##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2140006_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8649139 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.70278983838738 34.0 31.0 34.0 31.0 34.0 2 32.89823310736479 34.0 31.0 34.0 31.0 34.0 3 32.99849418537498 34.0 31.0 34.0 31.0 34.0 4 36.39577222657654 37.0 37.0 37.0 35.0 37.0 5 36.222893862614534 37.0 37.0 37.0 35.0 37.0 6 36.274393324006006 37.0 37.0 37.0 35.0 37.0 7 36.28170989042955 37.0 37.0 37.0 35.0 37.0 8 36.273170658952296 37.0 37.0 37.0 35.0 37.0 9 38.18726453581102 39.0 39.0 39.0 37.0 39.0 10-11 38.08447060453069 39.0 38.0 39.0 37.0 39.0 12-13 38.124770627457835 39.0 38.0 39.0 37.0 39.0 14-15 39.55906952125524 41.0 39.0 41.0 37.0 41.0 16-17 39.54425943437838 41.0 39.0 41.0 37.0 41.0 18-19 39.595401923821555 41.0 39.5 41.0 37.0 41.0 20-21 39.61536584545034 41.0 40.0 41.0 37.0 41.0 22-23 39.55654741523858 41.0 39.0 41.0 37.0 41.0 24-25 39.516165019071295 41.0 39.0 41.0 37.0 41.0 26-27 39.479444771990416 41.0 39.0 41.0 37.0 41.0 28-29 39.388870531429 40.5 39.0 41.0 37.0 41.0 30-31 39.30199130767778 40.0 39.0 41.0 36.0 41.0 32-33 39.20479840219949 40.0 39.0 41.0 36.0 41.0 34-35 39.13472971820419 40.0 39.0 41.0 36.0 41.0 36-37 39.138258185726215 40.0 39.0 41.0 35.0 41.0 38-39 39.13723886250206 40.0 39.0 41.0 35.0 41.0 40-41 39.095597159359556 40.0 39.0 41.0 35.0 41.0 42-43 39.0612450271501 40.0 39.0 41.0 35.0 41.0 44-45 39.02933904388698 40.0 39.0 41.0 35.0 41.0 46-47 38.958608129026 40.0 38.5 41.0 35.0 41.0 48-49 38.93064998760469 40.0 38.5 41.0 35.0 41.0 50-51 38.84181037409376 40.0 38.0 41.0 35.0 41.0 52-53 38.67600300776445 40.0 38.0 41.0 35.0 41.0 54-55 38.54258878535132 40.0 38.0 41.0 34.5 41.0 56-57 38.38586164224104 40.0 37.5 41.0 34.0 41.0 58-59 38.197669803858474 40.0 37.0 41.0 34.0 41.0 60-61 38.06975950194537 40.0 37.0 41.0 34.0 41.0 62-63 37.89914350943458 39.0 36.0 41.0 34.0 41.0 64-65 37.64965727450734 39.0 36.0 41.0 34.0 41.0 66-67 37.37490302640907 39.0 35.0 40.0 33.0 41.0 68-69 37.118087347870556 38.0 35.0 40.0 33.0 41.0 70-71 36.822911748504524 37.0 35.0 40.0 33.0 41.0 72-73 36.47361955009101 37.0 35.0 39.0 33.0 41.0 74-75 36.095055638378106 36.0 35.0 39.0 32.5 40.5 76-77 34.16257620600133 34.5 33.0 36.5 29.5 39.0 78-79 35.20132437175005 35.0 34.0 37.0 31.5 39.0 80-81 35.12514224481623 35.0 34.0 37.0 32.0 39.0 82-83 34.852667410814874 35.0 34.0 36.5 32.0 39.0 84-85 34.60898723459648 35.0 34.0 36.0 31.5 37.5 86-87 34.40488727704728 35.0 34.0 36.0 31.0 37.0 88-89 34.25057143443206 35.0 34.0 35.5 31.0 37.0 90-91 34.1071900531024 35.0 34.0 35.0 31.0 36.0 92-93 34.022509778435726 35.0 34.0 35.0 31.0 36.0 94-95 33.94260647820009 35.0 34.0 35.0 31.0 36.0 96-97 33.90506728337787 35.0 34.0 35.0 31.0 36.0 98-99 33.92593287815485 35.0 34.0 35.0 31.0 35.5 100-101 32.68765184343109 34.0 31.5 35.0 28.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 8.0 20 35.0 21 92.0 22 408.0 23 1226.0 24 3336.0 25 7411.0 26 13930.0 27 23644.0 28 35864.0 29 51245.0 30 70311.0 31 95036.0 32 128387.0 33 178872.0 34 278086.0 35 456313.0 36 913218.0 37 2037699.0 38 2921941.0 39 1405417.0 40 26659.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.59171924511793 19.964958361751385 12.957486288519585 24.485836104611106 2 14.86807265990274 21.523734735002428 40.7103175965824 22.89787500851243 3 18.48334179702134 26.262754500323286 30.17171805466525 25.08218564799013 4 12.23943062058453 17.71426648858337 39.301544107989514 30.744758782842585 5 12.962423196112352 38.15118475954659 35.86610181660856 13.020290227732495 6 29.848346754515102 38.14588943477496 19.03597571966412 12.969788091045825 7 26.513113039344148 32.4824239730683 23.576265799405004 17.428197188182544 8 24.57674169727874 36.62539374075337 21.657579778316613 17.14028478365128 9 25.887963570938748 16.206395273212756 21.252447849263014 36.65319330658548 10-11 24.2120695915565 26.718438342450018 29.292889585251775 19.77660248074171 12-13 24.85715296552987 24.29952924647062 29.381692594569248 21.46162519343026 14-15 21.936122831299468 25.69369685810054 26.794616707736303 25.57556360286369 16-17 21.706453897708013 28.80856482236225 27.474105116819203 22.010876163110535 18-19 21.70153005981289 28.22872889428647 28.90603908666516 21.16370195923548 20-21 22.527185758073635 27.491591348193918 28.66992414002819 21.311298753704257 22-23 22.210754803355577 27.42678135601589 28.49908298550457 21.863380855123967 24-25 21.920926987530507 27.508787512638783 28.657066831357536 21.913218668473178 26-27 21.91003917451802 27.703601114763256 28.522030503622958 21.86432920709577 28-29 21.848704861404965 27.810449998709142 28.53626687916281 21.804578260723087 30-31 22.1151670456239 27.640108346395326 28.448490520850182 21.79623408713059 32-33 21.861006796579343 27.808262408985552 28.428200496036567 21.902530298398542 34-35 22.016578551185493 27.8195854065672 28.42584242141646 21.73799362083085 36-37 21.983204419344283 27.740674674514622 28.40827794692903 21.867842959212066 38-39 21.808421877007373 27.88949735257852 28.47462514417532 21.82745562623879 40-41 22.074627329160958 27.748913581267782 28.34129891816155 21.835160171409708 42-43 21.92482802869471 27.854475966307763 28.20627856874442 22.014417436253108 44-45 22.044310257313935 27.966959099868493 28.069940867942066 21.918789774875503 46-47 22.07467798264074 27.881532072292586 27.881414565201805 22.162375379864862 48-49 22.043002034087287 27.959724733586032 27.917855857738736 22.07941737458794 50-51 21.9930261591582 28.068774786354762 27.83649928929071 22.101699765196326 52-53 22.14432761962457 27.99106112667679 27.7020122715391 22.16259898215954 54-55 22.109020443810675 27.917004227422204 27.767592302086197 22.206383026680925 56-57 22.10596823224433 28.01630794684084 27.747848870482926 22.129874950431898 58-59 22.090417537524708 28.078070896164753 27.732350343163127 22.099161223147416 60-61 22.15696745344248 28.018116263486405 27.720765767692917 22.104150515378198 62-63 22.128590391876326 28.03261517566921 27.70151171676318 22.13728271569128 64-65 22.108034541101343 28.016422071914725 27.696211056306552 22.179332330677372 66-67 22.197100865209407 28.04003364316701 27.547332969106904 22.215532522516682 68-69 22.157393395403737 28.061462031058692 27.617874162093596 22.163270411443975 70-71 22.138480998452394 27.824395867395594 27.67952997543162 22.357593158720388 72-73 22.179752983436103 27.88691678773762 27.65891629371606 22.27441393511021 74-75 22.061915190548 28.013096906465545 27.632191940794275 22.292795962192173 76-77 22.201014421411617 27.940677984318697 27.515181964536982 22.3431256297327 78-79 22.14923556346298 28.010886755993585 27.485379809601152 22.354497870942282 80-81 22.181548004316227 27.958529953502172 27.50795023174335 22.351971810438258 82-83 22.22707017994803 27.925987628245025 27.584571748248642 22.262370443558304 84-85 22.308463147945208 27.912920802198975 27.533369737061726 22.245246312794087 86-87 22.147999424020178 27.931031561968457 27.617583280182913 22.303385733828453 88-89 22.21397256371002 27.92881091351971 27.568362992108607 22.28885353066167 90-91 22.23937204124886 27.913249127314554 27.608797066883966 22.23858176455262 92-93 22.269989814955558 27.91517212509972 27.57823572920872 22.236602330736005 94-95 22.139978749380358 28.004726170082616 27.618182408043836 22.23711267249319 96-97 22.164413744988877 28.016116386884686 27.636775890769794 22.182693977356646 98-99 22.41867017410636 28.579020547822065 27.69124882760482 21.31106045046676 100-101 26.43808911678034 35.63124051315748 28.31103931318847 9.619631056873711 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1427.0 1 1331.5 2 1905.0 3 2755.5 4 3812.0 5 6236.5 6 8295.0 7 9626.0 8 10328.0 9 9985.5 10 9009.0 11 8031.0 12 8634.0 13 11443.5 14 17605.0 15 25612.5 16 32014.0 17 35884.0 18 37215.0 19 36445.5 20 35169.0 21 34698.5 22 36194.5 23 41558.0 24 51334.0 25 65215.0 26 83393.0 27 103555.5 28 124219.5 29 145748.0 30 164599.5 31 182839.0 32 202443.0 33 220664.0 34 239347.0 35 257701.0 36 276953.5 37 294060.5 38 307491.5 39 320931.0 40 333563.5 41 344399.0 42 351421.0 43 357520.5 44 364637.0 45 370613.0 46 374233.0 47 376387.0 48 375202.0 49 369085.0 50 361827.0 51 351197.5 52 334883.5 53 319006.0 54 302493.5 55 281009.0 56 258571.5 57 235235.5 58 209445.0 59 182697.5 60 154964.5 61 127003.0 62 101542.5 63 79896.5 64 61187.0 65 46427.0 66 35132.5 67 26589.5 68 20134.5 69 14636.0 70 10480.0 71 7511.5 72 5340.5 73 3754.5 74 2655.0 75 1841.5 76 1216.5 77 802.5 78 557.0 79 392.0 80 276.5 81 189.0 82 127.0 83 80.5 84 57.5 85 53.0 86 46.0 87 35.5 88 22.0 89 10.0 90 6.0 91 4.5 92 2.5 93 1.5 94 0.5 95 0.0 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 2.54360578550073E-4 3 0.0049369075927673265 4 3.468553343864632E-5 5 0.0 6 0.0 7 0.0 8 5.434066905387923E-4 9 0.0025436057855007304 10-11 8.382337247672861E-4 12-13 3.1216980094781686E-4 14-15 9.249475583639018E-5 16-17 0.001537725315779987 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 6.146781904523544E-4 32-33 6.806131475146974E-4 34-35 2.3360924531949275E-5 36-37 7.460052008898021E-4 38-39 5.748017008204554E-4 40-41 3.5900315593691004E-5 42-43 1.0874688666725712E-4 44-45 9.039836237258565E-4 46-47 0.0 48-49 5.32202109574028E-4 50-51 1.900884823867814E-5 52-53 0.0 54-55 6.023593443972711E-4 56-57 7.863990192555697E-4 58-59 1.127788224192623E-4 60-61 1.4775825540484585E-4 62-63 7.475800663348181E-5 64-65 0.0 66-67 0.0 68-69 7.046781326254983E-6 70-71 4.4975902553924497E-4 72-73 0.0 74-75 7.3193239521070286E-6 76-77 0.0 78-79 2.853151448432366E-4 80-81 0.0 82-83 1.5428434512235442E-5 84-85 1.562838696448746E-5 86-87 2.849809573349467E-4 88-89 0.0 90-91 0.0 92-93 0.0 94-95 8.404768966768971E-6 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 232.0 20-21 540.0 22-23 1125.0 24-25 2753.0 26-27 4604.0 28-29 11532.0 30-31 25812.0 32-33 31714.0 34-35 43070.0 36-37 69204.0 38-39 82507.0 40-41 79459.0 42-43 86440.0 44-45 100044.0 46-47 100076.0 48-49 96428.0 50-51 88397.0 52-53 83671.0 54-55 88922.0 56-57 92783.0 58-59 92356.0 60-61 89194.0 62-63 84323.0 64-65 85509.0 66-67 90562.0 68-69 91362.0 70-71 90560.0 72-73 84038.0 74-75 85745.0 76-77 84900.0 78-79 88710.0 80-81 89730.0 82-83 83803.0 84-85 81932.0 86-87 85005.0 88-89 90407.0 90-91 96116.0 92-93 92465.0 94-95 100488.0 96-97 153003.0 98-99 682413.0 100-101 5037205.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 86.49380774800038 #Duplication Level Percentage of deduplicated Percentage of total 1 90.15148105415128 77.97544870495258 2 7.063654908194174 12.219248192551323 3 1.6635365627766585 4.316568349277209 4 0.5543809628537059 1.9180208168087909 5 0.24813820908854328 1.073120927591879 6 0.12415893545111467 0.644338745586306 7 0.061522968696600816 0.37249490785710254 8 0.04056150644982985 0.2806655312672688 9 0.023509038840048957 0.18300476571943217 >10 0.06783385230029454 0.8704818845371028 >50 8.858962792370471E-4 0.04919684436984704 >100 2.775628783639032E-4 0.046489563263277155 >500 1.9516191538675438E-5 0.00857519097211027 >1k 3.902584857861014E-5 0.04234557524572621 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 1.1561844479548774E-5 0.0 0.0 0.0 3 0.0 1.1561844479548774E-5 0.0 0.0 0.0 4 0.0 2.3123688959097548E-5 0.0 2.3123688959097548E-5 0.0 5 0.0 3.468553343864632E-5 0.0 3.468553343864632E-5 0.0 6 6.937106687729264E-5 3.468553343864632E-5 0.0 4.6247377918195096E-5 0.0 7 6.937106687729264E-5 3.468553343864632E-5 0.0 5.7809222397743865E-5 0.0 8 6.937106687729264E-5 4.6247377918195096E-5 0.0 5.7809222397743865E-5 0.0 9 6.937106687729264E-5 1.271802892750365E-4 0.0 8.093291135684141E-5 0.0 10-11 6.937106687729264E-5 1.271802892750365E-4 0.0 1.271802892750365E-4 0.0 12-13 6.937106687729264E-5 1.271802892750365E-4 0.0 1.4452305599435967E-4 0.0 14-15 6.937106687729264E-5 1.734276671932316E-4 0.0 1.5608490047390846E-4 0.0 16-17 1.271802892750365E-4 1.8498951167278039E-4 0.0 1.9077043391255475E-4 0.0 18-19 1.271802892750365E-4 2.0233227839210353E-4 0.0 2.485796563102986E-4 0.0 20-21 1.271802892750365E-4 2.196750451114267E-4 0.0 3.237316454273657E-4 0.0 22-23 1.271802892750365E-4 2.4279873407052424E-4 0.0 3.7575994558533516E-4 0.0 24-25 1.271802892750365E-4 2.659224230296218E-4 0.0 4.0466455678420706E-4 0.0 26-27 1.271802892750365E-4 2.7748426750917056E-4 0.0 4.855974681410485E-4 0.0 28-29 1.271802892750365E-4 2.7748426750917056E-4 0.0 9.191666361241275E-4 0.0 30-31 1.271802892750365E-4 3.2373164542736564E-4 0.0 0.0026476623858166693 5.780922239774387E-6 32-33 1.271802892750365E-4 3.2373164542736564E-4 0.0 0.005647961028259576 1.1561844479548774E-5 34-35 1.271802892750365E-4 3.410744121466888E-4 0.0 0.009365094028434506 1.1561844479548774E-5 36-37 1.271802892750365E-4 3.641981011057864E-4 0.0 0.01527319655748393 1.734276671932316E-5 38-39 1.271802892750365E-4 3.6997902334556077E-4 0.0 0.024037074672981898 2.3123688959097548E-5 40-41 1.271802892750365E-4 4.2778824574330463E-4 0.0 0.03382995694715971 2.3123688959097548E-5 42-43 1.271802892750365E-4 4.451310124626278E-4 0.0 0.04247821661786219 2.3123688959097548E-5 44-45 1.271802892750365E-4 4.8559746814104843E-4 0.0 0.052484993014911656 2.3123688959097548E-5 46-47 1.271802892750365E-4 5.202830015796948E-4 0.0 0.06304673794697946 2.3123688959097548E-5 48-49 1.271802892750365E-4 5.202830015796948E-4 0.0 0.07402470928031102 2.3123688959097548E-5 50-51 1.329612115148109E-4 5.838731462172131E-4 0.0 0.08400258106616162 2.3123688959097548E-5 52-53 1.3874213375458528E-4 5.896540684569875E-4 0.0 0.09356422645074845 2.3123688959097548E-5 54-55 1.3874213375458528E-4 5.896540684569875E-4 0.0 0.1033282041137274 2.3123688959097548E-5 56-57 1.3874213375458528E-4 5.896540684569875E-4 0.0 0.11265283168648348 2.3123688959097548E-5 58-59 1.3874213375458528E-4 5.954349906967619E-4 0.0 0.1207056563664892 2.3123688959097548E-5 60-61 1.5030397823413406E-4 6.301205241354081E-4 0.0 0.12863708167945964 2.3123688959097548E-5 62-63 1.6186582271368282E-4 6.359014463751825E-4 0.0 0.13622165165804365 2.3123688959097548E-5 64-65 1.734276671932316E-4 7.052725132524752E-4 0.0 0.14340155707984342 2.3123688959097548E-5 66-67 1.734276671932316E-4 7.515198911706703E-4 0.0 0.15044850129012843 2.3123688959097548E-5 68-69 1.734276671932316E-4 7.977672690888653E-4 0.0 0.1577440251567237 2.3123688959097548E-5 70-71 1.734276671932316E-4 8.324528025275117E-4 0.0 0.16445567587710175 2.3123688959097548E-5 72-73 1.8498951167278039E-4 8.382337247672861E-4 0.0 0.17001692307176472 2.3123688959097548E-5 74-75 1.8498951167278039E-4 8.440146470070605E-4 0.0 0.17453760426326828 2.3123688959097548E-5 76-77 1.8498951167278039E-4 8.613574137263837E-4 0.0 0.1787808011872627 2.3123688959097548E-5 78-79 1.8498951167278039E-4 8.787001804457068E-4 0.0 0.18266558093239108 2.3123688959097548E-5 80-81 1.8498951167278039E-4 8.787001804457068E-4 0.0 0.18441141944880293 2.3123688959097548E-5 82-83 1.8498951167278039E-4 8.787001804457068E-4 0.0 0.1849374833726224 2.3123688959097548E-5 84-85 1.8498951167278039E-4 8.787001804457068E-4 0.0 0.1854751091409214 2.3123688959097548E-5 86-87 1.9655135615232914E-4 8.902620249252556E-4 0.0 0.18578727894186925 2.3123688959097548E-5 88-89 2.0811320063187792E-4 9.133857138843531E-4 0.0 0.18593758292010337 2.3123688959097548E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8785 0.0 44.398624 1 GTATCAA 14845 0.0 33.693577 1 TCAACGC 17445 0.0 27.746227 4 ATCAACG 17605 0.0 27.471172 3 CAACGCA 17925 0.0 26.933931 5 TATCAAC 18940 0.0 25.927767 2 AACGCAG 18675 0.0 25.896591 6 TACATGG 26175 0.0 21.877407 2 GTACATG 26925 0.0 21.837002 1 ACGCAGA 22270 0.0 21.75347 7 CGCAGAG 22520 0.0 21.475206 8 ACATGGG 26680 0.0 20.951656 3 CATGGGG 18920 0.0 19.105284 4 GCAGAGT 27680 0.0 17.561634 9 GAGTACT 14300 0.0 17.213678 12-13 GAGTACA 18880 0.0 16.755281 1 AGAGTAC 24435 0.0 16.394342 10-11 CAGAGTA 26615 0.0 16.2494 10-11 AGTACAT 19865 0.0 15.278327 2 GTGGTAT 5045 0.0 15.101394 1 >>END_MODULE