##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139884_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13632109 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27258122716008 33.0 31.0 34.0 30.0 34.0 2 32.44063842212529 34.0 31.0 34.0 31.0 34.0 3 32.55584994222097 34.0 31.0 34.0 31.0 34.0 4 36.09713662060654 37.0 35.0 37.0 35.0 37.0 5 35.92806659629849 37.0 35.0 37.0 35.0 37.0 6 35.96811029019794 37.0 35.0 37.0 35.0 37.0 7 35.939107881253 37.0 35.0 37.0 35.0 37.0 8 35.91960429600438 37.0 35.0 37.0 35.0 37.0 9 37.73953377280067 39.0 37.0 39.0 35.0 39.0 10-11 37.60856900425312 39.0 37.0 39.0 35.0 39.0 12-13 37.62429034274887 39.0 37.0 39.0 35.0 39.0 14-15 38.91374339069618 40.0 38.0 41.0 36.0 41.0 16-17 38.858855551991255 40.0 38.0 41.0 36.0 41.0 18-19 38.9188695234171 40.0 38.0 41.0 36.0 41.0 20-21 38.913352898768125 40.0 38.0 41.0 35.5 41.0 22-23 38.873818868340976 40.0 38.0 41.0 35.0 41.0 24-25 38.855225152230304 40.0 38.0 41.0 35.0 41.0 26-27 38.750456807944516 40.0 38.0 41.0 35.0 41.0 28-29 38.666133326465385 40.0 38.0 41.0 35.0 41.0 30-31 38.51669674260711 40.0 38.0 41.0 34.0 41.0 32-33 38.42738837189463 40.0 38.0 41.0 34.0 41.0 34-35 38.380095417203854 40.0 38.0 41.0 34.0 41.0 36-37 38.278400035534816 40.0 38.0 41.0 34.0 41.0 38-39 38.23870221577001 40.0 38.0 41.0 34.0 41.0 40-41 38.23466248715518 40.0 38.0 41.0 34.0 41.0 42-43 38.19534614579464 40.0 38.0 41.0 34.0 41.0 44-45 38.083580571092 40.0 38.0 41.0 33.0 41.0 46-47 38.022173666581054 40.0 37.0 41.0 33.0 41.0 48-49 37.99303281789976 40.0 37.0 41.0 33.0 41.0 50-51 37.90550928864183 40.0 37.0 41.0 33.0 41.0 52-53 37.762509019500186 39.5 37.0 41.0 33.0 41.0 54-55 37.57720755857831 39.0 36.5 41.0 32.5 41.0 56-57 37.44559580659056 39.0 36.0 40.5 32.0 41.0 58-59 37.2165732415604 39.0 35.5 40.0 32.0 41.0 60-61 37.042691625361996 39.0 35.0 40.0 31.5 41.0 62-63 36.821357724079306 38.5 35.0 40.0 31.0 41.0 64-65 36.50283554442409 38.0 35.0 40.0 31.0 41.0 66-67 36.42609198095613 37.5 35.0 40.0 31.0 41.0 68-69 36.187534793682346 37.0 35.0 40.0 31.0 41.0 70-71 35.87747314342629 36.5 34.0 39.0 31.0 41.0 72-73 35.56713540340111 36.0 34.0 39.0 30.5 40.5 74-75 35.16921147586336 35.5 34.0 38.5 30.0 40.0 76-77 33.11715017283204 34.5 31.0 36.0 27.5 39.0 78-79 34.34836412433393 35.0 33.5 37.0 29.5 39.0 80-81 34.38244408813696 35.0 34.0 37.0 30.0 39.0 82-83 34.10851412741421 35.0 34.0 36.0 30.0 38.5 84-85 33.86056688109668 35.0 33.0 36.0 29.5 37.0 86-87 33.66388271075543 35.0 33.0 35.5 29.0 37.0 88-89 33.438045397638916 35.0 33.0 35.0 29.0 36.5 90-91 33.2874379246165 35.0 33.0 35.0 29.0 36.0 92-93 33.22798196211875 35.0 33.0 35.0 29.0 36.0 94-95 33.206280769551 35.0 33.0 35.0 29.0 36.0 96-97 33.253298170417274 35.0 33.0 35.0 29.0 35.0 98-99 33.29246468286017 35.0 33.0 35.0 29.5 35.0 100-101 32.03812116694727 33.5 31.0 34.5 27.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 0.0 16 0.0 17 1.0 18 0.0 19 22.0 20 90.0 21 350.0 22 1382.0 23 4765.0 24 12148.0 25 26628.0 26 48195.0 27 78370.0 28 117022.0 29 161789.0 30 215488.0 31 281361.0 32 369047.0 33 500885.0 34 725224.0 35 1109956.0 36 1928135.0 37 3263434.0 38 3431912.0 39 1335871.0 40 20033.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.8445524459935 20.31372401731823 13.509061583941268 24.332661952747003 2 14.942207811262067 21.71337187124035 40.43102790574841 22.91339241174917 3 18.085598104063344 26.44920984667 30.72082579200374 24.74436625726291 4 12.43480001646115 18.064506143112098 38.98991475779552 30.510779082631235 5 12.882662867008642 38.112150552842024 35.99000565136534 13.015180928783995 6 29.818680293709505 38.341836908727764 18.804346414777054 13.035136382785673 7 26.109005175649692 32.728936580227334 23.677898607735195 17.484159636387776 8 24.579927327123162 36.48274074192531 21.6164176676047 17.320914263346822 9 25.778512319094137 16.116068775954385 21.10217142052319 37.003247484428286 10-11 24.10539740372366 26.609541941097042 29.444490230980914 19.840570424198383 12-13 24.894740006081978 24.236872608971552 29.329298536536452 21.53908884841002 14-15 22.002187776094498 25.5947062625971 26.75089942069121 25.652206540617193 16-17 21.76372450088923 28.65816747657211 27.404573371388768 22.173534651149893 18-19 21.80223177499534 27.9590267360685 28.94982720575371 21.288914283182446 20-21 22.570140375200236 27.240206184546032 28.713011105210185 21.476642335043543 22-23 22.2445193240673 27.239592257600087 28.58980619055831 21.926082227774305 24-25 21.988464844347096 27.31592693471907 28.736184535485656 21.959423685448183 26-27 22.003173453985468 27.515350265909277 28.577559522267 21.903916757838253 28-29 21.940287766903598 27.59580508938887 28.583433215918262 21.88047392778927 30-31 22.22006399020958 27.447263085640948 28.4602482302058 21.87242469394367 32-33 21.91552254219155 27.601207382760123 28.511139242851115 21.972130832197212 34-35 22.026264883716184 27.610436728751292 28.465231847126066 21.898066540406457 36-37 22.094572359266447 27.525429832137217 28.460771249737103 21.919226558859236 38-39 21.926669706266665 27.67074086367034 28.497416771441326 21.90517265862167 40-41 22.175002048001367 27.517585851933568 28.384867606407628 21.92254449365744 42-43 22.10492883686023 27.612616908527244 28.208006944168183 22.074447310444345 44-45 22.185496848976353 27.76075525174467 27.998546298741395 22.05520160053759 46-47 22.279768769513776 27.65651839284245 27.768355109907816 22.295357727735954 48-49 22.162323629079086 27.778652642354846 27.804628613929268 22.2543951146368 50-51 22.12543582540451 27.897283960007265 27.731080990013 22.24619922457522 52-53 22.33202932299769 27.77506092140072 27.63520425894011 22.25770549666148 54-55 22.26202615072008 27.701226793235733 27.67470413592327 22.36204292012091 56-57 22.31136794426183 27.8872031920613 27.553310833378074 22.248118030298798 58-59 22.259635204001917 27.970198339630613 27.56674889808067 22.2034175582868 60-61 22.349837604153024 27.9519329100188 27.511132401408684 22.187097084419495 62-63 22.295117291661022 27.998230109026707 27.50127975513626 22.205372844176015 64-65 22.27970129076677 27.925453936287465 27.482098432146866 22.3127463407989 66-67 22.34401752603047 27.952625393030427 27.352241900350073 22.35111518058903 68-69 22.316127064916483 27.904120467871458 27.447820556178538 22.33193191103352 70-71 22.309268407553322 27.64757073327409 27.519942380692342 22.523218478480246 72-73 22.390759154993116 27.70090995149519 27.462244254790804 22.446086638720892 74-75 22.20801310589763 27.826066724120917 27.470036000419828 22.495884169561624 76-77 22.347409490745505 27.743246133711878 27.400859956923874 22.508484418618746 78-79 22.314695400581854 27.786234966159846 27.38839552122507 22.51067411203323 80-81 22.328129955588288 27.73403390791246 27.401871519339387 22.535964617159866 82-83 22.347255518122413 27.671895823354347 27.520719814578037 22.460128843945203 84-85 22.519759366969936 27.60140852840991 27.44189378742402 22.436938317196137 86-87 22.261248488434926 27.647341440291246 27.5286465464322 22.562763524841625 88-89 22.412239291008998 27.59774234931814 27.480933635182502 22.509084724490364 90-91 22.445855334735157 27.582250714072636 27.5304042509937 22.441489700198503 92-93 22.462948368680827 27.51231379303838 27.54984194710481 22.474895891175986 94-95 22.34261832252784 27.506539312809952 27.63186431931832 22.518978045343882 96-97 22.313649243256712 27.541457289488168 27.637859433433814 22.507034033821302 98-99 22.555354681447547 28.16336948315229 27.674427981715038 21.606847853685128 100-101 26.728413812043307 35.089607754947174 28.341092391104933 9.840886041904586 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2224.0 1 2036.0 2 3120.0 3 4681.5 4 6405.5 5 10717.5 6 14492.0 7 17005.0 8 18697.5 9 18387.5 10 16655.0 11 14894.5 12 15966.5 13 21022.0 14 32649.0 15 48569.5 16 61805.5 17 69901.0 18 72475.0 19 70123.5 20 66182.0 21 63632.0 22 64108.5 23 70296.0 24 83458.0 25 104938.5 26 133804.5 27 164077.0 28 194552.5 29 227237.5 30 256385.0 31 283201.5 32 312935.5 33 342118.5 34 369609.5 35 394861.0 36 424070.0 37 450154.5 38 467002.5 39 482263.5 40 500591.5 41 517516.5 42 529075.0 43 541873.5 44 554089.0 45 564078.0 46 570408.0 47 574838.0 48 579118.5 49 576180.0 50 565486.0 51 552096.0 52 533431.0 53 511595.5 54 486468.5 55 452124.5 56 416562.5 57 380001.5 58 339076.0 59 296286.5 60 250944.5 61 206997.0 62 165835.5 63 129090.0 64 98293.0 65 74245.0 66 56987.5 67 44594.0 68 34536.0 69 25182.5 70 18085.5 71 13250.5 72 9557.5 73 6874.5 74 4927.0 75 3476.0 76 2421.5 77 1580.0 78 1055.5 79 774.5 80 559.0 81 379.0 82 269.5 83 185.5 84 132.5 85 105.5 86 83.5 87 63.5 88 41.5 89 25.0 90 14.0 91 9.5 92 8.0 93 4.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.5 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0037338316470327516 3 5.868497677065229E-5 4 8.802746515597844E-5 5 3.667811048165768E-5 6 0.0 7 2.9342488385326146E-5 8 4.6214419206888684E-4 9 1.393768198302992E-4 10-11 6.235278781881806E-5 12-13 2.2373647393811183E-4 14-15 7.3356220963315365E-6 16-17 4.768154362615499E-4 18-19 0.0 20-21 4.768339050327325E-5 22-23 0.0 24-25 0.0 26-27 7.341194725116673E-5 28-29 0.0 30-31 1.0670542796529969E-4 32-33 4.391080718764564E-4 34-35 0.0 36-37 3.68583354716132E-4 38-39 0.0011142324626563303 40-41 0.0 42-43 0.0 44-45 3.1253167518174006E-4 46-47 0.0 48-49 1.1852152925800742E-5 50-51 1.3182451520535863E-4 52-53 5.973639941435725E-4 54-55 0.003283610898390231 56-57 0.003623346750033355 58-59 0.004319427422716295 60-61 9.557705343810326E-4 62-63 8.560950090816699E-6 64-65 5.111149526549455E-4 66-67 0.0 68-69 0.0 70-71 0.0 72-73 1.4154902762895472E-4 74-75 1.8502788578395136E-5 76-77 0.0 78-79 0.0 80-81 4.72360226921853E-4 82-83 0.0 84-85 0.0 86-87 1.0069128088522537E-5 88-89 0.0 90-91 0.0010406648641310555 92-93 1.2721391974709873E-4 94-95 5.404502123212704E-6 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 334.0 20-21 1008.0 22-23 2303.0 24-25 5044.0 26-27 8426.0 28-29 17575.0 30-31 36855.0 32-33 45817.0 34-35 62732.0 36-37 95726.0 38-39 114090.0 40-41 114837.0 42-43 131596.0 44-45 153005.0 46-47 150669.0 48-49 142098.0 50-51 130721.0 52-53 127481.0 54-55 139407.0 56-57 146865.0 58-59 145587.0 60-61 144709.0 62-63 137438.0 64-65 141721.0 66-67 152053.0 68-69 150447.0 70-71 147777.0 72-73 141761.0 74-75 143206.0 76-77 140096.0 78-79 149245.0 80-81 152324.0 82-83 145465.0 84-85 145402.0 86-87 150589.0 88-89 162302.0 90-91 179532.0 92-93 175897.0 94-95 196509.0 96-97 290620.0 98-99 1117774.0 100-101 7695066.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 82.79474489105509 #Duplication Level Percentage of deduplicated Percentage of total 1 88.38983501452444 73.1821384099 2 7.741311700929518 12.818798548011983 3 2.09684021070229 5.20822050967207 4 0.8069292256867975 2.672379975435001 5 0.37935555965908074 1.570432339248851 6 0.1998433717711527 0.9927588590376519 7 0.12269664763640765 0.7111046348030836 8 0.07213055676973978 0.4777624837280298 9 0.04698808159249476 0.35013296055336174 >10 0.14131382125891923 1.7533564298673057 >50 0.0020310633417599112 0.11302571098575848 >100 6.482717456687301E-4 0.09178700664934006 >500 6.118574399368665E-5 0.036216123886491855 >1k 1.5288637814906705E-5 0.02188600822109687 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 7.335622096331536E-6 4.401373257798922E-5 0.0 0.0 0.0 3 1.4671244192663071E-5 4.401373257798922E-5 0.0 7.335622096331536E-6 0.0 4 1.4671244192663071E-5 1.1003433144497304E-4 0.0 2.9342488385326143E-5 0.0 5 1.4671244192663071E-5 1.247055756376361E-4 0.0 2.9342488385326143E-5 0.0 6 1.4671244192663071E-5 1.247055756376361E-4 0.0 2.9342488385326143E-5 2.200686628899461E-5 7 1.4671244192663071E-5 1.3204119773396766E-4 0.0 5.1349354674320755E-5 2.200686628899461E-5 8 1.4671244192663071E-5 1.5404806402296225E-4 0.0 5.8684976770652286E-5 2.200686628899461E-5 9 1.4671244192663071E-5 3.5210986062391374E-4 0.0 8.069184305964689E-5 2.200686628899461E-5 10-11 3.667811048165768E-5 3.5210986062391374E-4 0.0 1.0269870934864151E-4 2.200686628899461E-5 12-13 3.667811048165768E-5 3.5210986062391374E-4 0.0 1.357090087821334E-4 2.200686628899461E-5 14-15 3.667811048165768E-5 4.4747294787622367E-4 0.0 1.4304463087846497E-4 2.200686628899461E-5 16-17 4.401373257798922E-5 4.621441920688868E-4 0.0 1.723871192637911E-4 2.200686628899461E-5 18-19 5.501716572248652E-5 5.06157924646876E-4 0.0 1.9072617450461993E-4 4.401373257798922E-5 20-21 6.968840991514958E-5 5.501716572248653E-4 0.0 2.2006866288994608E-4 4.401373257798922E-5 22-23 9.903089830047573E-5 6.308635002845121E-4 0.0 2.640823954679353E-4 6.235278781881805E-5 24-25 1.357090087821334E-4 6.858806660069986E-4 0.0 3.961235932019029E-4 1.0269870934864151E-4 26-27 1.6138368611929378E-4 7.262265875368221E-4 0.0 5.244969798877048E-4 1.0269870934864151E-4 28-29 1.723871192637911E-4 7.298943985849879E-4 0.0 0.0013827647651584946 1.0269870934864151E-4 30-31 1.7605493031195687E-4 8.582677852707897E-4 0.0 0.003304697754397357 1.0269870934864151E-4 32-33 1.833905524082884E-4 8.582677852707897E-4 0.0 0.00654337490992773 1.1003433144497304E-4 34-35 1.9806179660095146E-4 0.0010489939597754096 0.0 0.010798035725800022 1.1736995354130457E-4 36-37 2.0906522974544877E-4 0.0012470557563763612 0.0 0.017165355705415795 1.1736995354130457E-4 38-39 2.1273304079361455E-4 0.001298405111050682 0.0 0.0281687888499131 1.247055756376361E-4 40-41 2.3473990708260914E-4 0.0014524531750736442 0.0 0.03780412847344457 1.247055756376361E-4 42-43 2.5674677337160376E-4 0.001500134718699799 0.0 0.04540383296524404 1.2837338668580188E-4 44-45 2.640823954679353E-4 0.0016211724832892694 0.0 0.054918134824186046 1.3204119773396766E-4 46-47 2.640823954679353E-4 0.0017018643263489164 0.0 0.06460482380239184 1.3204119773396766E-4 48-49 2.860892617569299E-4 0.0017018643263489164 0.0 0.0741337969055265 1.4671244192663072E-4 50-51 2.860892617569299E-4 0.0018925905008535361 0.0 0.08308692367409914 1.5038025297479647E-4 52-53 2.897570728050957E-4 0.0019072617450461994 0.0 0.0915669028174584 1.723871192637911E-4 54-55 3.190995611904218E-4 0.0019219329892388626 0.0 0.10044300555401955 1.943939855527857E-4 56-57 3.374386164312507E-4 0.001943939855527857 0.0 0.10860021732514022 2.0172960764911724E-4 58-59 3.5944548272024524E-4 0.00195861109972052 0.0 0.11563507891552216 2.0539741869728302E-4 60-61 3.6311329376841105E-4 0.0019989570212503435 0.0 0.12234350532261735 2.0539741869728302E-4 62-63 3.7044891586474255E-4 0.002039302942780167 0.0 0.12929767506993967 2.3473990708260914E-4 64-65 3.777845379610741E-4 0.002274042849862776 0.0 0.1359474165002642 2.3473990708260914E-4 66-67 3.8512016005740567E-4 0.0022850462830072736 0.0 0.14282089440452683 2.3473990708260914E-4 68-69 4.071270263464003E-4 0.0023473990708260915 0.0 0.15018952680029185 2.3473990708260914E-4 70-71 4.1079483739456604E-4 0.002391412803404081 0.0 0.1568832819631944 2.494111512752722E-4 72-73 4.144626484427318E-4 0.0024097518586449094 0.0 0.1624436835122137 2.787536396605984E-4 74-75 4.217982705390633E-4 0.002475772457511893 0.0 0.16671301557227866 2.787536396605984E-4 76-77 4.2913389263539485E-4 0.0025601321116197062 0.0 0.17057888841704538 2.8242145070876413E-4 78-79 4.364695147317264E-4 0.002611481466294027 0.0 0.17412932951166982 2.860892617569299E-4 80-81 4.621441920688868E-4 0.002611481466294027 0.0 0.17560745736408062 2.897570728050957E-4 82-83 4.621441920688868E-4 0.002611481466294027 0.0 0.176278666785895 3.080961280459245E-4 84-85 4.621441920688868E-4 0.002629820521534856 0.0 0.17697555088504646 3.080961280459245E-4 86-87 4.694798141652183E-4 0.0026995089314500054 0.0 0.17724696890261074 3.1543175014225606E-4 88-89 4.7681543626154984E-4 0.002809543262894978 0.0 0.17731665731252588 3.301029943349191E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14095 0.0 46.351635 1 GTATCAA 24835 0.0 34.313778 1 TCAACGC 29580 0.0 28.052607 4 ATCAACG 29770 0.0 27.83172 3 CAACGCA 30300 0.0 27.22194 5 AACGCAG 31105 0.0 26.58403 6 TATCAAC 31645 0.0 26.536903 2 ACGCAGA 36710 0.0 22.53638 7 CGCAGAG 37545 0.0 22.024136 8 GTACATG 37310 0.0 21.907875 1 TACATGG 37260 0.0 21.492682 2 ACATGGG 37390 0.0 20.951973 3 CATGGGG 28400 0.0 19.57603 4 GCAGAGT 45530 0.0 18.143236 9 GAGTACT 26270 0.0 17.638693 12-13 AGAGTAC 39875 0.0 17.370953 10-11 CAGAGTA 43245 0.0 16.951288 10-11 GTGGTAT 7705 0.0 16.72192 1 ATGGGGG 18350 0.0 15.509976 5 CTTATAC 9430 0.0 15.46427 1 >>END_MODULE