##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2140011_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8768782 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.693785864445026 34.0 31.0 34.0 31.0 34.0 2 32.8739925339688 34.0 31.0 34.0 31.0 34.0 3 32.97204868361421 34.0 31.0 34.0 31.0 34.0 4 36.37478603071669 37.0 37.0 37.0 35.0 37.0 5 36.215919953307086 37.0 37.0 37.0 35.0 37.0 6 36.270111858180535 37.0 37.0 37.0 35.0 37.0 7 36.26923077800315 37.0 37.0 37.0 35.0 37.0 8 36.25160198987727 37.0 37.0 37.0 35.0 37.0 9 38.14077428313305 39.0 39.0 39.0 37.0 39.0 10-11 38.03406676092529 39.0 38.0 39.0 36.0 39.0 12-13 38.07409854641158 39.0 38.0 39.0 37.0 39.0 14-15 39.49369747132498 41.0 39.0 41.0 37.0 41.0 16-17 39.47639700701876 40.0 39.0 41.0 37.0 41.0 18-19 39.5225655626973 41.0 39.0 41.0 37.0 41.0 20-21 39.53846126775527 41.0 39.0 41.0 37.0 41.0 22-23 39.473959024979244 41.0 39.0 41.0 37.0 41.0 24-25 39.43295181194 41.0 39.0 41.0 37.0 41.0 26-27 39.396733519547816 40.5 39.0 41.0 37.0 41.0 28-29 39.2992140665324 40.0 39.0 41.0 36.0 41.0 30-31 39.20387520670144 40.0 39.0 41.0 36.0 41.0 32-33 39.099362081102356 40.0 39.0 41.0 35.5 41.0 34-35 39.02732192013838 40.0 39.0 41.0 35.0 41.0 36-37 39.030114187877544 40.0 39.0 41.0 35.0 41.0 38-39 39.02725851065283 40.0 39.0 41.0 35.0 41.0 40-41 38.97890666887463 40.0 39.0 41.0 35.0 41.0 42-43 38.94181857129719 40.0 38.0 41.0 35.0 41.0 44-45 38.9072868870025 40.0 38.0 41.0 35.0 41.0 46-47 38.835401495407226 40.0 38.0 41.0 35.0 41.0 48-49 38.80927722491998 40.0 38.0 41.0 35.0 41.0 50-51 38.715576787118145 40.0 38.0 41.0 35.0 41.0 52-53 38.54590960339519 40.0 38.0 41.0 34.5 41.0 54-55 38.41274096491934 40.0 38.0 41.0 34.0 41.0 56-57 38.2533127700534 40.0 37.0 41.0 34.0 41.0 58-59 38.06636301434328 40.0 37.0 41.0 34.0 41.0 60-61 37.941905326931504 39.5 36.5 41.0 34.0 41.0 62-63 37.7767979198058 39.0 36.0 41.0 33.5 41.0 64-65 37.52676788732667 39.0 36.0 41.0 33.0 41.0 66-67 37.26235956589768 39.0 35.0 40.0 33.0 41.0 68-69 37.008592855840405 38.0 35.0 40.0 33.0 41.0 70-71 36.71478968036152 37.0 35.0 40.0 33.0 41.0 72-73 36.36335061324669 37.0 35.0 39.0 32.0 41.0 74-75 35.9835255657302 36.0 35.0 39.0 32.0 40.5 76-77 34.05330745620131 34.5 32.5 36.5 29.0 39.0 78-79 35.12329170372077 35.0 34.0 37.0 31.0 39.0 80-81 35.05131223161249 35.0 34.0 37.0 31.0 39.0 82-83 34.77227162488621 35.0 34.0 36.5 31.0 39.0 84-85 34.52337904044576 35.0 34.0 36.0 31.0 37.5 86-87 34.314593640660064 35.0 34.0 36.0 31.0 37.0 88-89 34.15948272118638 35.0 34.0 35.5 31.0 37.0 90-91 34.01406255850283 35.0 34.0 35.0 31.0 36.0 92-93 33.928037392503946 35.0 34.0 35.0 31.0 36.0 94-95 33.842989175022055 35.0 34.0 35.0 31.0 36.0 96-97 33.8050599023877 35.0 34.0 35.0 31.0 36.0 98-99 33.83455202334018 35.0 34.0 35.0 31.0 35.0 100-101 32.564591764667306 34.0 31.5 35.0 28.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 1.0 19 8.0 20 33.0 21 105.0 22 450.0 23 1440.0 24 3924.0 25 8608.0 26 16424.0 27 27534.0 28 41773.0 29 59820.0 30 81268.0 31 108838.0 32 146230.0 33 203574.0 34 311305.0 35 504568.0 36 987663.0 37 2103648.0 38 2861611.0 39 1274910.0 40 25045.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.415993464086576 20.042019518788358 13.137970587021094 24.404016430103976 2 14.947584426911511 21.40619982191341 40.79014292543719 22.85607282573789 3 18.49680321948717 25.94401708051672 30.230625979588183 25.328553720407925 4 12.32206182482025 17.68087130974722 39.284194282075404 30.712872583357132 5 13.033477861230411 37.96625072130901 36.00410775501267 12.996163662447913 6 30.09883242621381 38.16506100847301 18.872062277292333 12.864044288020846 7 26.644852158486778 32.37243211200826 23.48577031564931 17.496945413855652 8 24.471529278135012 36.890911983413815 21.488559651352617 17.148999087098556 9 25.669091016085005 16.391854605636652 21.203181191665017 36.73587318661332 10-11 24.14538228858136 26.74175443702362 29.33191701042661 19.780946263968406 12-13 24.87161802007446 24.21502530462139 29.391712893302742 21.521643782001412 14-15 21.900451642410424 25.72489185631263 26.75334811647262 25.62130838480433 16-17 21.710465055345786 28.840272860873768 27.482588671487367 21.966673412293087 18-19 21.740259935758466 28.23235883843389 28.87170076756384 21.155680458243804 20-21 22.46756308190666 27.4701684362434 28.722238207507093 21.34003027434284 22-23 22.13989900101633 27.442790452485806 28.601819770065756 21.81549077643211 24-25 21.939874273830213 27.47675723377786 28.727978627246998 21.85538986514493 26-27 21.952838964734493 27.66627517766495 28.563740510804138 21.817145346796416 28-29 21.842800728259686 27.829984819359517 28.540431943173367 21.786782509207438 30-31 22.138243418833245 27.65541241193235 28.46932695310649 21.737017216127917 32-33 21.908067617685777 27.784073438268393 28.43891763385088 21.86894131019495 34-35 22.005395953787627 27.819136972721516 28.47040706349307 21.705060009997787 36-37 22.02443921438569 27.760537778654886 28.450544477446343 21.764478529513077 38-39 21.85302722113405 27.889333227305958 28.4872195157339 21.770420035826092 40-41 22.072528390930245 27.74129106146544 28.390409003338597 21.795771544265722 42-43 21.97350547648074 27.827152324447134 28.242474147365915 21.956868051706213 44-45 22.047697541773044 27.942739226388134 28.12124296289645 21.888320268942373 46-47 22.05147945323996 27.93680948585705 27.912111872188017 22.099599188714976 48-49 22.060796527823157 27.98042645407283 27.945388591115005 22.013388426989003 50-51 22.009108105388723 28.104133921796116 27.866618185381004 22.02013978743416 52-53 22.211918820566694 27.95430303693383 27.746191945558056 22.087586196941412 54-55 22.12020471775157 27.91351976708723 27.831453102646353 22.134822412514847 56-57 22.15196859184093 28.004596100348905 27.791410492858958 22.052024814951203 58-59 22.127176675157564 28.066835072597947 27.7416958557238 22.06429239652069 60-61 22.173066869001122 28.051419940472925 27.766136097424816 22.009377093101136 62-63 22.13572609288928 28.068817341537688 27.72363015025508 22.07182641531795 64-65 22.12183728247993 28.032219290692602 27.732642919961346 22.113300506866118 66-67 22.18542033910022 28.061613132223563 27.61521803287842 22.137748495797805 68-69 22.125827898703303 28.063185711661333 27.69247180760116 22.118514582034205 70-71 22.124394817452647 27.884366606822432 27.721275600817137 22.269962974907784 72-73 22.174774571317243 27.920078704906526 27.704913816449384 22.200232907326843 74-75 22.033530777680447 28.0374796646227 27.675954893699856 22.253034663996996 76-77 22.164478236069844 27.977564751769098 27.60855600280409 22.249401009356973 78-79 22.130425667547446 28.01112121573298 27.603996139320135 22.254456977399435 80-81 22.12112288126595 28.012010313764446 27.616897452706922 22.24996935226268 82-83 22.21991246834289 27.98290869564774 27.669066333362625 22.128112502646744 84-85 22.26699626073417 27.958664598471266 27.603257407756914 22.17108173303765 86-87 22.08755354714316 27.987331692858536 27.697004508333915 22.228110251664393 88-89 22.156959957254855 27.9834788695022 27.656626917472018 22.202934255770927 90-91 22.2382092389362 27.990355898776315 27.66573969890185 22.105695163385633 92-93 22.231718003737477 27.96902255840139 27.651767591149007 22.147491846712125 94-95 22.07797361850626 28.028536228299295 27.712805679788772 22.180684473405677 96-97 22.08990377318642 28.05839135877914 27.747282353385206 22.104422514649233 98-99 22.380976393393244 28.595754287180792 27.78191502062378 21.24135429880218 100-101 23.099441508090344 31.230747267229347 24.873606646231 20.796204578449313 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1551.0 1 1331.0 2 1790.0 3 2628.0 4 3572.0 5 5741.0 6 7606.5 7 8979.5 8 9904.5 9 9789.0 10 8886.5 11 7926.0 12 8443.0 13 10910.0 14 16819.0 15 24799.5 16 31298.0 17 35390.0 18 36726.0 19 35805.5 20 34449.0 21 33912.0 22 35205.0 23 39962.5 24 48459.5 25 60881.0 26 76789.5 27 94944.5 28 115518.0 29 136943.5 30 157098.5 31 177578.0 32 198404.5 33 218874.5 34 238873.0 35 256758.5 36 275550.0 37 292519.5 38 305501.0 39 317658.0 40 329856.0 41 342971.0 42 352635.0 43 359418.0 44 367255.0 45 373755.5 46 377678.0 47 378975.5 48 376744.0 49 370652.5 50 362990.0 51 351816.0 52 335206.5 53 317647.5 54 297996.5 55 274250.0 56 250650.5 57 225451.0 58 198677.0 59 172301.0 60 144767.5 61 118326.0 62 94686.5 63 74425.0 64 56600.0 65 42776.5 66 32910.5 67 25240.0 68 19169.5 69 13964.5 70 10065.5 71 7404.5 72 5351.5 73 3795.5 74 2656.5 75 1819.0 76 1242.5 77 806.0 78 530.0 79 356.5 80 254.5 81 188.0 82 137.5 83 94.0 84 62.5 85 47.0 86 31.0 87 19.0 88 15.5 89 13.5 90 10.5 91 7.0 92 6.0 93 5.5 94 3.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 1.596572933390293E-4 3 0.004892355631603112 4 6.842455428815542E-5 5 2.280818476271847E-5 6 0.0 7 0.0 8 4.219514181102918E-4 9 0.0027825985410516534 10-11 7.526700971697095E-4 12-13 3.193145866780586E-4 14-15 9.69347852415535E-5 16-17 0.001568062702436895 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 8.003422263359813E-4 32-33 6.990884803054169E-4 34-35 2.8739173378604812E-5 36-37 8.256501200801285E-4 38-39 5.63848553533729E-4 40-41 3.5139995693007865E-5 42-43 8.852825494343251E-5 44-45 0.0010956509208529166 46-47 0.0 48-49 5.470836943832437E-4 50-51 2.4555769252137475E-5 52-53 6.19525715892941E-6 54-55 7.252524785190844E-4 56-57 9.660885857770166E-4 58-59 1.0207440713908404E-4 60-61 1.2248353547306912E-4 62-63 1.3023472791067615E-5 64-65 0.0 66-67 0.0 68-69 3.3608980749851314E-5 70-71 4.827769657454104E-4 72-73 0.0 74-75 1.3904529553451863E-5 76-77 0.0 78-79 3.9824125284422475E-4 80-81 0.0 82-83 0.0 84-85 2.948946945790393E-5 86-87 2.760394751370499E-4 88-89 0.0 90-91 0.0 92-93 0.0 94-95 2.3669725899840135E-5 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 216.0 20-21 540.0 22-23 1141.0 24-25 2885.0 26-27 4332.0 28-29 8923.0 30-31 19433.0 32-33 24901.0 34-35 34171.0 36-37 54196.0 38-39 64885.0 40-41 64400.0 42-43 71389.0 44-45 84873.0 46-47 86203.0 48-49 82394.0 50-51 75384.0 52-53 72313.0 54-55 77574.0 56-57 81032.0 58-59 81288.0 60-61 78739.0 62-63 76083.0 64-65 78544.0 66-67 83528.0 68-69 84918.0 70-71 83876.0 72-73 79064.0 74-75 80397.0 76-77 79232.0 78-79 84662.0 80-81 84811.0 82-83 80611.0 84-85 79509.0 86-87 82612.0 88-89 88954.0 90-91 95186.0 92-93 93462.0 94-95 104164.0 96-97 160584.0 98-99 730143.0 100-101 5367230.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 86.20232283132452 #Duplication Level Percentage of deduplicated Percentage of total 1 90.22151090910488 77.77303809716526 2 6.949576158458504 11.98139215104632 3 1.6384261698444738 4.237084248846716 4 0.5702028428555759 1.966112381567014 5 0.25310589978383846 1.0909158241839656 6 0.13808649869228992 0.7142026163352028 7 0.07044959772873484 0.4251043276724543 8 0.04150067838156063 0.2861963900453008 9 0.024300818026399367 0.18853082645192534 >10 0.09139134540081344 1.1869641755987064 >50 0.0011081060674278619 0.0650618376824576 >100 3.0087657760878133E-4 0.052057897568007466 >500 2.0049555531223413E-5 0.013117935582220606 >1k 2.0049522444423915E-5 0.02022129025450697 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1404092381359235E-5 2 0.0 4.561636952543694E-5 0.0 0.0 1.1404092381359235E-5 3 0.0 4.561636952543694E-5 0.0 0.0 1.1404092381359235E-5 4 0.0 6.842455428815541E-5 0.0 3.4212277144077704E-5 1.1404092381359235E-5 5 0.0 7.982864666951464E-5 0.0 3.4212277144077704E-5 1.1404092381359235E-5 6 0.0 7.982864666951464E-5 0.0 3.4212277144077704E-5 1.1404092381359235E-5 7 1.1404092381359235E-5 9.123273905087388E-5 0.0 4.561636952543694E-5 2.280818476271847E-5 8 1.1404092381359235E-5 9.123273905087388E-5 0.0 4.561636952543694E-5 2.280818476271847E-5 9 1.1404092381359235E-5 1.93869570483107E-4 0.0 1.0263683143223312E-4 2.280818476271847E-5 10-11 1.1404092381359235E-5 2.0527366286446624E-4 0.0 1.254450161949516E-4 2.280818476271847E-5 12-13 1.1404092381359235E-5 2.0527366286446624E-4 0.0 1.254450161949516E-4 2.280818476271847E-5 14-15 1.1404092381359235E-5 2.280818476271847E-4 0.0 1.4825320095767004E-4 2.280818476271847E-5 16-17 1.1404092381359235E-5 2.3378389381786433E-4 0.0 1.596572933390293E-4 2.280818476271847E-5 18-19 1.1404092381359235E-5 2.508900323899032E-4 0.0 1.6535933952970891E-4 2.280818476271847E-5 20-21 2.280818476271847E-5 2.7369821715262163E-4 0.0 2.280818476271847E-4 3.4212277144077704E-5 22-23 2.280818476271847E-5 3.193145866780586E-4 0.0 2.6229412477126243E-4 3.4212277144077704E-5 24-25 2.280818476271847E-5 3.535268638221363E-4 0.0 3.2501663286873823E-4 3.4212277144077704E-5 26-27 2.280818476271847E-5 3.535268638221363E-4 0.0 4.276534643009713E-4 3.4212277144077704E-5 28-29 3.4212277144077704E-5 3.649309562034955E-4 0.0 0.0011061969609918458 3.4212277144077704E-5 30-31 3.4212277144077704E-5 4.276534643009713E-4 0.0 0.0030334885734415564 3.4212277144077704E-5 32-33 3.4212277144077704E-5 4.4475960287301017E-4 0.0 0.006882369752150298 3.4212277144077704E-5 34-35 3.4212277144077704E-5 5.188862033518452E-4 0.0 0.01194008472328312 4.561636952543694E-5 36-37 3.4212277144077704E-5 5.816087114493211E-4 0.0 0.018286462133509533 4.561636952543694E-5 38-39 3.4212277144077704E-5 5.987148500213599E-4 0.0 0.02787730382623265 4.561636952543694E-5 40-41 3.4212277144077704E-5 6.27225080974758E-4 0.0 0.03767912122801091 4.561636952543694E-5 42-43 4.561636952543694E-5 6.728414505001949E-4 0.0 0.045935684112115 5.131841571611656E-5 44-45 4.561636952543694E-5 7.241598662163114E-4 0.0 0.05565767286722375 5.702046190679618E-5 46-47 5.131841571611656E-5 7.526700971697095E-4 0.0 0.06570467825520124 5.702046190679618E-5 48-49 5.702046190679618E-5 7.697762357417484E-4 0.0 0.0750845442388692 5.702046190679618E-5 50-51 5.702046190679618E-5 8.667110209833019E-4 0.0 0.08368893194060475 5.702046190679618E-5 52-53 5.702046190679618E-5 8.781151133646611E-4 0.0 0.0917630293466071 5.702046190679618E-5 54-55 5.702046190679618E-5 8.895192057460203E-4 0.0 0.0997344899211772 5.702046190679618E-5 56-57 5.702046190679618E-5 9.009232981273796E-4 0.0 0.10775726891146342 6.27225080974758E-5 58-59 5.702046190679618E-5 9.123273905087388E-4 0.0 0.11544932922269022 6.842455428815541E-5 60-61 5.702046190679618E-5 9.123273905087388E-4 0.0 0.12283347903962033 6.842455428815541E-5 62-63 6.842455428815541E-5 9.123273905087388E-4 0.0 0.12993252654701645 6.842455428815541E-5 64-65 6.842455428815541E-5 9.23731482890098E-4 0.0 0.1367521737910693 6.842455428815541E-5 66-67 7.982864666951464E-5 9.522417138434962E-4 0.0 0.14369156400512637 6.842455428815541E-5 68-69 9.123273905087388E-5 9.69347852415535E-4 0.0 0.15108141586824714 6.842455428815541E-5 70-71 9.123273905087388E-5 9.69347852415535E-4 0.0 0.15770719354181686 8.553069286019427E-5 72-73 9.123273905087388E-5 9.69347852415535E-4 0.0 0.16307852105343706 9.123273905087388E-5 74-75 9.123273905087388E-5 9.807519447968941E-4 0.0 0.16739497001978154 9.123273905087388E-5 76-77 9.123273905087388E-5 9.978580833689332E-4 0.0 0.17140921053802 9.123273905087388E-5 78-79 9.123273905087388E-5 0.0010035601295596127 0.0 0.17493877713005068 9.123273905087388E-5 80-81 9.123273905087388E-5 0.0010035601295596127 0.0 0.17642701118581805 1.0833887762291274E-4 82-83 9.123273905087388E-5 0.0010092621757502923 0.0 0.17690028101964445 1.254450161949516E-4 84-85 9.123273905087388E-5 0.0010491764990850495 0.0 0.1775046979158565 1.254450161949516E-4 86-87 9.123273905087388E-5 0.0011061969609918458 0.0 0.1776472490706235 1.254450161949516E-4 88-89 9.123273905087388E-5 0.0011974297000427198 0.0 0.1777555879482464 1.254450161949516E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8505 0.0 39.383232 1 GTATCAA 14580 0.0 33.677143 1 TCAACGC 16370 0.0 29.038929 4 ATCAACG 16450 0.0 28.949291 3 CAACGCA 16855 0.0 28.228754 5 AACGCAG 17545 0.0 27.11859 6 TATCAAC 17960 0.0 26.797632 2 ACGCAGA 20495 0.0 23.153297 7 CGCAGAG 20965 0.0 22.614067 8 GTACATG 22090 0.0 21.74919 1 TACATGG 21680 0.0 21.61429 2 ACATGGG 21825 0.0 20.734568 3 CATGGGG 15910 0.0 19.245596 4 GCAGAGT 25820 0.0 18.427406 9 AGAGTAC 22490 0.0 17.46065 10-11 GAGTACT 14815 0.0 17.01424 12-13 CAGAGTA 25290 0.0 15.88703 10-11 ATGGGGG 10645 0.0 15.25645 5 GAGTACA 15785 0.0 15.164647 1 AGTACTT 16845 0.0 14.875969 12-13 >>END_MODULE