##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139922_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 15053027 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.793960377537356 31.0 31.0 34.0 30.0 34.0 2 31.97371990364463 31.0 31.0 34.0 30.0 34.0 3 32.000631168734365 31.0 31.0 34.0 30.0 34.0 4 35.73367795062083 37.0 35.0 37.0 35.0 37.0 5 35.54530746540214 37.0 35.0 37.0 33.0 37.0 6 35.55573646416764 37.0 35.0 37.0 33.0 37.0 7 35.4404897433586 37.0 35.0 37.0 33.0 37.0 8 35.410563602921854 37.0 35.0 37.0 33.0 37.0 9 36.98433464578254 39.0 37.0 39.0 33.0 39.0 10-11 36.82105868142003 39.0 37.0 39.0 32.5 39.0 12-13 36.77998265730872 39.0 37.0 39.0 32.0 39.0 14-15 37.91172855134054 40.0 37.0 41.0 33.0 41.0 16-17 37.9219034816054 40.0 37.0 41.0 33.0 41.0 18-19 37.89132810297889 40.0 37.0 41.0 32.5 41.0 20-21 37.85156264773248 40.0 37.0 41.0 32.0 41.0 22-23 37.77029532594939 39.5 37.0 41.0 32.0 41.0 24-25 37.6724998440401 39.0 37.0 41.0 32.0 41.0 26-27 37.50881811259471 39.0 36.0 41.0 32.0 41.0 28-29 37.365090201891974 39.0 36.0 40.5 32.0 41.0 30-31 37.2309718717335 39.0 36.0 40.0 31.0 41.0 32-33 37.408938280797 39.0 36.0 40.5 32.0 41.0 34-35 37.3813930586667 39.0 36.0 41.0 31.5 41.0 36-37 37.27328167755785 39.0 36.0 40.5 31.0 41.0 38-39 37.1082483628402 39.0 36.0 40.0 31.0 41.0 40-41 37.07736583372757 39.0 36.0 40.0 31.0 41.0 42-43 36.94869229850404 39.0 35.0 40.0 31.0 41.0 44-45 36.99386869631819 39.0 35.5 40.0 31.0 41.0 46-47 37.13872357299636 39.0 36.0 40.0 31.0 41.0 48-49 37.06495075741258 39.0 35.5 40.0 31.0 41.0 50-51 36.93959873863136 39.0 35.0 40.0 31.0 41.0 52-53 36.78095809201814 39.0 35.0 40.0 30.0 41.0 54-55 36.6282760499538 38.5 35.0 40.0 30.0 41.0 56-57 36.444264380633435 38.0 35.0 40.0 30.0 41.0 58-59 36.27483840872222 38.0 34.5 40.0 30.0 41.0 60-61 36.05425466301713 38.0 34.0 40.0 29.0 41.0 62-63 35.77695274787499 37.5 34.0 40.0 29.0 41.0 64-65 35.5271300006135 37.0 34.0 40.0 29.0 41.0 66-67 35.232902773492825 36.5 34.0 39.0 28.0 41.0 68-69 34.893644709921745 36.0 33.0 39.0 28.0 40.0 70-71 34.532904421064224 35.5 33.0 38.5 28.0 40.0 72-73 34.24028621340197 35.0 33.0 38.0 28.0 40.0 74-75 33.87985207362654 35.0 32.0 37.0 27.5 39.0 76-77 32.819406090431045 34.0 31.0 36.0 26.0 39.0 78-79 33.179351635870674 34.5 32.0 36.0 26.5 39.0 80-81 33.06541739598474 34.0 32.0 36.0 27.0 37.5 82-83 32.64760085749968 34.0 31.5 35.5 26.0 37.0 84-85 32.4126320042915 34.0 31.0 35.0 26.0 37.0 86-87 32.32601889582941 34.0 31.0 35.0 26.0 36.0 88-89 32.1739456944795 34.0 31.0 35.0 26.0 36.0 90-91 32.052263207136164 34.0 31.0 35.0 26.0 35.5 92-93 31.97427244926548 34.0 31.0 35.0 26.0 35.0 94-95 31.92652916594181 34.0 31.0 35.0 26.0 35.0 96-97 31.83560067478811 34.0 31.0 35.0 26.0 35.0 98-99 32.05406986359388 34.0 31.0 35.0 26.5 35.0 100-101 31.142200640312993 33.0 29.0 34.5 25.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 0.0 15 0.0 16 0.0 17 0.0 18 9.0 19 45.0 20 174.0 21 916.0 22 3809.0 23 12525.0 24 32311.0 25 66609.0 26 117966.0 27 183896.0 28 262160.0 29 350760.0 30 449133.0 31 562129.0 32 703190.0 33 890030.0 34 1153781.0 35 1524473.0 36 2112786.0 37 2805153.0 38 2531761.0 39 1253504.0 40 35905.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 39.09028396747046 21.558906391385598 14.233761754363425 25.117047886780515 2 15.22499321391146 22.611532670150126 38.63751020238421 23.5259639135542 3 17.787167842532124 26.278842539699326 31.133640505237953 24.800349112530597 4 12.962505936515209 18.19037279090054 37.684138262460635 31.16298301012361 5 13.069922747099305 37.875159594146744 35.827644499674385 13.227273159079566 6 31.11447285652248 37.6998128017707 17.858022841518853 13.327691500187969 7 26.56774614168964 32.429603693662415 23.27864687946152 17.72400328518643 8 25.04263760371917 36.3959155856161 21.06109953831877 17.500347272345955 9 25.791643102746047 15.644979577861648 20.871582838455016 37.69179448093729 10-11 24.596315412175905 26.390203777618947 28.972352205307278 20.041128604897875 12-13 24.89943384808916 24.046296469142053 29.099346596535035 21.95492308623375 14-15 22.19106163830039 25.498516012759424 26.25506484509727 26.055357503842913 16-17 22.117711295404476 28.423174354399695 27.129708389369373 22.329405960826456 18-19 22.180923611491483 27.784200894801632 28.529505757171897 21.505369736534984 20-21 22.791126785135113 27.06607037818071 28.324353042361455 21.818449794322724 22-23 22.600582444524814 26.935893162114038 28.195174131696994 22.268350261664153 24-25 22.38222441102859 27.080982457259704 28.25538119874035 22.28141193297135 26-27 22.36517598008059 27.175839649464763 28.21950488586613 22.239479484588514 28-29 22.313505102953197 27.270422989474756 28.220923199170585 22.195148708401458 30-31 22.531046243073657 27.14124345964599 28.083454918839657 22.244255378440698 32-33 22.332722770941615 27.324918651579495 28.03926628607397 22.30309229140492 34-35 22.452535783536955 27.299578440454475 28.071496208605158 22.176389567403408 36-37 22.441906668687835 27.25604517760507 28.0438848781073 22.258163275599788 38-39 22.31901733004982 27.34800852439515 28.08978306787651 22.243191077678517 40-41 22.510064789351567 27.218233029110216 27.956970163999838 22.31473201753838 42-43 22.41575126945861 27.371646034781737 27.73089373440685 22.48170896135281 44-45 22.476213654997224 27.380733100344212 27.63125978440223 22.511793460256335 46-47 22.55566324572375 27.337892939123414 27.481739910760165 22.62470390439267 48-49 22.47158581383629 27.497362520709 27.41927987527174 22.61177179018297 50-51 22.480276215137817 27.60091542508248 27.34992487451857 22.568883485261136 52-53 22.655799591673105 27.4428637621419 27.200570905162262 22.700765741022728 54-55 22.542007992236922 27.314964518781558 27.31760079564048 22.82542669334104 56-57 22.503466046269967 27.39483752256191 27.368370825132043 22.733325606036082 58-59 22.52921066506528 27.405354919635982 27.295551847254586 22.769882568044153 60-61 22.590615143512807 27.336838459967773 27.392536557761808 22.680009838757606 62-63 22.553041120372622 27.464671421798354 27.304714251645194 22.677573206183833 64-65 22.457751542591787 27.459573843491647 27.303538054105736 22.779136559810837 66-67 22.510940961031892 27.53559393898125 27.111989206907456 22.8414758930794 68-69 22.458994854844427 27.582186667883356 27.12044496998624 22.83837350728598 70-71 22.434165082803347 27.350751627656745 27.216368135644505 22.998715153895407 72-73 22.480456934003477 27.34016586573918 27.120986952768078 23.058390247489267 74-75 22.367462279653523 27.383587495127266 27.134431961177725 23.11451826404149 76-77 22.61340021774734 27.272624719713413 27.06803683282467 23.045938229714576 78-79 22.55394568185183 27.2752282779901 27.003244588289594 23.167581451868475 80-81 22.581766455328136 27.34256147985138 26.951018653300185 23.1246534115203 82-83 22.492041012606734 27.307750562099177 27.017330840568494 23.1828775847256 84-85 22.586052051204284 27.31617830141378 27.036921227103157 23.06084842027878 86-87 22.500427648562937 27.31043361870374 27.122359266963592 23.066779465769734 88-89 22.46207051956368 27.214513987232163 27.201233271520813 23.122182221683342 90-91 22.446795529274414 27.154235436837688 27.29470228231097 23.104266751576937 92-93 22.406265125123486 27.034774146923173 27.430163676404813 23.12879705154853 94-95 22.252877096255194 27.116818642982597 27.52822370036573 23.10208056039648 96-97 22.10621873057372 27.159320615509415 27.619017878573597 23.11544277534327 98-99 22.190173787920905 27.84061463573339 27.70782884404803 22.261382732297673 100-101 25.28903171404403 35.61309410358226 28.868913505412912 10.2289606769608 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3644.0 1 3300.0 2 4158.0 3 5744.0 4 7485.5 5 11012.0 6 14192.0 7 17223.0 8 19509.0 9 19743.5 10 18698.0 11 17544.0 12 19145.5 13 24614.0 14 37487.5 15 54962.0 16 68114.0 17 74101.0 18 75350.5 19 74344.0 20 72079.5 21 70789.0 22 72704.0 23 80638.5 24 95477.5 25 117223.0 26 144398.5 27 172461.5 28 202112.0 29 233037.5 30 262072.0 31 291850.0 32 323974.5 33 355308.5 34 385001.0 35 415330.5 36 450056.5 37 483152.5 38 510051.0 39 533806.0 40 557414.0 41 581538.0 42 601534.0 43 620581.5 44 638906.0 45 654176.0 46 665398.5 47 672395.0 48 675812.5 49 674164.0 50 668500.0 51 658709.0 52 640877.5 53 616956.5 54 589149.0 55 554711.5 56 516353.0 57 473390.5 58 425112.5 59 373638.0 60 320572.0 61 267532.5 62 217930.5 63 172408.0 64 131574.5 65 100049.0 66 75928.5 67 57962.0 68 44802.0 69 33188.0 70 24161.0 71 17935.5 72 12964.5 73 9107.0 74 6319.0 75 4420.0 76 3076.0 77 2094.0 78 1479.0 79 1045.0 80 737.0 81 518.5 82 360.0 83 245.5 84 179.0 85 128.5 86 92.0 87 72.5 88 45.0 89 25.5 90 19.0 91 15.0 92 12.5 93 9.0 94 5.0 95 3.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0011492705088484861 3 6.643182132072174E-6 4 2.6572728528288697E-5 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0014282841583955173 18-19 0.0012854557425559657 20-21 2.325237553742468E-5 22-23 0.0024650527282087348 24-25 1.4621559642554707E-4 26-27 0.0011569475866173079 28-29 4.7567195732524E-4 30-31 1.4659873769824188E-4 32-33 8.959604386662424E-4 34-35 0.015759922922520642 36-37 0.03356956788724307 38-39 0.007699950068233245 40-41 0.004564415923942053 42-43 0.007380850672717055 44-45 0.005228097323118664 46-47 0.0030730064848693743 48-49 0.0013731750294422203 50-51 2.0675848441748068E-4 52-53 1.1968020103880171E-4 54-55 0.004586759831043615 56-57 0.012027473191910838 58-59 0.009875182217376688 60-61 0.008189062427121795 62-63 0.0018879096618356131 64-65 0.0013054145413226117 66-67 0.0012697399435662837 68-69 0.0 70-71 0.0 72-73 7.493165116012381E-4 74-75 8.926386854788484E-4 76-77 8.187693596309316E-5 78-79 8.768202951701861E-4 80-81 0.002610375289533731 82-83 0.0050581405423468975 84-85 0.012895493741902922 86-87 0.008610378889029558 88-89 0.07655687178469556 90-91 0.0 92-93 5.479496491259217E-6 94-95 1.758041238089767E-4 96-97 0.008655085750351116 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 511.0 20-21 1513.0 22-23 3008.0 24-25 6462.0 26-27 7892.0 28-29 16340.0 30-31 46396.0 32-33 66802.0 34-35 95796.0 36-37 139266.0 38-39 149476.0 40-41 157151.0 42-43 177145.0 44-45 205274.0 46-47 204391.0 48-49 188250.0 50-51 177273.0 52-53 163803.0 54-55 182772.0 56-57 185849.0 58-59 189163.0 60-61 195604.0 62-63 186745.0 64-65 202985.0 66-67 214260.0 68-69 214739.0 70-71 212189.0 72-73 207162.0 74-75 210566.0 76-77 211215.0 78-79 222913.0 80-81 224930.0 82-83 218701.0 84-85 220224.0 86-87 232424.0 88-89 248427.0 90-91 270323.0 92-93 293496.0 94-95 376291.0 96-97 452309.0 98-99 1219363.0 100-101 6853628.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 86.99335786947572 #Duplication Level Percentage of deduplicated Percentage of total 1 91.37794661482097 79.49274411240968 2 6.060387477155698 10.544269132557895 3 1.4154787662927657 3.6941175261825165 4 0.5165559600958887 1.7974774998492906 5 0.2391039592312698 1.0400228146707193 6 0.11997012992387864 0.6261962667669283 7 0.07686860645504666 0.4680940733190236 8 0.048155842010661525 0.3351390718031529 9 0.033872367172869754 0.2652003863420166 >10 0.10835510853161462 1.4928863960251975 >50 0.002712811540325883 0.1540520953799866 >100 5.672734786624959E-4 0.07433073228732573 >500 2.5083290362331096E-5 0.015469892406353393 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 6.643182132072174E-6 0.0 3 0.0 0.0 0.0 6.643182132072174E-6 0.0 4 0.0 1.9929546396216522E-5 0.0 1.3286364264144348E-5 0.0 5 0.0 3.321591066036087E-5 0.0 1.9929546396216522E-5 0.0 6 0.0 3.321591066036087E-5 0.0 1.9929546396216522E-5 6.643182132072174E-6 7 0.0 3.321591066036087E-5 0.0 2.6572728528288697E-5 6.643182132072174E-6 8 0.0 4.6502274924505216E-5 0.0 2.6572728528288697E-5 1.9929546396216522E-5 9 0.0 1.0629091411315479E-4 0.0 2.6572728528288697E-5 1.9929546396216522E-5 10-11 0.0 1.0629091411315479E-4 0.0 3.321591066036087E-5 1.9929546396216522E-5 12-13 0.0 1.0961250517919087E-4 0.0 3.9859092792433045E-5 1.9929546396216522E-5 14-15 0.0 1.5943637116973218E-4 0.0 3.9859092792433045E-5 2.9894319594324782E-5 16-17 1.3286364264144348E-5 1.5943637116973218E-4 0.0 6.643182132072173E-5 3.9859092792433045E-5 18-19 1.3286364264144348E-5 1.6607955330180435E-4 0.0 1.1957727837729913E-4 3.9859092792433045E-5 20-21 1.3286364264144348E-5 1.7272273543387652E-4 0.0 2.7901364954703134E-4 3.9859092792433045E-5 22-23 1.6607955330180434E-5 2.059386460942374E-4 0.0 6.942125328015422E-4 4.982386599054131E-5 24-25 2.325113746225261E-5 2.3915455675459826E-4 0.0 0.0017272273543387652 5.9788639188649564E-5 26-27 2.6572728528288697E-5 2.590841031508148E-4 0.0 0.005337796843119992 5.9788639188649564E-5 28-29 2.6572728528288697E-5 2.590841031508148E-4 0.0 0.03060846167352254 5.9788639188649564E-5 30-31 2.6572728528288697E-5 3.1555115127342826E-4 0.0 0.044851444164685283 6.311023025468565E-5 32-33 2.6572728528288697E-5 3.255159244715365E-4 0.0 0.05132190356132358 6.643182132072173E-5 34-35 2.6572728528288697E-5 3.9526933685829436E-4 0.0 0.06106413015800742 7.307500345279392E-5 36-37 2.6572728528288697E-5 4.6834434031108827E-4 0.0 0.07594817972491513 7.307500345279392E-5 38-39 2.6572728528288697E-5 4.783091135091965E-4 0.0 0.10268698780650563 7.307500345279392E-5 40-41 2.6572728528288697E-5 5.181682063016296E-4 0.0 0.15577597781496041 7.307500345279392E-5 42-43 2.6572728528288697E-5 5.281329794997378E-4 0.0 0.1785189118441095 7.639659451883E-5 44-45 2.9894319594324782E-5 5.77956845490279E-4 0.0 0.21313985552540363 8.303977665090218E-5 46-47 3.321591066036087E-5 6.178159382827121E-4 0.0 0.2536267290293175 8.968295878297435E-5 48-49 3.321591066036087E-5 6.244591204147843E-4 0.0 0.2876929670025836 9.96477319810826E-5 50-51 3.321591066036087E-5 7.141420791977587E-4 0.0 0.32514058468107443 9.96477319810826E-5 52-53 3.321591066036087E-5 7.174636702637948E-4 0.0 0.36901548107234516 1.0961250517919086E-4 54-55 3.321591066036087E-5 7.274284434619031E-4 0.0 0.4939239131106322 1.1957727837729913E-4 56-57 3.653750172639695E-5 7.440363987920835E-4 0.0 0.5978066737009108 1.1957727837729913E-4 58-59 3.9859092792433045E-5 7.440363987920835E-4 0.0 0.7075487209316771 1.1957727837729913E-4 60-61 4.6502274924505216E-5 7.639659451882999E-4 0.0 0.7692705261207596 1.1957727837729913E-4 62-63 4.6502274924505216E-5 7.739307183864082E-4 0.0 0.7975870899587173 1.262204605093713E-4 64-65 4.6502274924505216E-5 8.4036253970713E-4 0.0 0.8261095924427692 1.262204605093713E-4 66-67 4.982386599054131E-5 8.436841307731661E-4 0.0 0.8402462840198188 1.2954205157540737E-4 68-69 5.314545705657739E-5 8.503273129052383E-4 0.0 0.8518319936581527 1.3286364264144347E-4 70-71 5.314545705657739E-5 8.569704950373104E-4 0.0 0.8628032089492699 1.3286364264144347E-4 72-73 5.9788639188649564E-5 8.569704950373104E-4 0.0 0.8719076900612748 1.5943637116973218E-4 74-75 5.9788639188649564E-5 8.868648146316352E-4 0.0 0.8807530870701288 1.5943637116973218E-4 76-77 6.643182132072173E-5 9.532966359523569E-4 0.0 0.8891234965565398 1.6275796223576825E-4 78-79 6.643182132072173E-5 9.765477734146096E-4 0.0 0.8969989889741112 1.6607955330180435E-4 80-81 6.643182132072173E-5 9.765477734146096E-4 0.0 0.9020079483016937 1.6607955330180435E-4 82-83 6.643182132072173E-5 9.831909555466818E-4 0.0 0.9054524382371731 1.6607955330180435E-4 84-85 6.643182132072173E-5 9.831909555466818E-4 0.0 0.9086677383890962 1.6607955330180435E-4 86-87 7.307500345279392E-5 9.831909555466818E-4 0.0 0.909122796365143 1.6607955330180435E-4 88-89 7.307500345279392E-5 9.96477319810826E-4 0.0 0.9092257656881901 1.7272273543387652E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 15000 0.0 44.7519 1 GTATCAA 25230 0.0 31.259703 1 TCAACGC 30965 0.0 24.721891 4 ATCAACG 31560 0.0 24.281116 3 CAACGCA 32010 0.0 23.927296 5 TATCAAC 33265 0.0 23.348934 2 AACGCAG 33025 0.0 23.046804 6 GTACATG 38265 0.0 20.214495 1 ACGCAGA 39160 0.0 19.425983 7 TACATGG 38935 0.0 19.425615 2 CGCAGAG 40030 0.0 18.973856 8 ACATGGG 39755 0.0 18.512465 3 GTGGTAT 7620 0.0 17.398752 1 CATGGGG 30835 0.0 16.317636 4 GAGTACT 26540 0.0 15.972312 12-13 AGAGTAC 42450 0.0 15.959281 10-11 GCAGAGT 48120 0.0 15.634571 9 TGGTATC 7675 0.0 15.296917 2 CAGAGTA 46455 0.0 15.159336 10-11 GTACTTT 30340 0.0 13.986009 14-15 >>END_MODULE