##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139865_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13118654 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.465109377837084 31.0 31.0 34.0 30.0 34.0 2 31.68548503527877 31.0 31.0 34.0 30.0 34.0 3 31.694098266483742 31.0 31.0 34.0 30.0 34.0 4 35.47591612676118 37.0 35.0 37.0 33.0 37.0 5 35.253019783889414 37.0 35.0 37.0 33.0 37.0 6 35.25522305870709 37.0 35.0 37.0 32.0 37.0 7 35.13382394260875 37.0 35.0 37.0 32.0 37.0 8 35.09967966225803 37.0 35.0 37.0 32.0 37.0 9 36.62792356593901 38.0 35.0 39.0 32.0 39.0 10-11 36.43135092212967 38.0 35.0 39.0 32.0 39.0 12-13 36.382533680665716 38.0 35.0 39.0 32.0 39.0 14-15 37.416140443981526 39.0 36.0 40.0 32.0 41.0 16-17 37.41081299194262 39.0 36.0 40.0 32.0 41.0 18-19 37.38266277165325 39.0 36.0 40.0 32.0 41.0 20-21 37.344331521587 39.0 36.0 40.0 32.0 41.0 22-23 37.2399255739359 39.0 36.0 40.0 31.0 41.0 24-25 37.108988937842724 39.0 36.0 40.0 31.0 41.0 26-27 36.90124565572639 39.0 36.0 40.0 31.0 41.0 28-29 36.729412705013516 38.5 35.5 40.0 30.0 41.0 30-31 36.5874989723825 38.0 35.0 40.0 30.0 41.0 32-33 36.777378536247035 38.5 35.0 40.0 30.0 41.0 34-35 36.725232572039914 38.0 35.0 40.0 30.0 41.0 36-37 36.60042559482139 38.0 35.0 40.0 30.0 41.0 38-39 36.377040977916344 38.0 35.0 40.0 30.0 41.0 40-41 36.345046292342964 38.0 35.0 40.0 30.0 41.0 42-43 36.20295189585069 38.0 35.0 40.0 30.0 41.0 44-45 36.264373484711186 38.0 35.0 40.0 30.0 41.0 46-47 36.43631086128179 38.0 35.0 40.0 30.0 41.0 48-49 36.35975010752388 38.0 35.0 40.0 30.0 41.0 50-51 36.20112354832732 38.0 34.5 40.0 29.0 41.0 52-53 36.04837839365955 38.0 34.0 40.0 29.0 41.0 54-55 35.877702110555106 38.0 34.0 40.0 28.0 41.0 56-57 35.664885869298274 38.0 34.0 40.0 28.0 41.0 58-59 35.4802878530582 37.5 34.0 40.0 28.0 41.0 60-61 35.24069136525091 37.0 33.0 40.0 28.0 41.0 62-63 34.964430424450526 37.0 33.0 39.0 27.5 41.0 64-65 34.718333663337845 36.0 33.0 39.0 27.0 40.0 66-67 34.426597002067034 36.0 32.0 39.0 27.0 40.0 68-69 34.0817338970232 35.0 32.0 38.5 26.0 40.0 70-71 33.71877105545488 35.0 32.0 38.0 26.0 40.0 72-73 33.42363159918804 35.0 31.0 37.0 26.0 39.5 74-75 33.063222577132336 34.5 31.0 37.0 26.0 39.0 76-77 32.06406125539512 34.0 30.0 36.0 25.5 38.0 78-79 32.43487368984799 34.0 31.0 36.0 26.0 38.0 80-81 32.32804814919205 34.0 31.0 35.5 26.0 37.0 82-83 31.894325972276757 34.0 30.5 35.0 25.0 37.0 84-85 31.642064532451517 34.0 30.0 35.0 25.0 36.0 86-87 31.55511834120032 34.0 30.0 35.0 25.0 36.0 88-89 31.40202211173078 34.0 30.0 35.0 25.0 35.5 90-91 31.296313998863347 34.0 30.0 35.0 25.0 35.0 92-93 31.227659260828 33.0 30.0 35.0 25.0 35.0 94-95 31.19864510901131 33.0 30.0 35.0 25.0 35.0 96-97 31.149239539281638 33.0 30.0 34.0 25.0 35.0 98-99 31.45300602220297 33.0 30.0 34.0 25.0 35.0 100-101 30.617306590644098 32.0 28.0 34.0 22.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 5.0 19 33.0 20 236.0 21 1315.0 22 5885.0 23 18386.0 24 44834.0 25 89785.0 26 152516.0 27 230517.0 28 319017.0 29 410685.0 30 507132.0 31 613793.0 32 741267.0 33 911706.0 34 1151395.0 35 1481456.0 36 1943153.0 37 2222604.0 38 1616064.0 39 649987.0 40 6883.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.90100020932026 23.47743144990332 15.475619678665204 25.145948662111216 2 14.931632698486846 23.53978548852038 38.23700969436261 23.291572118630167 3 17.2534558235514 27.67031035884553 31.938340010975214 23.13789380662786 4 12.693367779956693 19.84835486933339 37.52830892559557 29.929968425114346 5 12.427105707643483 38.601025684494765 36.28151180753757 12.69035680032418 6 29.882219624055946 39.17410276999455 17.80597308229945 13.137704523650061 7 25.541919163353192 32.88902199875079 23.475419048326145 18.093639789569878 8 24.903789672324613 36.48439085290305 21.21302231158776 17.398797163184575 9 25.366954567137757 15.467806377087163 20.5213736104329 38.643865445342186 10-11 24.10711876386099 26.729582928248586 29.142669667177746 20.020628640712683 12-13 24.78610229372617 24.07289650294916 28.92175523495017 22.219245968374498 14-15 22.03485967386593 25.54472432918804 25.978122450672146 26.442293546273877 16-17 22.04068025088932 28.65859041011997 26.749051374498855 22.551677964491855 18-19 22.058574890642884 27.607590905293357 28.25546663609404 22.07836756796972 20-21 22.7401286823548 26.929646424262376 27.948134612040636 22.382090281342187 22-23 22.341410755073017 27.216014607921444 27.89527487297824 22.547299764027294 24-25 22.168437921939685 27.488541774159632 28.11081307355482 22.232207230345864 26-27 22.185174992265118 27.556657900147762 28.135432052890465 22.12273505469666 28-29 21.81526954020544 27.103764890532762 28.273557645426312 22.80740792383549 30-31 22.06097663206711 27.11614424671084 28.245043121712786 22.57783599950926 32-33 22.058215456440717 27.482939189636298 28.137621498299335 22.321223855623646 34-35 22.002938569200463 27.782475291239734 28.388587458151516 21.825998681408294 36-37 22.24936784627976 27.349227871808278 27.915702754640982 22.48570152727098 38-39 22.29102134481488 27.266680697812156 28.12551198684932 22.316785970523643 40-41 22.27171259117342 27.124226965026942 28.423304062213084 22.180756381586555 42-43 22.537803051382266 27.15804607196751 28.11053945384941 22.193611422800807 44-45 22.24906225029721 27.584129319764877 27.78626616381965 22.380542266118265 46-47 22.747804407745747 27.086812414855537 27.3820863052627 22.783296872136013 48-49 22.534249579095608 27.023545129592996 27.629513024646187 22.812692266665206 50-51 22.155496684064676 27.34526335790578 27.678475342355192 22.820764615674353 52-53 22.291992317467827 27.546517798701807 27.705694512902017 22.455795370928346 54-55 22.358895722037424 27.430183612001596 27.427129693542085 22.783790972418895 56-57 22.691824111604213 27.593304243800958 27.19184282001079 22.523028824584035 58-59 22.23812009739282 27.787982165066605 27.709422388577604 22.26447534896297 60-61 22.548041381001738 28.131576541958985 26.943809583363 22.376572493676278 62-63 22.299847000909327 28.28064792874635 26.93707187064342 22.482433199700907 64-65 22.206045147030874 27.998291157539356 27.136449117145574 22.659214578284196 66-67 22.354966668936243 27.970930130339184 26.91236171297592 22.761741487748658 68-69 22.42261160611445 27.823089993457117 27.008543033378125 22.745755367050307 70-71 22.446815837218363 27.37571204036357 27.120799649688276 23.05667247272979 72-73 22.445259893328224 27.448481654237668 27.089217177294415 23.01704127513969 74-75 22.30478023503968 27.604526922492962 27.09689202348941 22.993800818977945 76-77 22.486730993900455 27.5853990601112 26.98925447545709 22.938615470531257 78-79 22.529573370088084 27.623035306009097 26.851201550810522 22.996189773092297 80-81 22.482533936454765 27.510226540260913 26.905695082588473 23.101544440695854 82-83 22.602977297448057 27.39207399617159 27.015833302658766 22.989115403721584 84-85 22.696645985498552 27.440341078975354 26.88427557438615 22.97873736113994 86-87 22.436960046463227 27.594068957686073 27.076622210763606 22.89234878508709 88-89 22.485441206237784 27.332771661150456 27.209613789669092 22.972173342942664 90-91 22.416711317215558 27.26831648243529 27.339767599268278 22.975204601080875 92-93 22.368203904001383 27.30910520755848 27.422919508001048 22.899771380439084 94-95 22.061322851246565 27.43425150729566 27.507910307440397 22.996515334017378 96-97 21.891666506269306 27.456450721606807 27.689103607490082 22.962779164633805 98-99 22.000968512931802 28.120186020185667 27.738439422319033 22.1404060445635 100-101 25.0121738467553 36.11256906539779 28.776944325833643 10.098312762013272 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2105.0 1 2144.5 2 3505.0 3 5041.5 4 6489.5 5 9361.5 6 11636.0 7 13636.0 8 15097.5 9 15026.5 10 14118.0 11 13434.0 12 15459.5 13 21452.0 14 34704.5 15 52467.5 16 65115.0 17 69354.5 18 68941.5 19 66805.5 20 63558.5 21 60893.5 22 61088.0 23 67625.5 24 81169.0 25 101314.5 26 128887.0 27 157817.5 28 183765.5 29 209908.5 30 232779.0 31 254926.0 32 283616.0 33 313165.5 34 344159.5 35 379608.0 36 418818.5 37 448496.5 38 457823.5 39 463637.0 40 480877.0 41 495522.0 42 502582.5 43 516004.0 44 532367.0 45 552016.0 46 576715.0 47 606823.0 48 624222.0 49 628641.0 50 629768.0 51 615172.0 52 583405.0 53 546895.5 54 510933.5 55 470730.0 56 432875.5 57 399603.5 58 362175.5 59 313164.0 60 259017.0 61 205916.0 62 158964.0 63 121704.0 64 91695.0 65 67577.0 66 49225.5 67 36562.5 68 27466.0 69 20309.5 70 15211.5 71 11488.5 72 8485.5 73 6075.5 74 4341.5 75 3119.5 76 2208.5 77 1484.0 78 1033.0 79 756.0 80 562.5 81 401.0 82 282.5 83 192.0 84 131.5 85 100.0 86 79.5 87 62.0 88 44.0 89 27.0 90 14.0 91 9.0 92 8.5 93 6.5 94 4.0 95 2.5 96 2.0 97 1.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 7.775187911808636E-4 3 7.622733246871211E-6 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0015245466493742422 18-19 0.001265373718980621 20-21 2.286981055411264E-5 22-23 0.002344574979450658 24-25 1.3728572843921914E-4 26-27 0.0012514539090097622 28-29 4.925274235642301E-4 30-31 1.3385167330080177E-4 32-33 8.631075385193387E-4 34-35 0.015610132547823655 36-37 0.02901025372709845 38-39 0.004905444237264836 40-41 0.0030013739974226097 42-43 0.0069756156739051315 44-45 0.004874178946171821 46-47 0.0027301150311660844 48-49 0.0011368096002823934 50-51 1.3452052177819986E-4 52-53 9.36332736222598E-5 54-55 0.004165043936260269 56-57 0.010734325786437966 58-59 0.009160029713290182 60-61 0.007407542412014907 62-63 0.0016480367360701303 64-65 0.0010420802276538746 66-67 0.0012340362638947003 68-69 0.0 70-71 4.94399491994634E-6 72-73 1.8123788191919035E-4 74-75 2.614210633716951E-4 76-77 4.1769105397654416E-5 78-79 2.1290598843334992E-4 80-81 0.0020008195748443263 82-83 0.003664132595561996 84-85 0.010514935129670748 86-87 0.006817306651992783 88-89 0.07014585157934972 90-91 0.0 92-93 1.905692003455909E-5 94-95 5.948217200340714E-5 96-97 0.006401537038330981 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 555.0 20-21 1964.0 22-23 3575.0 24-25 5918.0 26-27 8289.0 28-29 15556.0 30-31 36913.0 32-33 50918.0 34-35 72139.0 36-37 109487.0 38-39 121630.0 40-41 128614.0 42-43 141717.0 44-45 162964.0 46-47 166715.0 48-49 159215.0 50-51 150051.0 52-53 134999.0 54-55 160784.0 56-57 175699.0 58-59 177851.0 60-61 197140.0 62-63 188538.0 64-65 197945.0 66-67 204621.0 68-69 185082.0 70-71 183983.0 72-73 177203.0 74-75 178586.0 76-77 178327.0 78-79 195087.0 80-81 204174.0 82-83 196952.0 84-85 197845.0 86-87 211317.0 88-89 234101.0 90-91 262501.0 92-93 289505.0 94-95 376945.0 96-97 450853.0 98-99 1104701.0 100-101 5717695.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 83.11336943499667 #Duplication Level Percentage of deduplicated Percentage of total 1 89.60510589169974 74.47382269238837 2 6.727571540696618 11.183022777245757 3 1.8524133009686257 4.618809330891213 4 0.7419517995834133 2.4666445608694736 5 0.39322994351302193 1.634133278405033 6 0.22361125143045998 1.1151050729977052 7 0.12960931486251423 0.7540586807869464 8 0.08243676854052491 0.5481278078988768 9 0.05656151382002167 0.42309161945335183 >10 0.18312054372486836 2.29049169254063 >50 0.0031405265573477424 0.17221069596496208 >100 0.0010982938784885978 0.16684698035811477 >500 6.638370229365203E-5 0.02924178459140741 >1k 8.292702216205029E-5 0.12439302560814307 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.5245466493742422E-5 0.0 3 0.0 0.0 0.0 1.5245466493742422E-5 0.0 4 0.0 0.0 0.0 2.286819974061363E-5 0.0 5 0.0 0.0 0.0 2.286819974061363E-5 0.0 6 0.0 0.0 0.0 3.0490932987484844E-5 0.0 7 0.0 0.0 0.0 3.0490932987484844E-5 0.0 8 0.0 0.0 0.0 6.098186597496969E-5 0.0 9 0.0 0.0 0.0 1.5245466493742421E-4 0.0 10-11 0.0 0.0 0.0 1.9437969779521587E-4 0.0 12-13 0.0 0.0 0.0 2.4392746389987875E-4 0.0 14-15 0.0 0.0 0.0 2.6298429701705674E-4 0.0 16-17 0.0 0.0 0.0 3.697025624732537E-4 0.0 18-19 0.0 0.0 0.0 4.6879809468257946E-4 0.0 20-21 0.0 0.0 0.0 5.755163601387764E-4 0.0 22-23 0.0 0.0 0.0 8.30877923908962E-4 0.0 24-25 0.0 0.0 0.0 0.0016122080817132611 0.0 26-27 0.0 0.0 0.0 0.004020991787724564 0.0 28-29 0.0 0.0 0.0 0.02174384658670013 0.0 30-31 0.0 0.0 0.0 0.03387542654909566 0.0 32-33 0.0 0.0 0.0 0.041570575761812154 0.0 34-35 0.0 0.0 0.0 0.05248632977133172 0.0 36-37 0.0 3.8113666234356055E-6 0.0 0.06930207931392962 0.0 38-39 0.0 7.622733246871211E-6 0.0 0.10201885040950084 0.0 40-41 0.0 7.622733246871211E-6 0.0 0.16935045317911424 0.0 42-43 0.0 7.622733246871211E-6 0.0 0.197066711264738 0.0 44-45 0.0 7.622733246871211E-6 0.0 0.23914419878746707 0.0 46-47 0.0 7.622733246871211E-6 0.0 0.29117697593061 0.0 48-49 0.0 7.622733246871211E-6 0.0 0.3346646691040102 0.0 50-51 0.0 7.622733246871211E-6 0.0 0.38244396109539897 0.0 52-53 0.0 7.622733246871211E-6 0.0 0.43755251110365434 0.0 54-55 0.0 7.622733246871211E-6 3.8113666234356055E-6 0.5776964618473815 0.0 56-57 0.0 7.622733246871211E-6 7.622733246871211E-6 0.7046911977402559 0.0 58-59 0.0 7.622733246871211E-6 7.622733246871211E-6 0.8390266257498673 0.0 60-61 0.0 7.622733246871211E-6 7.622733246871211E-6 0.9154178469833871 0.0 62-63 0.0 7.622733246871211E-6 7.622733246871211E-6 0.9489197596033861 0.0 64-65 0.0 7.622733246871211E-6 7.622733246871211E-6 0.9821167628935104 0.0 66-67 0.0 7.622733246871211E-6 7.622733246871211E-6 0.9960892329350253 0.0 68-69 0.0 7.622733246871211E-6 7.622733246871211E-6 1.0064752069838874 0.0 70-71 0.0 7.622733246871211E-6 7.622733246871211E-6 1.0170669948304147 0.0 72-73 0.0 7.622733246871211E-6 7.622733246871211E-6 1.0254901150682074 0.0 74-75 0.0 7.622733246871211E-6 7.622733246871211E-6 1.0338903671062596 0.0 76-77 0.0 7.622733246871211E-6 7.622733246871211E-6 1.0410709818248123 0.0 78-79 0.0 7.622733246871211E-6 7.622733246871211E-6 1.0480534054789463 0.0 80-81 0.0 7.622733246871211E-6 7.622733246871211E-6 1.0527604432588893 0.0 82-83 0.0 7.622733246871211E-6 7.622733246871211E-6 1.0560267844551734 0.0 84-85 0.0 7.622733246871211E-6 7.622733246871211E-6 1.0593045597513282 0.0 86-87 0.0 7.622733246871211E-6 7.622733246871211E-6 1.0598381510786092 0.0 88-89 0.0 7.622733246871211E-6 7.622733246871211E-6 1.060002039843417 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 13965 0.0 40.210968 1 GTATCAA 22395 0.0 31.076149 1 ATCAACG 29845 0.0 22.730843 3 TCAACGC 29960 0.0 22.656904 4 CAACGCA 30520 0.0 22.201979 5 TATCAAC 31340 0.0 21.939215 2 CTTATAC 27215 0.0 21.527634 1 AACGCAG 32785 0.0 20.826265 6 TATACAC 31140 0.0 20.581646 3 TTATACA 32750 0.0 18.778284 2 ACGCAGA 36440 0.0 18.59507 7 TACATGG 35460 0.0 18.06299 2 CGCAGAG 38330 0.0 17.667768 8 GTACATG 36765 0.0 17.649637 1 ACATGGG 35825 0.0 17.46705 3 TACACAT 38310 0.0 16.500608 5 AGAGTAC 39820 0.0 16.125872 10-11 ATACACA 43495 0.0 15.432192 4 ACACATC 39295 0.0 15.183683 6 CATGGGG 26080 0.0 15.170047 4 >>END_MODULE