##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139736_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 15951494 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.3629013056708 34.0 31.0 34.0 31.0 34.0 2 32.49593567850134 34.0 31.0 34.0 31.0 34.0 3 32.563806374500096 34.0 31.0 34.0 31.0 34.0 4 36.100018970009955 37.0 35.0 37.0 35.0 37.0 5 36.004168386986194 37.0 35.0 37.0 35.0 37.0 6 36.02158857345901 37.0 35.0 37.0 35.0 37.0 7 35.93471138189313 37.0 35.0 37.0 35.0 37.0 8 35.906507377929614 37.0 35.0 37.0 35.0 37.0 9 37.597860614184476 39.0 37.0 39.0 35.0 39.0 10-11 37.490390053746694 39.0 37.0 39.0 35.0 39.0 12-13 37.45088942766113 39.0 37.0 39.0 34.0 39.0 14-15 38.67302460822792 40.0 38.0 41.0 34.0 41.0 16-17 38.703107840557124 40.0 38.0 41.0 34.0 41.0 18-19 38.69209304156714 40.0 38.0 41.0 34.0 41.0 20-21 38.67429416761847 40.0 38.0 41.0 34.0 41.0 22-23 38.570416600951404 40.0 38.0 41.0 34.0 41.0 24-25 38.48086104495932 40.0 38.0 41.0 34.0 41.0 26-27 38.31516428887758 40.0 38.0 41.0 34.0 41.0 28-29 38.143875449070045 40.0 38.0 41.0 33.0 41.0 30-31 38.01525137591928 40.0 37.5 41.0 33.0 41.0 32-33 38.220779565032046 40.0 38.0 41.0 34.0 41.0 34-35 38.183105482240215 40.0 38.0 41.0 33.0 41.0 36-37 38.07974246952987 40.0 38.0 41.0 33.0 41.0 38-39 37.92023753240292 40.0 37.0 41.0 33.0 41.0 40-41 37.90199516739614 40.0 37.0 41.0 33.0 41.0 42-43 37.81858697687453 40.0 37.0 41.0 33.0 41.0 44-45 37.845938718183916 40.0 37.0 41.0 33.0 41.0 46-47 37.956987166644595 40.0 37.0 41.0 33.0 41.0 48-49 37.913913415361534 40.0 37.0 41.0 33.0 41.0 50-51 37.74765761781015 40.0 37.0 41.0 32.5 41.0 52-53 37.63436783643536 40.0 36.5 41.0 32.0 41.0 54-55 37.54047173787808 39.5 36.0 41.0 32.0 41.0 56-57 37.35910763802747 39.0 36.0 41.0 32.0 41.0 58-59 37.23372894972068 39.0 35.5 41.0 31.0 41.0 60-61 36.991182479553046 39.0 35.0 40.5 31.0 41.0 62-63 36.77449110504449 38.5 35.0 40.0 31.0 41.0 64-65 36.55939156298309 38.0 35.0 40.0 31.0 41.0 66-67 36.27946191417819 37.5 35.0 40.0 31.0 41.0 68-69 35.97191675554525 37.0 34.5 40.0 30.0 41.0 70-71 35.66463892241425 36.5 34.0 39.0 30.0 41.0 72-73 35.33936043493959 36.0 34.0 39.0 30.0 40.0 74-75 34.937100865328865 35.5 34.0 38.5 29.0 40.0 76-77 33.934821985585806 35.0 32.5 37.0 28.5 39.0 78-79 34.22568057188411 35.0 33.0 37.0 29.0 39.0 80-81 34.10305359189759 35.0 33.0 36.5 29.0 39.0 82-83 33.85559277584444 35.0 33.0 36.0 29.0 37.5 84-85 33.61144951108825 35.0 33.0 36.0 29.0 37.0 86-87 33.40187048225138 35.0 33.0 35.0 29.0 37.0 88-89 33.17225931684953 35.0 33.0 35.0 29.0 36.0 90-91 33.051165392155184 35.0 33.0 35.0 29.0 36.0 92-93 32.96744514935258 34.0 33.0 35.0 29.0 36.0 94-95 32.92169151529732 34.0 32.0 35.0 29.0 35.5 96-97 32.88182500314045 34.0 32.0 35.0 29.0 35.0 98-99 32.97919953809644 34.0 32.0 35.0 29.0 35.0 100-101 32.17751596692494 33.5 30.5 35.0 27.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 0.0 19 23.0 20 111.0 21 669.0 22 3126.0 23 10043.0 24 24887.0 25 51317.0 26 91892.0 27 144871.0 28 204681.0 29 272420.0 30 342875.0 31 425613.0 32 528356.0 33 672739.0 34 904640.0 35 1274557.0 36 2015409.0 37 3440036.0 38 3993497.0 39 1499236.0 40 50494.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 36.76051910874305 22.169120961334404 16.13609985371903 24.934260076203522 2 13.547409938466428 22.348744989093472 40.538251839722456 23.565593232717642 3 15.95830273005868 27.66127497358861 33.005064366554215 23.37535792979849 4 11.920707865984214 20.62492077544586 38.259620070696826 29.1947512878731 5 12.612498866877297 38.21245834402721 36.13570616018788 13.039336628907611 6 28.191453414959128 39.05813461735935 19.143529753388616 13.606882214292906 7 24.74402084218569 33.29211044432578 23.29134813328457 18.67252058020396 8 24.88930503939004 35.95063885552037 21.669406013004174 17.49065009208542 9 24.92504463845205 16.299971651558153 20.67227684127894 38.102706868710854 10-11 23.60579203427591 26.654785438906224 29.33715174265182 20.402270784166046 12-13 24.73103773226508 24.228348140932752 28.659666611791973 22.380947515010195 14-15 22.241687140198188 25.749049148386767 25.706325866737213 26.30293784467783 16-17 22.188960619548276 29.140742499777296 26.3140133653947 22.356283515279728 18-19 22.18876380362204 27.663511608284235 27.653390286897928 22.494334301195792 20-21 23.02896647606625 26.984736805000477 27.400499650184685 22.58579706874859 22-23 22.673298898673394 27.813153297692267 27.25196684724218 22.26158095639216 24-25 22.90754496941144 28.012194339802825 27.2445926075304 21.83566808325533 26-27 22.8503131164625 28.10235904031495 27.26821873005606 21.779109113166488 28-29 22.239232910023233 27.214420866343175 27.618401926458034 22.927944297175554 30-31 23.180863087542214 27.336094074254152 27.607411305114233 21.8756315330894 32-33 23.05262089510462 27.457610236395446 27.826023641120962 21.663745227378968 34-35 22.625534851813782 27.690203233732035 28.044941934980557 21.639319979473626 36-37 22.82122676946255 27.234457438978488 27.643171274720107 22.301144516838853 38-39 22.27533961501495 26.87516207003468 28.1825384527863 22.666959862164074 40-41 22.2529036781875 26.74899187808906 28.445924521928966 22.552179921794473 42-43 22.509321633390726 26.713851923988745 28.468420660033072 22.30840578258745 44-45 22.10671107760475 27.19166108997047 28.183591030386413 22.51803680203837 46-47 22.818854941395696 26.72652939814131 27.465329125118366 22.989286535344633 48-49 22.420250469708158 26.826881611131615 27.850687848391882 22.902180070768352 50-51 22.219808615279987 27.22550179917358 27.863008272925484 22.691681312620958 52-53 22.24893777212089 27.45010893604245 28.118733688947557 22.1822196028891 54-55 22.160171297224508 27.482790809521813 27.66608674788354 22.690951145370136 56-57 22.58966630227465 27.72543819712717 27.149110652200154 22.53578484839803 58-59 22.087854271863016 27.951190288174022 27.817694033153213 22.143261406809753 60-61 22.581124797715322 28.235017079816227 27.056896284916576 22.126961837551878 62-63 22.171807634932676 28.550522392691153 27.061799745460473 22.215870226915698 64-65 22.228028460863058 28.26939755141004 27.104620155451336 22.397953832275565 66-67 22.37241725755933 27.999356481026133 27.12302051180899 22.50520574960555 68-69 22.39707984902079 27.727057540740297 27.240536171972472 22.635326438266443 70-71 22.42560900042445 27.506315683344745 27.32653388020077 22.741541436030033 72-73 22.41563236982225 27.599701220376428 27.233117569397614 22.751548840403707 74-75 22.35812915564824 27.652083007114058 27.23982263913983 22.749965198097872 76-77 22.477834570529758 27.644245021697788 27.2108877852911 22.667032622481354 78-79 22.454214749150932 27.664162215903648 27.142122004992075 22.73950102995335 80-81 22.47197768367143 27.678270496063966 27.17033292924638 22.679418891018223 82-83 22.455260975988654 27.681316446417814 27.257047886922024 22.606374690671508 84-85 22.485864367077586 27.71411146058148 27.266255192023948 22.53376898031699 86-87 22.353623187484065 27.735706272746256 27.35030925650048 22.56036128326919 88-89 22.391364635194826 27.729684257843708 27.30855373912287 22.570397367838595 90-91 22.425758390851243 27.735873032356366 27.37533370552666 22.463034871265723 92-93 22.41064744161268 27.722301742148925 27.384941141690415 22.482109674547974 94-95 22.279311652503036 27.75928804928848 27.45601703305973 22.505383265148755 96-97 22.162032831321287 27.821839037706354 27.577296089648364 22.438832041324 98-99 22.290044544809565 28.407212180434737 27.66715608228151 21.635587192474183 100-101 21.769847550483824 31.616867807474325 25.21513850315519 21.398146138886666 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1368.0 1 1402.5 2 2355.0 3 3470.0 4 4524.0 5 6545.5 6 8115.0 7 9316.0 8 10097.5 9 10065.5 10 9690.0 11 9532.0 12 11309.0 13 16176.5 14 27355.0 15 42425.5 16 54075.5 17 60131.5 18 61676.0 19 59343.5 20 53792.5 21 47196.5 22 43093.5 23 44793.5 24 52876.5 25 68049.0 26 90268.0 27 116630.0 28 147758.0 29 183511.5 30 219963.5 31 259061.0 32 300862.0 33 343679.5 34 386204.0 35 425521.5 36 467751.0 37 505697.5 38 535493.0 39 562579.0 40 588881.0 41 612925.5 42 629777.0 43 644916.5 44 658963.5 45 666879.0 46 670100.0 47 681223.5 48 735496.0 49 747397.5 50 705176.0 51 702522.5 52 695658.5 53 649068.5 54 589224.0 55 530985.0 56 476660.0 57 429996.0 58 383335.5 59 333134.0 60 282948.5 61 235950.0 62 188649.0 63 146675.5 64 110384.5 65 81524.0 66 61807.5 67 45989.0 68 34022.5 69 25176.0 70 17708.0 71 12400.5 72 8620.5 73 5912.5 74 4089.0 75 2763.0 76 1872.5 77 1294.0 78 918.0 79 667.0 80 495.0 81 358.0 82 272.5 83 202.0 84 154.0 85 116.0 86 83.5 87 67.5 88 54.0 89 41.5 90 31.0 91 22.0 92 16.5 93 11.0 94 6.5 95 5.0 96 5.0 97 4.5 98 2.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 2.444912056513327E-4 3 2.63298221470666E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 2.5076021092444386E-5 16-17 6.269005273111096E-6 18-19 1.2224560282566636E-4 20-21 0.0 22-23 7.83788101820721E-5 24-25 0.0017719458631336473 26-27 0.002978311303140182 28-29 0.0028837231919762382 30-31 0.004384465818732784 32-33 0.002036192791020175 34-35 0.005923393142114149 36-37 0.021535689207598047 38-39 0.009426899706180067 40-41 0.003743178562255058 42-43 0.0074942999928605735 44-45 0.004419379717164244 46-47 0.0035659349051996208 48-49 0.0023104189976163136 50-51 7.966666934435194E-5 52-53 5.678707419298052E-5 54-55 0.002773822885390413 56-57 0.0026035405503816835 58-59 0.004159048173881266 60-61 0.0018460019459561976 62-63 0.0012321132250448154 64-65 3.149443017463662E-4 66-67 7.166130431098283E-5 68-69 9.42975411662263E-5 70-71 1.5742048883308476E-4 72-73 0.001027155250673544 74-75 0.002722174870052508 76-77 0.0031131124371138116 78-79 0.0011823110302966251 80-81 0.005690734953231842 82-83 0.004037048369784305 84-85 0.006639880315567974 86-87 0.003175898720709042 88-89 0.05472147762240594 90-91 0.0 92-93 1.5751511450789232E-4 94-95 0.0015060807694663681 96-97 0.023773500546340816 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 574.0 20-21 1921.0 22-23 4047.0 24-25 8864.0 26-27 15501.0 28-29 16938.0 30-31 31563.0 32-33 40770.0 34-35 56133.0 36-37 85053.0 38-39 82292.0 40-41 85886.0 42-43 97411.0 44-45 112199.0 46-47 113174.0 48-49 110925.0 50-51 97713.0 52-53 91255.0 54-55 125883.0 56-57 154607.0 58-59 145554.0 60-61 155423.0 62-63 151608.0 64-65 154567.0 66-67 192563.0 68-69 129660.0 70-71 126050.0 72-73 123714.0 74-75 126219.0 76-77 127177.0 78-79 137796.0 80-81 144595.0 82-83 141841.0 84-85 144922.0 86-87 155934.0 88-89 167639.0 90-91 182966.0 92-93 201130.0 94-95 266809.0 96-97 377643.0 98-99 1423461.0 100-101 9841514.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 81.7070727501923 #Duplication Level Percentage of deduplicated Percentage of total 1 87.25696510314555 71.29511195643703 2 8.817301301355258 14.408717577803987 3 2.1645709679192553 5.305822726461981 4 0.8083037749369066 2.6417654137209956 5 0.37026185494672503 1.5126506159376605 6 0.18751087039359285 0.9192578597220702 7 0.10735720463267197 0.6140290050425308 8 0.07312042728970175 0.47795648576678457 9 0.047970106504171675 0.35275472837737454 >10 0.16175094759771141 2.07725460355218 >50 0.003824914428545415 0.20936553154714205 >100 9.766951392623459E-4 0.12673085692454109 >500 7.153473685995426E-5 0.0430110141971029 >1k 1.4296973808980244E-5 0.015571624508642178 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.5076021092444382E-5 0.0 2 0.0 1.2538010546222191E-5 0.0 6.269005273111095E-5 0.0 3 0.0 1.2538010546222191E-5 0.0 1.0030408436977753E-4 0.0 4 0.0 6.895905800422205E-5 0.0 2.444912056513327E-4 6.2690052731110956E-6 5 0.0 6.895905800422205E-5 0.0 3.0091225310933256E-4 6.2690052731110956E-6 6 0.0 6.895905800422205E-5 0.0 3.1971926892866584E-4 6.2690052731110956E-6 7 0.0 6.895905800422205E-5 0.0 3.5106429529422137E-4 6.2690052731110956E-6 8 0.0 8.149706855044423E-5 0.0 4.200233532984434E-4 6.2690052731110956E-6 9 0.0 1.0657308964288862E-4 0.0 8.901987487817755E-4 6.2690052731110956E-6 10-11 0.0 1.0657308964288862E-4 0.0 0.0012757425730781078 6.2690052731110956E-6 12-13 0.0 1.0657308964288862E-4 0.0 0.0013948536732672188 6.2690052731110956E-6 14-15 0.0 1.4105261864499964E-4 0.0 0.0015076957681832185 9.403507909666644E-6 16-17 0.0 1.5985963446433292E-4 0.0 0.0016738244079206625 1.2538010546222191E-5 18-19 0.0 1.9433916346644396E-4 0.0 0.001836818545021551 1.2538010546222191E-5 20-21 0.0 2.3195319510511053E-4 0.0 0.002031157708487995 1.2538010546222191E-5 22-23 0.0 2.695672267437771E-4 0.0 0.0022913214273221055 1.5672513182777738E-5 24-25 9.403507909666644E-6 2.852397399265548E-4 0.0 0.002639251219979771 1.8807015819333285E-5 26-27 1.2538010546222191E-5 2.97777750472777E-4 0.0 0.0032003271919232145 1.8807015819333285E-5 28-29 1.2538010546222191E-5 3.0718125838244365E-4 0.0 0.004939976155211544 2.1941518455888835E-5 30-31 2.821052372899993E-5 3.5733330056733246E-4 0.0 0.010368934721725752 2.5076021092444382E-5 32-33 3.1345026365555476E-5 3.6360230584044355E-4 0.0 0.022527670448924723 3.1345026365555476E-5 34-35 3.761403163866658E-5 4.137543480253323E-4 0.0 0.041933376271840114 5.328654482144431E-5 36-37 4.388303691177767E-5 4.733098981198877E-4 0.0 0.06946057842607094 5.9555550094555405E-5 38-39 4.388303691177767E-5 4.795789033929988E-4 0.0 0.11104289040261683 6.58245553676665E-5 40-41 4.388303691177767E-5 5.015204218488876E-4 0.0 0.16314772773007968 7.209356064077759E-5 42-43 5.0152042184888765E-5 5.077894271219987E-4 0.0 0.20073354884501726 7.522806327733314E-5 44-45 5.328654482144431E-5 5.61075971943443E-4 0.0 0.2505219887240656 7.522806327733314E-5 46-47 6.269005273111095E-5 6.080935114917762E-4 0.0 0.30206261557694847 7.522806327733314E-5 48-49 6.895905800422205E-5 6.080935114917762E-4 0.0 0.3441871965096185 9.403507909666644E-5 50-51 6.895905800422205E-5 6.770525694959984E-4 0.0 0.3860986312630027 9.403507909666644E-5 52-53 6.895905800422205E-5 6.833215747691094E-4 0.0 0.4266590953800315 9.403507909666644E-5 54-55 6.895905800422205E-5 6.895905800422205E-4 0.0 0.5014514627908835 1.0343858700633308E-4 56-57 6.895905800422205E-5 7.021285905884427E-4 0.0 0.5562801829095131 1.2851460809877745E-4 58-59 6.895905800422205E-5 7.334736169539982E-4 0.0 0.5980568340495254 1.3478361337188855E-4 60-61 6.895905800422205E-5 7.648186433195537E-4 0.0 0.6216157558658769 1.4418712128155519E-4 62-63 6.895905800422205E-5 7.773566538657759E-4 0.0 0.6356395206618264 1.5672513182777737E-4 64-65 6.895905800422205E-5 8.964677540548866E-4 0.0 0.6460460694151908 1.5985963446433292E-4 66-67 6.895905800422205E-5 9.027367593279977E-4 0.0 0.6515972735845307 1.6299413710088847E-4 68-69 7.522806327733314E-5 9.21543775147331E-4 0.0 0.6564714251843746 1.6299413710088847E-4 70-71 7.522806327733314E-5 9.434852936032198E-4 0.0 0.6615681264714139 1.6299413710088847E-4 72-73 7.522806327733314E-5 9.56023304149442E-4 0.0 0.6654611787460158 1.7553214764711068E-4 74-75 7.522806327733314E-5 9.84233827878442E-4 0.0 0.6693416930100716 1.7553214764711068E-4 76-77 7.522806327733314E-5 0.0010406548753364418 0.0 0.6729181605183816 1.7866665028366623E-4 78-79 7.522806327733314E-5 0.0010625963937923306 0.0 0.6760401251443908 1.8180115292022178E-4 80-81 7.522806327733314E-5 0.0010657308964288862 0.0 0.6775917039494859 1.8180115292022178E-4 82-83 7.522806327733314E-5 0.0010782689069751084 0.0 0.6785790722800009 1.8180115292022178E-4 84-85 7.522806327733314E-5 0.001115882938613775 0.0 0.6795131540656945 1.8180115292022178E-4 86-87 7.522806327733314E-5 0.0011346899544331082 0.0 0.6796918207159781 1.8493565555677732E-4 88-89 7.522806327733314E-5 0.0011785729913448859 0.0 0.6797545107687092 1.8807015819333287E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 18005 0.0 52.23712 1 CTTATAC 35885 0.0 43.78998 1 TATACAC 43305 0.0 38.11644 3 TTATACA 42700 0.0 37.5232 2 GTATCAA 30265 0.0 33.31239 1 TACACAT 54195 0.0 30.338741 5 ACACATC 56900 0.0 27.902878 6 ATACACA 64015 0.0 26.902397 4 ACATCTC 58965 0.0 26.896643 8 TCAACGC 37135 0.0 26.272959 4 ATCAACG 37560 0.0 26.04409 3 CACATCT 61640 0.0 25.576544 7 CAACGCA 38510 0.0 25.346 5 TATCAAC 39880 0.0 24.81903 2 AACGCAG 39605 0.0 24.666862 6 CATCTCC 66655 0.0 23.620083 9 ACGCAGA 46515 0.0 21.039328 7 CGCAGAG 47385 0.0 20.625925 8 GTACATG 47980 0.0 19.022308 1 TACATGG 48570 0.0 18.482605 2 >>END_MODULE