##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139762_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8561088 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09879164891191 33.0 33.0 34.0 30.0 34.0 2 32.45141855801506 33.0 33.0 34.0 31.0 34.0 3 32.80827682182451 33.0 33.0 34.0 32.0 34.0 4 32.99732358784304 33.0 33.0 34.0 32.0 34.0 5 33.12020107724626 34.0 33.0 34.0 32.0 34.0 6 36.7602229996935 38.0 37.0 38.0 34.0 38.0 7 37.18306843709585 38.0 38.0 38.0 36.0 38.0 8 37.34445318165168 38.0 38.0 38.0 37.0 38.0 9 37.344370715497845 38.0 38.0 38.0 37.0 38.0 10-11 37.392340611380234 38.0 38.0 38.0 37.0 38.0 12-13 37.39722824949352 38.0 38.0 38.0 37.0 38.0 14-15 37.4097153889786 38.0 38.0 38.0 37.0 38.0 16-17 37.36411440929004 38.0 38.0 38.0 37.0 38.0 18-19 37.348304678096994 38.0 38.0 38.0 37.0 38.0 20-21 37.40763304218727 38.0 38.0 38.0 37.0 38.0 22-23 37.423564712795 38.0 38.0 38.0 37.0 38.0 24-25 37.42418013419824 38.0 38.0 38.0 37.0 38.0 26-27 37.333230907313286 38.0 38.0 38.0 37.0 38.0 28-29 37.24521300595846 38.0 38.0 38.0 37.0 38.0 30-31 37.32560428799627 38.0 38.0 38.0 37.0 38.0 32-33 37.34309995029951 38.0 38.0 38.0 37.0 38.0 34-35 37.2956027252264 38.0 38.0 38.0 37.0 38.0 36-37 37.303245524480104 38.0 38.0 38.0 37.0 38.0 38-39 37.28871035228102 38.0 38.0 38.0 37.0 38.0 40-41 37.26914723391293 38.0 38.0 38.0 37.0 38.0 42-43 37.274749736739274 38.0 38.0 38.0 37.0 38.0 44-45 37.21601971351168 38.0 38.0 38.0 37.0 38.0 46-47 37.19991311349119 38.0 38.0 38.0 37.0 38.0 48-49 37.18333191964268 38.0 38.0 38.0 37.0 38.0 50-51 37.18322643679484 38.0 38.0 38.0 37.0 38.0 52-53 37.16782028365491 38.0 38.0 38.0 36.5 38.0 54-55 37.12722364401162 38.0 38.0 38.0 36.0 38.0 56-57 37.120336127091974 38.0 38.0 38.0 36.0 38.0 58-59 37.130568711580466 38.0 38.0 38.0 36.0 38.0 60-61 37.13874419038105 38.0 38.0 38.0 36.0 38.0 62-63 37.07432805751159 38.0 38.0 38.0 36.0 38.0 64-65 37.100991320288955 38.0 38.0 38.0 36.0 38.0 66-67 37.117063983417374 38.0 38.0 38.0 36.0 38.0 68-69 37.08543833098375 38.0 38.0 38.0 36.0 38.0 70-71 37.03592437017902 38.0 38.0 38.0 36.0 38.0 72-73 37.05311648561674 38.0 38.0 38.0 36.0 38.0 74-75 37.07269757724926 38.0 38.0 38.0 36.0 38.0 76-77 37.01211278261947 38.0 38.0 38.0 36.0 38.0 78-79 37.03841406645619 38.0 38.0 38.0 36.0 38.0 80-81 37.01670465467389 38.0 38.0 38.0 36.0 38.0 82-83 36.97623792835826 38.0 38.0 38.0 36.0 38.0 84-85 36.999983378131446 38.0 38.0 38.0 36.0 38.0 86-87 37.02320953880668 38.0 38.0 38.0 36.0 38.0 88-89 36.93491586835468 38.0 38.0 38.0 36.0 38.0 90-91 36.89720432147526 38.0 38.0 38.0 35.0 38.0 92-93 36.95195116213662 38.0 38.0 38.0 36.0 38.0 94-95 36.937373009000005 38.0 38.0 38.0 35.5 38.0 96-97 36.88780805589764 38.0 38.0 38.0 35.0 38.0 98-99 36.90073536691679 38.0 38.0 38.0 35.0 38.0 100 35.36826013288148 38.0 35.0 38.0 29.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 8.0 19 20.0 20 70.0 21 214.0 22 527.0 23 1429.0 24 3502.0 25 7054.0 26 12495.0 27 20222.0 28 31697.0 29 45535.0 30 62540.0 31 84730.0 32 111189.0 33 149730.0 34 218313.0 35 383807.0 36 1056520.0 37 6371485.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.54035094604798 20.28526047156623 12.917715598765017 25.256672983620774 2 14.428558462913019 21.757718100187628 40.52703882934355 23.286684607555802 3 18.49094414167919 25.76048745206217 30.388252053944548 25.3603163523141 4 12.443749828438802 17.75767907922886 38.97841219892105 30.820158893411293 5 13.106119799499744 37.94864888006208 35.86634032595368 13.078890994484501 6 30.20928483155123 38.121973213597386 18.611562119644063 13.057179835207322 7 26.48749924075 32.45402449223696 23.208111593397096 17.850364673615946 8 24.36988149169825 36.829407664072605 21.505946440452426 17.294764403776718 9 25.409644194756552 16.486374161788785 21.146751440938345 36.957230202516314 10-11 23.963899214679255 26.788557716028617 29.38854267121188 19.859000398080244 12-13 24.705457997861956 24.169982833957555 29.389331122399398 21.735228045781096 14-15 21.74522677491459 25.72682934692413 26.6396163665179 25.88832751164338 16-17 21.728219590780984 28.94978418630903 27.368892832312902 21.953103390597086 18-19 21.74942600753549 28.18441417726345 28.858434815761736 21.20772499943932 20-21 22.26859234915294 27.439655482059667 28.77780759664745 21.51394457213994 22-23 21.95726887450437 27.5199886550916 28.658100707906165 21.86464176249787 24-25 21.84247190603025 27.595070444541626 28.817482958576708 21.74497469085141 26-27 21.959317665258148 27.736332103486145 28.661682047983263 21.642668183272445 28-29 21.789605619592255 27.60838161140145 28.813873884076425 21.788138884929875 30-31 22.1223902069303 27.62767228110367 28.649849581226345 21.600087930739683 32-33 21.841196513532914 27.619483209471095 28.72688813671212 21.81243214028387 34-35 21.84345694094631 27.794538395432884 28.83928182166768 21.522722841953126 36-37 21.960957804434443 27.67728284323966 28.639831546604537 21.72192780572136 38-39 21.69370768469058 27.689032671188997 28.8705478359842 21.746711808136222 40-41 21.973784215263574 27.520341236662016 28.792254897335496 21.713619650738913 42-43 21.918922000485942 27.59560791465913 28.669350197678146 21.81611988717678 44-45 21.85237309799791 27.7662621839051 28.585153405155307 21.796211312941686 46-47 22.03831329934144 27.602222854329128 28.36136730155306 21.998096544776377 48-49 21.91876376267584 27.682653404397477 28.388842167322903 22.00974066560378 50-51 21.822445755330737 27.817084496255013 28.457617440186873 21.90285230822738 52-53 21.965474927024 27.769082204629186 28.51389724418249 21.751545624164322 54-55 21.918409245599797 27.733795286889574 28.374750225183 21.973045242327633 56-57 22.063750290932607 27.857278918418064 28.20964303316006 21.86932775748927 58-59 21.833762964378845 28.05998988291248 28.405531426084362 21.700715726624313 60-61 22.035174812088343 28.202215815947284 28.13763643152372 21.62497294044065 62-63 21.869372350695627 28.355449419067792 28.090174567076232 21.685003663160348 64-65 21.83326206929426 28.312647574285727 28.12412503207205 21.729965324347962 66-67 21.888500035005976 28.280102303497507 28.032087898505875 21.79930976299064 68-69 21.91764275785706 28.200921582628798 28.06816134534231 21.81327431417183 70-71 21.960540298859936 27.93281024662645 28.160232231392897 21.946417223120715 72-73 21.99517182732712 27.805516350039706 28.19820558408002 22.00110623855315 74-75 21.879741680147816 27.915996657646847 28.174081703045523 22.030179959159813 76-77 22.024584774879518 27.845846008607406 28.11382133274457 22.01574788376851 78-79 21.973891716734375 27.85072172858621 28.1067829470641 22.068603607615316 80-81 22.013384580695085 27.914809951177805 28.025140719035335 22.04666474909177 82-83 22.05006898666898 27.888155906739463 28.110008903773604 21.95176620281795 84-85 22.10283141924169 27.838857203615277 28.095661518516913 21.962649858626122 86-87 21.960408042375665 27.847174141815835 28.163431222900996 22.028986592907504 88-89 22.04730848999189 27.86862601265246 28.06542355211687 22.01864194523878 90-91 22.08538397326423 27.907011329597776 28.057725865791355 21.94987883134664 92-93 22.10544864823192 27.88186410253326 28.099155888542914 21.913531360691902 94-95 22.04438512723899 27.950114191224745 28.04868055645406 21.956820125082206 96-97 22.136484689549928 28.02761696280081 28.13347704821486 21.702421299434402 98-99 23.13684406477838 29.9578136203063 28.387007987217643 18.51833432769768 100 22.04425692482898 30.865223603850268 22.394807490772305 24.69571198054845 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 961.0 1 940.5 2 1446.5 3 2196.0 4 2752.5 5 3652.5 6 4678.5 7 6043.0 8 7688.5 9 8695.5 10 8759.0 11 8812.5 12 9726.0 13 11721.0 14 15242.0 15 18985.0 16 21391.5 17 22353.0 18 22128.5 19 21439.0 20 20937.5 21 21562.5 22 24423.5 23 29731.0 24 38554.0 25 50748.0 26 65869.0 27 83657.0 28 102496.5 29 123575.0 30 145530.0 31 167260.5 32 189367.5 33 209611.0 34 228896.5 35 247069.5 36 265924.5 37 284068.5 38 298027.5 39 310900.5 40 325269.5 41 337156.5 42 345156.0 43 361742.5 44 372865.0 45 372594.0 46 369148.0 47 361631.5 48 355787.0 49 347140.5 50 337862.0 51 326974.0 52 310314.0 53 290955.5 54 271751.0 55 250960.5 56 228614.0 57 205739.0 58 182401.5 59 158301.0 60 132559.5 61 107153.0 62 84328.5 63 65368.5 64 49457.5 65 36610.0 66 27047.5 67 20424.0 68 15350.5 69 11046.0 70 8011.0 71 5985.5 72 4417.5 73 3064.0 74 2014.5 75 1386.0 76 924.0 77 563.5 78 350.5 79 213.5 80 135.5 81 88.0 82 59.0 83 43.5 84 29.0 85 18.5 86 15.0 87 11.5 88 7.0 89 4.0 90 3.0 91 2.5 92 2.0 93 2.0 94 1.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 1.2848834166872248E-4 3 0.0 4 3.504227500056068E-5 5 0.003515908258389588 6 3.270612333385663E-4 7 9.344606666816181E-5 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 9.700222795418385E-4 30-31 0.0 32-33 0.0 34-35 5.875649516331221E-6 36-37 0.0 38-39 0.0 40-41 0.0 42-43 1.79933654862779E-5 44-45 1.8108912796409703E-5 46-47 3.0402738386807594E-5 48-49 8.574630058304422E-5 50-51 4.6249433059033086E-4 52-53 1.675537811954888E-4 54-55 3.185216001051246E-4 56-57 3.83611367725455E-4 58-59 3.546731512741158E-4 60-61 3.189104386593949E-5 62-63 2.954411819959428E-4 64-65 5.174212835682717E-5 66-67 7.170678911404893E-5 68-69 4.2081221491616235E-4 70-71 6.633661987060379E-5 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0011326861302512112 90-91 0.0 92-93 2.173714416385575E-5 94-95 8.771843260318703E-5 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 104.0 20-21 246.0 22-23 403.0 24-25 579.0 26-27 2019.0 28-29 6441.0 30-31 15455.0 32-33 20038.0 34-35 27885.0 36-37 44002.0 38-39 49249.0 40-41 46433.0 42-43 50712.0 44-45 59196.0 46-47 60285.0 48-49 56580.0 50-51 52030.0 52-53 50495.0 54-55 54061.0 56-57 56375.0 58-59 55535.0 60-61 54915.0 62-63 53748.0 64-65 57966.0 66-67 64429.0 68-69 66974.0 70-71 75421.0 72-73 55915.0 74-75 54205.0 76-77 56399.0 78-79 58385.0 80-81 57914.0 82-83 54425.0 84-85 53514.0 86-87 55690.0 88-89 58516.0 90-91 59308.0 92-93 58984.0 94-95 71419.0 96-97 255464.0 98-99 585581.0 100-101 5943793.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 86.39466337708367 #Duplication Level Percentage of deduplicated Percentage of total 1 90.51691606397296 78.20178493278681 2 6.746855222568591 11.657845716154648 3 1.554140769823767 4.0280840594857805 4 0.5715321767610871 1.9750932008178406 5 0.24366770610918057 1.0525794722584405 6 0.12168580564504758 0.6307802529883869 7 0.06882851027600916 0.41624911832293693 8 0.044692043856683177 0.30889232677056033 9 0.03102078331354594 0.24120271188605302 >10 0.09842577772249587 1.2811198440966185 >50 0.001818658530684181 0.10213561492866557 >100 3.542771363333794E-4 0.05866024743082333 >500 4.1469568111533523E-5 0.02538377607117462 >1k 2.0734715510460293E-5 0.020188726001225312 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 1.1680758333520226E-5 0.0 0.0 0.0 3 0.0 1.1680758333520226E-5 0.0 0.0 0.0 4 0.0 2.3361516667040452E-5 0.0 0.0 0.0 5 0.0 2.3361516667040452E-5 0.0 0.0 0.0 6 2.3361516667040452E-5 2.3361516667040452E-5 0.0 0.0 0.0 7 2.3361516667040452E-5 2.3361516667040452E-5 0.0 0.0 0.0 8 2.3361516667040452E-5 3.5042275000560675E-5 0.0 0.0 0.0 9 2.3361516667040452E-5 7.008455000112135E-5 0.0 0.0 1.1680758333520226E-5 10-11 2.3361516667040452E-5 7.008455000112135E-5 0.0 0.0 1.1680758333520226E-5 12-13 2.3361516667040452E-5 7.008455000112135E-5 0.0 5.840379166760113E-6 1.1680758333520226E-5 14-15 2.3361516667040452E-5 8.176530833464158E-5 0.0 1.1680758333520226E-5 2.9201895833800563E-5 16-17 4.6723033334080904E-5 8.176530833464158E-5 0.0 4.6723033334080904E-5 3.5042275000560675E-5 18-19 4.6723033334080904E-5 1.0512682500168202E-4 0.0 9.344606666816181E-5 4.088265416732079E-5 20-21 4.6723033334080904E-5 1.2848834166872248E-4 0.0 9.344606666816181E-5 4.6723033334080904E-5 22-23 4.6723033334080904E-5 1.401691000022427E-4 0.0 9.344606666816181E-5 6.424417083436124E-5 24-25 4.6723033334080904E-5 1.6353061666928316E-4 0.0 1.1680758333520225E-4 8.176530833464158E-5 26-27 4.6723033334080904E-5 1.7521137500280337E-4 0.0 1.2848834166872248E-4 8.176530833464158E-5 28-29 4.6723033334080904E-5 1.7521137500280337E-4 0.0 2.861785791712455E-4 9.344606666816181E-5 30-31 4.6723033334080904E-5 1.9857289166984383E-4 0.0 8.234934625131759E-4 9.344606666816181E-5 32-33 4.6723033334080904E-5 1.9857289166984383E-4 0.0 0.0021083768792004008 9.344606666816181E-5 34-35 4.6723033334080904E-5 2.628170625042051E-4 0.0 0.003492546741722547 9.344606666816181E-5 36-37 4.6723033334080904E-5 3.036997166715259E-4 0.0 0.005822858029259833 9.344606666816181E-5 38-39 4.6723033334080904E-5 3.1538047500504607E-4 0.0 0.009420531595984062 9.344606666816181E-5 40-41 4.6723033334080904E-5 3.854650250061674E-4 0.0 0.013117491608543214 9.344606666816181E-5 42-43 4.6723033334080904E-5 3.9130540417292754E-4 0.0 0.016481550008597037 1.0512682500168202E-4 44-45 4.6723033334080904E-5 4.205073000067281E-4 0.0 0.02025443495032407 1.1680758333520225E-4 46-47 4.6723033334080904E-5 4.5554957500728877E-4 0.0 0.02479824994206344 1.1680758333520225E-4 48-49 5.256341250084101E-5 4.5554957500728877E-4 0.0 0.029125970904632682 1.401691000022427E-4 50-51 6.424417083436124E-5 5.022726083413697E-4 0.0 0.033570499450537125 1.401691000022427E-4 52-53 7.008455000112135E-5 5.022726083413697E-4 0.0 0.037734689796437085 1.401691000022427E-4 54-55 7.008455000112135E-5 5.022726083413697E-4 0.0 0.04240115275067842 1.4600947916900282E-4 56-57 7.008455000112135E-5 5.139533666748899E-4 0.0 0.046512779684077535 1.6937099583604328E-4 58-59 7.008455000112135E-5 5.139533666748899E-4 0.0 0.0508813833008141 1.9273251250308374E-4 60-61 9.344606666816181E-5 5.139533666748899E-4 0.0 0.05520910426338335 1.9857289166984383E-4 62-63 1.1680758333520225E-4 5.139533666748899E-4 0.0 0.05881845858844109 1.9857289166984383E-4 64-65 1.1680758333520225E-4 5.957186750095315E-4 0.0 0.062427812913498845 1.9857289166984383E-4 66-67 1.3432872083548258E-4 5.957186750095315E-4 0.0 0.06625910164689347 1.9857289166984383E-4 68-69 1.401691000022427E-4 6.015590541762917E-4 0.0 0.07012543265528867 2.1025365000336405E-4 70-71 1.401691000022427E-4 6.073994333430518E-4 0.0 0.07360045825951095 2.219344083368843E-4 72-73 1.401691000022427E-4 6.073994333430518E-4 0.0 0.07667833808039352 2.452959250039247E-4 74-75 1.401691000022427E-4 6.424417083436124E-4 0.0 0.07904953202209812 2.452959250039247E-4 76-77 1.401691000022427E-4 6.716436041774129E-4 0.0 0.08155505468463822 2.452959250039247E-4 78-79 1.401691000022427E-4 6.774839833441731E-4 0.0 0.08309691478466288 2.452959250039247E-4 80-81 1.401691000022427E-4 6.774839833441731E-4 0.0 0.08358750663467074 2.5697668333744497E-4 82-83 1.401691000022427E-4 6.833243625109332E-4 0.0 0.08394961014300986 3.036997166715259E-4 84-85 1.401691000022427E-4 6.950051208444534E-4 0.0 0.08420074644718054 3.036997166715259E-4 86-87 1.401691000022427E-4 7.008455000112135E-4 0.0 0.0843233944096825 3.036997166715259E-4 88 1.401691000022427E-4 7.125262583447337E-4 0.0 0.0843233944096825 3.036997166715259E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8020 0.0 44.9971 1 GTATCAA 13475 0.0 34.26325 1 CTTATAC 6405 0.0 32.900517 1 TCAACGC 14835 0.0 30.276295 4 ATCAACG 15290 0.0 29.31873 3 CAACGCA 15380 0.0 29.231567 5 AACGCAG 15915 0.0 28.247927 6 TATCAAC 16690 0.0 27.170511 2 ACGCAGA 18890 0.0 23.821905 7 TATACAC 10205 0.0 23.744768 3 CGCAGAG 19295 0.0 23.254612 8 TTATACA 10120 0.0 22.233902 2 GTACATG 19260 0.0 21.725164 1 TACATGG 19595 0.0 20.890015 2 ACATGGG 20100 0.0 19.676281 3 ACATCTC 11030 0.0 19.574928 8 ACACATC 11020 0.0 19.396482 6 TATGCCG 6000 0.0 18.566214 42-43 GCAGAGT 24530 0.0 18.362352 9 CATGGGG 14570 0.0 18.294226 4 >>END_MODULE