430818056018 5.000798635005889E-4 68-69 0.0 1.4927757119420565E-5 0.0 0.43661450410737235 5.224714991797197E-4 70-71 0.0 1.4927757119420565E-5 0.0 0.4441754130883589 5.373992562991403E-4 72-73 0.0 1.4927757119420565E-5 0.0 0.44998977448637323 6.120380418962432E-4 74-75 0.0 1.4927757119420565E-5 0.0 0.454632306950513 6.195019204559534E-4 76-77 0.0 1.4927757119420565E-5 0.0 0.4592748394146528 6.34429677575374E-4 78-79 0.0 1.4927757119420565E-5 0.0 0.46320083953706037 6.418935561350842E-4 80-81 0.0 1.4927757119420565E-5 0.0 0.4650220259056297 6.717490703739254E-4 82-83 0.0 1.4927757119420565E-5 0.0 0.46571616661168275 7.165323417321871E-4 84-85 0.0 1.4927757119420565E-5 0.0 0.46623863811086247 7.165323417321871E-4 86-87 0.0 1.4927757119420565E-5 0.0 0.4664252350748552 7.239962202918973E-4 88-89 0.0 1.4927757119420565E-5 0.0 0.4664924099818926 7.314600988516076E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7800 0.0 36.379124 1 GTATCAA 12490 0.0 31.156206 1 ATCAACG 13870 0.0 27.228313 3 CAACGCA 14080 0.0 26.706312 5 TCAACGC 14570 0.0 26.00517 4 AACGCAG 14750 0.0 25.6604 6 TATCAAC 15360 0.0 25.121132 2 ACGCAGA 16450 0.0 22.859167 7 CGCAGAG 16650 0.0 22.609213 8 TACATGG 18125 0.0 22.03544 2 GTACATG 18545 0.0 21.84595 1 ACATGGG 17850 0.0 21.731537 3 CATGGGG 12515 0.0 19.75758 4 GCAGAGT 20370 0.0 18.520546 9 TAACGCC 535 0.0 18.39521 4 GTACTAG 2290 0.0 17.727215 1 AGAGTAC 18180 0.0 16.668737 10-11 CAGAGTA 19605 0.0 16.576185 10-11 GAGTACT 11775 0.0 15.966968 12-13 ATGGGGG 8865 0.0 15.958336 5 >>END_MODULE