##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2140014_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8184774 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.68610544408435 34.0 31.0 34.0 31.0 34.0 2 32.86850021759917 34.0 31.0 34.0 31.0 34.0 3 32.96740887408742 34.0 31.0 34.0 31.0 34.0 4 36.37050577083741 37.0 37.0 37.0 35.0 37.0 5 36.20796701289492 37.0 37.0 37.0 35.0 37.0 6 36.26162041859678 37.0 37.0 37.0 35.0 37.0 7 36.26099034622092 37.0 37.0 37.0 35.0 37.0 8 36.242755267280444 37.0 37.0 37.0 35.0 37.0 9 38.133832406368214 39.0 39.0 39.0 37.0 39.0 10-11 38.02620225066691 39.0 38.0 39.0 36.0 39.0 12-13 38.064491762387085 39.0 38.0 39.0 36.0 39.0 14-15 39.48230323769477 40.5 39.0 41.0 37.0 41.0 16-17 39.461231428015 40.0 39.0 41.0 37.0 41.0 18-19 39.50686787442146 40.5 39.0 41.0 37.0 41.0 20-21 39.521100009689654 41.0 39.0 41.0 37.0 41.0 22-23 39.455575126769276 40.0 39.0 41.0 37.0 41.0 24-25 39.41204965520711 41.0 39.0 41.0 37.0 41.0 26-27 39.37383202641881 40.0 39.0 41.0 36.5 41.0 28-29 39.27750580620054 40.0 39.0 41.0 36.0 41.0 30-31 39.185786169718796 40.0 39.0 41.0 36.0 41.0 32-33 39.080741077862314 40.0 39.0 41.0 35.5 41.0 34-35 39.00658706118437 40.0 39.0 41.0 35.0 41.0 36-37 39.00990178725574 40.0 39.0 41.0 35.0 41.0 38-39 39.00310649000697 40.0 38.5 41.0 35.0 41.0 40-41 38.959672604761245 40.0 38.0 41.0 35.0 41.0 42-43 38.9204878702798 40.0 38.0 41.0 35.0 41.0 44-45 38.88618319205732 40.0 38.0 41.0 35.0 41.0 46-47 38.81010331508804 40.0 38.0 41.0 35.0 41.0 48-49 38.77912744240201 40.0 38.0 41.0 35.0 41.0 50-51 38.678085683922916 40.0 38.0 41.0 35.0 41.0 52-53 38.5013845036775 40.0 38.0 41.0 34.5 41.0 54-55 38.358841324456606 40.0 37.5 41.0 34.0 41.0 56-57 38.18930150683724 40.0 37.0 41.0 34.0 41.0 58-59 37.993363682732316 40.0 37.0 41.0 34.0 41.0 60-61 37.851403207508376 39.0 36.0 41.0 34.0 41.0 62-63 37.6748143350172 39.0 36.0 41.0 33.5 41.0 64-65 37.414048068298044 39.0 35.5 40.5 33.0 41.0 66-67 37.13828083019599 38.5 35.0 40.0 33.0 41.0 68-69 36.87745587799067 37.5 35.0 40.0 33.0 41.0 70-71 36.577339770932866 37.0 35.0 39.5 32.5 41.0 72-73 36.226407819363345 36.5 35.0 39.0 32.0 41.0 74-75 35.847939668475505 36.0 35.0 39.0 32.0 40.5 76-77 33.93280668445251 34.5 32.0 36.5 29.0 39.0 78-79 35.00978183269523 35.0 34.0 37.0 31.0 39.0 80-81 34.947220153320444 35.0 34.0 37.0 31.0 39.0 82-83 34.681874958975115 35.0 34.0 36.5 31.0 39.0 84-85 34.44414975745913 35.0 34.0 36.0 31.0 37.0 86-87 34.24795768213261 35.0 34.0 36.0 31.0 37.0 88-89 34.10126176324381 35.0 34.0 35.0 31.0 36.5 90-91 33.96832244348953 35.0 34.0 35.0 31.0 36.0 92-93 33.88976413351074 35.0 34.0 35.0 31.0 36.0 94-95 33.81241138852839 35.0 34.0 35.0 31.0 36.0 96-97 33.77920249886454 35.0 34.0 35.0 31.0 36.0 98-99 33.810427139746224 35.0 34.0 35.0 31.0 35.0 100-101 32.57449246333761 34.0 31.5 35.0 28.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 6.0 20 27.0 21 108.0 22 449.0 23 1416.0 24 3769.0 25 8050.0 26 15634.0 27 25925.0 28 39185.0 29 55690.0 30 76248.0 31 101542.0 32 137412.0 33 191983.0 34 295338.0 35 481210.0 36 942138.0 37 1986902.0 38 2619628.0 39 1179521.0 40 22593.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.56629443891792 19.8662540957148 13.0964275861496 24.47102387921768 2 15.097208738486831 21.26138610329102 40.56374055286668 23.077664605355466 3 18.647159459820728 25.907489302201235 30.063081029578974 25.38227020839906 4 12.591954279983785 17.558383408020795 38.62217820553139 31.227484106464026 5 13.23583924777361 37.8889327372669 35.67943876248202 13.195789252477466 6 30.47170270064879 37.67061863895081 18.668249117202258 13.18942954319814 7 26.85027100320669 32.21404769392533 23.215301974129034 17.72037932873895 8 24.797308549297465 36.55317444153021 21.31064539567641 17.33887161349591 9 25.847878478723697 16.269323697320875 20.943262173051135 36.93953565090429 10-11 24.50770812989232 26.497829334664267 28.9711690803667 20.02329345507671 12-13 25.13275305061391 23.98906453541747 29.0944459363797 21.78373647758892 14-15 22.206225017986164 25.429665744159863 26.3737797677355 25.99032947011847 16-17 22.091734826729432 28.54944056292653 27.063892483691433 22.294932126652604 18-19 22.11766018218707 27.90736188928369 28.466186115829224 21.50879181270002 20-21 22.822916257482984 27.120834031554697 28.30098137494637 21.75526833601595 22-23 22.574906482025064 27.13352858362768 28.06882136039931 22.222743573947948 24-25 22.354704967998064 27.238257936595478 28.202786046534083 22.20425104887238 26-27 22.325468776925153 27.380647248332373 28.115435123904525 22.178448850837952 28-29 22.218452806810298 27.447646041534746 28.15952114368821 22.174380007966747 30-31 22.476159001017937 27.303723108530754 28.016781063513868 22.203336826937438 32-33 22.26984157025295 27.460685054974928 28.050664238903316 22.218809135868803 34-35 22.401356305319915 27.51551196196563 28.042350067479777 22.04078166523468 36-37 22.38178219172349 27.425830882911427 27.99308043222497 22.19930649314011 38-39 22.213422134221343 27.518950189501894 28.0790182901829 22.18860938609386 40-41 22.420140711457268 27.368089629964633 28.00522099891363 22.206548659664474 42-43 22.301199873882315 27.46579032349593 27.90600618933481 22.32700361328694 44-45 22.37902347383326 27.566340784366698 27.73674492048899 22.31789082131105 46-47 22.505743017050293 27.535637907162684 27.480651850311038 22.477967225475982 48-49 22.411989612600056 27.610784928776305 27.522191699836807 22.45503375878684 50-51 22.34489612814122 27.729477050666418 27.515244540793315 22.41038228039905 52-53 22.54344322625688 27.590636785044808 27.40408367602552 22.461836312672787 54-55 22.48209221330043 27.523693024563052 27.44632818481075 22.547886577325773 56-57 22.504550544937484 27.646606329164 27.37941887276761 22.469424253130907 58-59 22.445843599880995 27.755892761416412 27.38879361101152 22.40947002769107 60-61 22.55215795403757 27.725718251115122 27.33836609591105 22.383757698936265 62-63 22.489871830215936 27.800419613341077 27.31633332231353 22.393375234129458 64-65 22.46865785902558 27.765549790722478 27.279053693657357 22.48673865659459 66-67 22.547367513747503 27.713282232197894 27.215403126665112 22.523947127389487 68-69 22.49875715690371 27.67239170008452 27.288501883907806 22.540349259103966 70-71 22.50076263340138 27.466256816872246 27.35053871947757 22.682441830248806 72-73 22.54256372147877 27.557230492442475 27.297508303648794 22.60269748242996 74-75 22.399285664463562 27.653780630258566 27.305489571843655 22.641444133434216 76-77 22.551564268285844 27.61441344372919 27.19963266010511 22.634389627879855 78-79 22.526245633513746 27.592159964931856 27.164708552493018 22.716885849061377 80-81 22.46731071485059 27.644020272331993 27.215900588051532 22.672768424765877 82-83 22.580251333769404 27.610831255174105 27.282770612103064 22.526146798953427 84-85 22.63318216943815 27.610510817805995 27.20129829511888 22.555008717636976 86-87 22.501535876521253 27.610208854665586 27.29113101865221 22.59712425016095 88-89 22.533475085043154 27.5767957345873 27.26530439063739 22.624424789732156 90-91 22.564442181363866 27.611505982809142 27.24032789415104 22.583723941675952 92-93 22.60360340376448 27.551347394536705 27.2836942481704 22.56135495352841 94-95 22.457411981498794 27.61340165238454 27.35679372983366 22.572392636283002 96-97 22.50786585495435 27.62061646293174 27.338917404753293 22.532600277360615 98-99 22.77824093984063 28.189246918056032 27.386589305555354 21.64592283654799 100-101 26.96201979793895 35.23591706442829 27.935297890308192 9.86676524732456 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1440.0 1 1265.5 2 1714.5 3 2499.5 4 3341.5 5 5292.5 6 6994.5 7 8076.0 8 8714.5 9 8518.5 10 7677.0 11 6863.5 12 7406.5 13 9746.0 14 15065.0 15 22315.0 16 28276.5 17 31781.0 18 32805.5 19 31984.0 20 30702.5 21 29900.0 22 30779.0 23 35084.0 24 42888.0 25 54106.0 26 68905.5 27 85072.5 28 102509.0 29 121285.5 30 138562.5 31 155270.0 32 172299.0 33 188206.5 34 204007.0 35 221338.0 36 240821.0 37 258261.5 38 273134.0 39 286584.5 40 299013.5 41 311886.5 42 322049.0 43 331343.0 44 340722.0 45 349358.0 46 355594.0 47 359439.5 48 363345.0 49 361359.0 50 355881.0 51 348779.5 52 335929.5 53 320995.0 54 304627.0 55 284303.0 56 261970.0 57 238220.0 58 212352.0 59 184527.5 60 155230.0 61 126933.0 62 101857.0 63 80021.0 64 60635.0 65 45910.0 66 35003.5 67 26819.0 68 20456.0 69 14835.0 70 10747.5 71 7873.5 72 5684.5 73 4029.0 74 2836.0 75 1999.0 76 1403.0 77 943.0 78 578.0 79 378.5 80 276.5 81 188.5 82 135.0 83 95.0 84 62.0 85 45.0 86 37.0 87 26.5 88 16.0 89 10.0 90 7.0 91 5.0 92 2.5 93 1.0 94 1.0 95 1.5 96 2.0 97 2.0 98 1.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 1.954849333652951E-4 3 0.004642767167425759 4 0.0 5 4.8871233341323775E-5 6 0.0 7 0.0 8 5.253657584192307E-4 9 0.002431343858730858 10-11 8.735732959761625E-4 12-13 3.420986333892665E-4 14-15 1.2828698752097493E-4 16-17 0.0014417013835690516 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 6.372018798925923E-4 32-33 8.356836937219262E-4 34-35 2.4668163859758527E-5 36-37 8.556381563279434E-4 38-39 6.750021937571298E-4 40-41 2.5223429135280312E-5 42-43 1.081516507536357E-4 44-45 9.832023414353276E-4 46-47 0.0 48-49 5.785646783371052E-4 50-51 3.32349423942067E-5 52-53 2.6857624375979884E-5 54-55 6.578714900267021E-4 56-57 7.885012114121221E-4 58-59 8.321878037052052E-5 60-61 1.4030411899921912E-4 62-63 2.1282879477110866E-5 64-65 0.0 66-67 0.0 68-69 2.2029710295357466E-5 70-71 4.608484696039959E-4 72-73 0.0 74-75 2.2819300198999512E-5 76-77 0.0 78-79 3.114390391171326E-4 80-81 0.0 82-83 0.0 84-85 8.081613303369944E-6 86-87 2.3723202903981806E-4 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 205.0 20-21 505.0 22-23 1138.0 24-25 2617.0 26-27 4383.0 28-29 9960.0 30-31 22615.0 32-33 27507.0 34-35 37896.0 36-37 59946.0 38-39 71711.0 40-41 69193.0 42-43 75091.0 44-45 87756.0 46-47 87958.0 48-49 84491.0 50-51 76911.0 52-53 73255.0 54-55 78813.0 56-57 82318.0 58-59 82488.0 60-61 80824.0 62-63 76338.0 64-65 78643.0 66-67 82832.0 68-69 82179.0 70-71 80536.0 72-73 74841.0 74-75 74843.0 76-77 75400.0 78-79 79966.0 80-81 80346.0 82-83 75933.0 84-85 74202.0 86-87 77135.0 88-89 82748.0 90-91 89115.0 92-93 87537.0 94-95 95234.0 96-97 148068.0 98-99 670961.0 100-101 4880336.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 86.38979642366034 #Duplication Level Percentage of deduplicated Percentage of total 1 90.22651295571858 77.9465008626128 2 7.037364535346398 12.159129791353248 3 1.612179568915052 4.178275942708674 4 0.5547922505870794 1.9171355834256856 5 0.2321123424227666 1.0026069004660874 6 0.12111545186468103 0.6277883538209656 7 0.06550816147911052 0.3961465713988039 8 0.04265919066379004 0.2948255037634347 9 0.024778818658333465 0.19265733895610018 >10 0.08082579525438396 1.0944235312687711 >50 0.001665227725865653 0.10037239242738699 >100 4.4264995488078554E-4 0.06427021259591469 >500 4.3051409113087617E-5 0.02586701520216878 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 1.2217808335330946E-5 0.0 0.0 0.0 2 0.0 2.443561667066189E-5 0.0 0.0 0.0 3 0.0 2.443561667066189E-5 0.0 2.443561667066189E-5 0.0 4 0.0 3.665342500599284E-5 0.0 2.443561667066189E-5 0.0 5 0.0 3.665342500599284E-5 0.0 2.443561667066189E-5 0.0 6 7.330685001198568E-5 3.665342500599284E-5 0.0 2.443561667066189E-5 1.2217808335330946E-5 7 7.330685001198568E-5 4.887123334132378E-5 0.0 3.665342500599284E-5 1.2217808335330946E-5 8 7.330685001198568E-5 4.887123334132378E-5 0.0 3.665342500599284E-5 1.2217808335330946E-5 9 7.330685001198568E-5 1.0996027501797851E-4 0.0 7.330685001198568E-5 2.443561667066189E-5 10-11 8.552465834731662E-5 1.2217808335330944E-4 0.0 7.330685001198568E-5 2.443561667066189E-5 12-13 9.774246668264756E-5 1.282869875209749E-4 0.0 8.552465834731662E-5 2.443561667066189E-5 14-15 9.774246668264756E-5 1.954849333652951E-4 0.0 1.0996027501797851E-4 3.665342500599284E-5 16-17 1.771582208622987E-4 2.1381164586829152E-4 0.0 1.282869875209749E-4 3.665342500599284E-5 18-19 1.9548493336529513E-4 2.1992055003595702E-4 0.0 1.6494041252696775E-4 3.665342500599284E-5 20-21 1.9548493336529513E-4 2.1992055003595702E-4 0.0 2.1992055003595702E-4 3.665342500599284E-5 22-23 2.1381164586829152E-4 2.5046507087428437E-4 0.0 2.810095917126118E-4 4.8871233341323775E-5 24-25 2.443561667066189E-4 3.0544520838327364E-4 0.0 3.2377192088627006E-4 6.108904167665472E-5 26-27 2.443561667066189E-4 3.35989729221601E-4 0.0 3.6653425005992834E-4 6.108904167665472E-5 28-29 2.443561667066189E-4 3.482075375569319E-4 0.0 6.658705542755365E-4 6.108904167665472E-5 30-31 2.6268287920961535E-4 3.9707877089825575E-4 0.0 0.0017899089211259834 6.108904167665472E-5 32-33 2.687917833772808E-4 4.092965792335866E-4 0.0 0.004184599354850849 8.552465834731662E-5 34-35 2.810095917126118E-4 4.948212375809033E-4 0.0 0.007006913080312297 8.552465834731662E-5 36-37 2.932274000479427E-4 5.8034589592822E-4 0.0 0.011613026822732063 9.774246668264756E-5 38-39 2.932274000479427E-4 6.047815125988817E-4 0.0 0.0185771775738707 9.774246668264756E-5 40-41 3.0544520838327364E-4 6.475438417725401E-4 0.0 0.025822337916721953 9.774246668264756E-5 42-43 3.0544520838327364E-4 6.658705542755365E-4 0.0 0.032847577709537244 9.774246668264756E-5 44-45 3.298808250539355E-4 7.147417876168603E-4 0.0 0.040666975044149054 9.774246668264756E-5 46-47 3.543164417245974E-4 7.575041167905185E-4 0.0 0.0491339162205334 1.1606917918564397E-4 48-49 3.604253458922629E-4 7.575041167905185E-4 0.0 0.05738093684688178 1.2217808335330944E-4 50-51 3.970787708982557E-4 8.491376793055008E-4 0.0 0.0654630170607032 1.2217808335330944E-4 52-53 4.154054834012521E-4 8.552465834731662E-4 0.0 0.07302584042027305 1.282869875209749E-4 54-55 4.154054834012521E-4 8.552465834731662E-4 0.0 0.08090632679656151 1.343958916886404E-4 56-57 4.154054834012521E-4 8.674643918084971E-4 0.0 0.08879292207701764 1.405047958563059E-4 58-59 4.154054834012521E-4 8.735732959761625E-4 0.0 0.09607473584487489 1.4661370002397135E-4 60-61 4.2762329173658305E-4 8.919000084791589E-4 0.0 0.10347261879191777 1.4661370002397135E-4 62-63 4.642767167425759E-4 9.041178168144899E-4 0.0 0.11028404693886477 1.4661370002397135E-4 64-65 4.642767167425759E-4 9.407712418204828E-4 0.0 0.11716878193582377 1.5272260419163682E-4 66-67 4.703856209102414E-4 9.407712418204828E-4 0.0 0.12418180392030373 1.5883150835930228E-4 68-69 4.764945250779069E-4 9.529890501558138E-4 0.0 0.13109097453393337 1.5883150835930228E-4 70-71 4.887123334132379E-4 9.713157626588101E-4 0.0 0.1377069177475151 1.5883150835930228E-4 72-73 5.131479500838997E-4 9.83533570994141E-4 0.0 0.14291170409836607 1.8326712502996417E-4 74-75 5.131479500838997E-4 0.0010140780918324686 0.0 0.14698634317819895 1.8326712502996417E-4 76-77 5.192568542515652E-4 0.0010751671335091232 0.0 0.15074942814548087 1.8326712502996417E-4 78-79 5.375835667545616E-4 0.001087384941844454 0.0 0.15404823639602022 1.8937602919762966E-4 80-81 5.375835667545616E-4 0.001087384941844454 0.0 0.15544106654624795 2.015938375329606E-4 82-83 5.375835667545616E-4 0.0010934938460121196 0.0 0.15605806586718218 2.1992055003595702E-4 84-85 5.436924709222271E-4 0.0010996027501797851 0.0 0.15657121381726608 2.1992055003595702E-4 86-87 5.620191834252236E-4 0.0011179294626827816 0.0 0.156827787792308 2.1992055003595702E-4 88-89 5.742369917605544E-4 0.0011606917918564397 0.0 0.156937748067326 2.1992055003595702E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8225 0.0 43.04634 1 GTATCAA 14120 0.0 33.36399 1 ATCAACG 16200 0.0 28.073719 3 TCAACGC 16185 0.0 28.072538 4 CAACGCA 16445 0.0 27.552618 5 AACGCAG 17185 0.0 26.463634 6 TATCAAC 17540 0.0 26.33428 2 GTACATG 24405 0.0 22.283695 1 ACGCAGA 20435 0.0 22.213926 7 CGCAGAG 20605 0.0 22.010366 8 TACATGG 23955 0.0 21.969404 2 ACATGGG 24315 0.0 21.145449 3 CATGGGG 18475 0.0 18.620024 4 GCAGAGT 25490 0.0 17.67743 9 AGAGTAC 22030 0.0 16.924215 10-11 GAGTACT 12635 0.0 16.49064 12-13 CAGAGTA 24555 0.0 16.247787 10-11 GTGGTAT 4780 0.0 15.128884 1 AGTACTT 14300 0.0 14.629035 12-13 ATGGGGG 11120 0.0 14.584598 5 >>END_MODULE