##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139582_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8218256 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.79878845341396 33.0 31.0 33.0 25.0 34.0 2 32.08621233020728 33.0 31.0 33.0 29.0 34.0 3 32.153657783354525 33.0 31.0 33.0 30.0 34.0 4 32.82676835571927 33.0 33.0 34.0 31.0 34.0 5 32.944743385944655 33.0 33.0 34.0 31.0 34.0 6 36.59025941756986 38.0 37.0 38.0 34.0 38.0 7 37.09054694816029 38.0 38.0 38.0 36.0 38.0 8 36.99341344440962 38.0 38.0 38.0 36.0 38.0 9 37.16883241407909 38.0 38.0 38.0 36.0 38.0 10-11 37.30321500084689 38.0 38.0 38.0 36.5 38.0 12-13 37.3127298541199 38.0 38.0 38.0 37.0 38.0 14-15 37.39092375559973 38.0 38.0 38.0 37.0 38.0 16-17 37.40364908321182 38.0 38.0 38.0 37.0 38.0 18-19 37.41565594938878 38.0 38.0 38.0 37.0 38.0 20-21 37.43047258638762 38.0 38.0 38.0 37.0 38.0 22-23 37.44369054697551 38.0 38.0 38.0 37.0 38.0 24-25 37.45938221107048 38.0 38.0 38.0 37.0 38.0 26-27 37.435157829177136 38.0 38.0 38.0 37.0 38.0 28-29 37.412418003076375 38.0 38.0 38.0 37.0 38.0 30-31 37.41835383542342 38.0 38.0 38.0 37.0 38.0 32-33 37.40730658811523 38.0 38.0 38.0 37.0 38.0 34-35 37.383701777186715 38.0 38.0 38.0 37.0 38.0 36-37 37.368606074653954 38.0 38.0 38.0 37.0 38.0 38-39 37.35466342268053 38.0 38.0 38.0 37.0 38.0 40-41 37.3478576306225 38.0 38.0 38.0 37.0 38.0 42-43 37.32194082087635 38.0 38.0 38.0 37.0 38.0 44-45 37.288924399172075 38.0 38.0 38.0 37.0 38.0 46-47 37.25441684535568 38.0 38.0 38.0 37.0 38.0 48-49 37.202470404713935 38.0 38.0 38.0 37.0 38.0 50-51 37.128995392059956 38.0 38.0 38.0 36.0 38.0 52-53 37.15026412349593 38.0 38.0 38.0 36.0 38.0 54-55 37.12872553889467 38.0 38.0 38.0 36.0 38.0 56-57 37.07783613227443 38.0 38.0 38.0 36.0 38.0 58-59 37.06204220238506 38.0 38.0 38.0 36.0 38.0 60-61 37.07885199413962 38.0 38.0 38.0 36.0 38.0 62-63 37.076852095576086 38.0 38.0 38.0 36.0 38.0 64-65 37.01680357559457 38.0 38.0 38.0 36.0 38.0 66-67 37.05357238826174 38.0 38.0 38.0 36.0 38.0 68-69 37.06229964719651 38.0 38.0 38.0 36.0 38.0 70-71 37.04108376486419 38.0 38.0 38.0 36.0 38.0 72-73 37.028960836659614 38.0 38.0 38.0 36.0 38.0 74-75 36.98395678848016 38.0 38.0 38.0 36.0 38.0 76-77 36.985514176574114 38.0 38.0 38.0 36.0 38.0 78-79 36.979754569271606 38.0 38.0 38.0 36.0 38.0 80-81 36.9735938204973 38.0 38.0 38.0 36.0 38.0 82-83 36.91858897066321 38.0 38.0 38.0 35.0 38.0 84-85 36.89981741638927 38.0 38.0 38.0 35.0 38.0 86-87 36.86657441715683 38.0 38.0 38.0 35.0 38.0 88-89 36.87082738448824 38.0 38.0 38.0 35.0 38.0 90-91 36.85385744729872 38.0 38.0 38.0 35.0 38.0 92-93 36.828508625069944 38.0 38.0 38.0 35.0 38.0 94-95 36.81230512394637 38.0 38.0 38.0 35.0 38.0 96-97 36.793436754455676 38.0 38.0 38.0 35.0 38.0 98-99 36.82800404539613 38.0 38.0 38.0 35.0 38.0 100 35.32701935913011 38.0 35.0 38.0 29.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 2.0 20 25.0 21 76.0 22 380.0 23 1257.0 24 3103.0 25 6518.0 26 11741.0 27 19404.0 28 30622.0 29 45589.0 30 62651.0 31 82894.0 32 109077.0 33 146470.0 34 217209.0 35 383135.0 36 1045826.0 37 6052274.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.557259837123596 19.378624856660586 14.046836701120045 25.01727860509578 2 14.801633909462296 19.856516971134493 42.305261385114036 23.036587734289174 3 18.717749066611276 24.699431369965076 29.4918104060355 27.091009157388147 4 13.027370935612392 17.204699349970547 37.97555024839251 31.79237946602455 5 14.295003708816079 36.33470410267093 34.900433863340346 14.469858325172641 6 31.333363185571244 36.38720915970493 18.242824268311914 14.036603386411912 7 27.741974421871085 31.883943343749653 22.09735157108138 18.27673066329788 8 24.739166071244313 36.313105846301205 20.557585453653427 18.39014262880105 9 25.681531458742583 17.119459408419498 20.986167868219244 36.212841264618675 10-11 24.72317727751484 26.31634984356778 28.11527774262569 20.84519513629169 12-13 25.527319908262776 23.77408296845462 28.354519499027532 22.344077624255075 14-15 22.651442106451782 25.1184375371125 26.09797626163021 26.132144094805515 16-17 22.33318115181615 28.293277795191585 26.80898477730555 22.564556275686716 18-19 22.337658987502945 27.419911231774723 28.542594681888712 21.699835098833624 20-21 23.067789898060198 26.518865078199926 28.504723304297343 21.908621719442532 22-23 22.80473457316095 26.421699587494828 28.3704999297848 22.403065909559416 24-25 22.576356049967984 26.524320396729628 28.46867185961171 22.43065169369068 26-27 22.489328280494853 26.699509061954878 28.43850762429121 22.372655033259058 28-29 22.4194969797061 26.6728624535316 28.519033233216952 22.38860733354535 30-31 22.66463429905529 26.604564649393126 28.38432442027524 22.346476631276342 32-33 22.478571250622213 26.70315631666335 28.372081833471498 22.44619059924294 34-35 22.640065141892958 26.699475586699208 28.3633332061828 22.29712606522504 36-37 22.58261152582879 26.641493684370015 28.330134463187584 22.445760326613605 38-39 22.436583135961815 26.699300900783264 28.46410429006444 22.400011673190484 40-41 22.691124298057282 26.589578866726832 28.32984425719888 22.389452578017004 42-43 22.582600854557356 26.655760452903248 28.17114718835801 22.590491504181387 44-45 22.583921561302255 26.74563233791463 28.111829869427023 22.558616231356094 46-47 22.688873067961975 26.74334354873974 27.84712697584199 22.7206564074563 48-49 22.69299574377504 26.779724508945662 27.798647922910448 22.728631824368847 50-51 22.59035627688771 27.016717985892065 27.713974748855914 22.67895098836431 52-53 22.762061202271212 26.91568714582412 27.633445327349413 22.68880632455525 54-55 22.742638591549223 26.85616652155059 27.612865112000595 22.78832977489959 56-57 22.739355087731862 26.9960134842519 27.57778215492034 22.686849273095895 58-59 22.67970162158864 26.970567184717076 27.661773841966593 22.68795735172769 60-61 22.768831532549886 26.994126357973652 27.607925254906945 22.62911685456952 62-63 22.70644900115292 27.097729831800255 27.60760201761901 22.588219149427815 64-65 22.697237494738545 26.97684534236609 27.61793563604841 22.70798152684695 66-67 22.733312570794745 26.976355471632225 27.49364568086853 22.7966862767045 68-69 22.647497426243778 26.94521988069727 27.663846417391397 22.743436275667552 70-71 22.69215717485451 26.757170016469793 27.729503541467626 22.82116926720807 72-73 22.75909519889202 26.78376374661473 27.58957762119164 22.867563433301612 74-75 22.642678403148018 26.950979746924936 27.54790817471715 22.858433675209895 76-77 22.79120219406307 26.857278204624365 27.483617738306908 22.86790186300566 78-79 22.713864004375413 26.864744619464105 27.450517918204387 22.970873457956092 80-81 22.740759152446707 26.9418041318334 27.424694684187052 22.89274203153284 82-83 22.86241979106873 26.929918638514323 27.442602640864795 22.765058929552154 84-85 22.886750901315267 26.90951168117408 27.36349019745395 22.840247220056703 86-87 22.768846673183 26.941588768678233 27.441705581393787 22.84785897674498 88-89 22.81909679666483 26.957147352710255 27.374205458462765 22.849550392162158 90-91 22.900644898053116 26.93459308789453 27.35681518572112 22.80794682833123 92-93 22.9006387702394 26.979153234371054 27.351717475417576 22.768490519971973 94-95 22.774137037235658 27.01102947748521 27.357307004006202 22.857526481272927 96-97 22.925168009329035 27.119713834365296 27.352164904359267 22.602953251946406 98-99 24.012713384849228 29.010430353577377 27.597561390841857 19.37929487073154 100 22.910364132719284 29.841921223907207 21.42720810025544 25.82050654311806 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1796.0 1 1600.5 2 1729.0 3 2245.0 4 2759.5 5 3740.0 6 4826.0 7 6372.0 8 8324.5 9 9536.5 10 9505.0 11 9309.5 12 10294.0 13 12897.5 14 17992.5 15 23940.0 16 28373.0 17 30704.0 18 30260.0 19 27626.5 20 24543.0 21 22059.5 22 21475.0 23 24069.0 24 29778.5 25 38497.0 26 50603.0 27 64199.5 28 77988.0 29 94395.5 30 111487.5 31 128174.0 32 147582.0 33 167222.5 34 186050.5 35 204581.5 36 224894.0 37 242781.5 38 256295.0 39 270234.5 40 283801.0 41 295778.5 42 304549.0 43 315927.5 44 328930.0 45 338334.0 46 344329.5 47 348362.0 48 352318.0 49 354766.5 50 354686.0 51 350733.0 52 343448.0 53 330824.0 54 314294.5 55 296089.0 56 274242.0 57 249734.0 58 223492.0 59 195385.0 60 165826.5 61 135889.5 62 108808.0 63 85309.0 64 64356.5 65 47860.0 66 35589.5 67 27063.0 68 20761.5 69 15507.5 70 11452.0 71 8213.5 72 5670.5 73 3757.5 74 2395.5 75 1477.0 76 954.0 77 592.5 78 377.0 79 254.5 80 176.5 81 120.5 82 86.0 83 61.5 84 43.5 85 32.0 86 23.5 87 19.0 88 14.0 89 9.0 90 5.0 91 3.0 92 2.0 93 1.5 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.005110573338187567 3 0.0010099466358799239 4 1.581844128486628E-4 5 0.0 6 0.0 7 7.665860007281351E-4 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 6.084105457016708E-6 22-23 7.666418785792593E-4 24-25 6.145771368542802E-4 26-27 1.0954079646139411E-4 28-29 0.002982947402845099 30-31 0.0022972684929199647 32-33 0.004841903308839489 34-35 0.010370979232879359 36-37 0.0014997840372452927 38-39 0.0 40-41 1.3066906981604843E-4 42-43 8.266326511505632E-4 44-45 1.956268562858853E-4 46-47 3.820111460665458E-5 48-49 0.00441256436274285 50-51 0.003490306467039268 52-53 4.501749027361239E-4 54-55 0.0028400044072660986 56-57 0.04194990698496446 58-59 0.0636102543420651 60-61 0.030122023528355062 62-63 0.011130836558182148 64-65 9.118974089360735E-4 66-67 2.0753271822480387E-4 68-69 0.001480472773616858 70-71 0.011198177489561825 72-73 0.016660542374701152 74-75 0.01036673157069202 76-77 0.012501295269064638 78-79 0.002548208181285974 80-81 0.013920270724857048 82-83 0.044960972322297336 84-85 0.024705340176923718 86-87 0.003929139043397797 88-89 9.999907693159756E-5 90-91 7.774726370449073E-6 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 60.0 20-21 371.0 22-23 682.0 24-25 723.0 26-27 2057.0 28-29 5212.0 30-31 15641.0 32-33 20223.0 34-35 28345.0 36-37 44969.0 38-39 51894.0 40-41 50391.0 42-43 57770.0 44-45 69034.0 46-47 69836.0 48-49 64866.0 50-51 58543.0 52-53 56659.0 54-55 62714.0 56-57 63978.0 58-59 63673.0 60-61 62305.0 62-63 60263.0 64-65 63625.0 66-67 67438.0 68-69 68606.0 70-71 69874.0 72-73 63056.0 74-75 63705.0 76-77 66371.0 78-79 68315.0 80-81 67352.0 82-83 63890.0 84-85 63335.0 86-87 65451.0 88-89 68602.0 90-91 68749.0 92-93 67925.0 94-95 80092.0 96-97 255793.0 98-99 563693.0 100-101 5412175.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 87.10109415910217 #Duplication Level Percentage of deduplicated Percentage of total 1 91.01087554754285 79.27146840568861 2 6.479703182381513 11.287784740232922 3 1.4530343881687173 3.796826551808905 4 0.49282170266411507 1.7170123810958455 5 0.21366761218861385 0.9305341403995492 6 0.12014807872832267 0.6279017471010512 7 0.06360843038071307 0.3878254718732229 8 0.04156057799836439 0.28959774540337974 9 0.026495839883326707 0.20770349800519208 >10 0.09585304791442821 1.2951064447934035 >50 0.0016954893209685943 0.10183312992305836 >100 4.932213171902472E-4 0.06319255811737855 >500 4.288151086465225E-5 0.02321318555746715 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.433606351517889E-5 2 1.2168031757589445E-5 2.433606351517889E-5 0.0 0.0 2.433606351517889E-5 3 1.2168031757589445E-5 2.433606351517889E-5 0.0 0.0 2.433606351517889E-5 4 1.2168031757589445E-5 4.867212703035778E-5 0.0 1.2168031757589445E-5 2.433606351517889E-5 5 1.2168031757589445E-5 6.084015878794722E-5 0.0 2.433606351517889E-5 2.433606351517889E-5 6 1.2168031757589445E-5 6.084015878794722E-5 0.0 2.433606351517889E-5 2.433606351517889E-5 7 1.2168031757589445E-5 7.300819054553667E-5 0.0 2.433606351517889E-5 2.433606351517889E-5 8 1.2168031757589445E-5 9.734425406071556E-5 0.0 3.6504095272768334E-5 3.6504095272768334E-5 9 1.2168031757589445E-5 1.2168031757589444E-4 0.0 3.6504095272768334E-5 7.300819054553667E-5 10-11 1.2168031757589445E-5 1.2168031757589444E-4 0.0 1.0951228581830501E-4 7.909220642433138E-5 12-13 1.2168031757589445E-5 1.2168031757589444E-4 0.0 1.0951228581830501E-4 9.126023818192085E-5 14-15 1.2168031757589445E-5 2.2510858751540472E-4 0.0 1.1559630169709973E-4 1.0951228581830501E-4 16-17 1.2168031757589445E-5 2.5552866690937835E-4 0.0 1.338483493334839E-4 1.0951228581830501E-4 18-19 1.2168031757589445E-5 2.737807145457625E-4 0.0 1.338483493334839E-4 1.0951228581830501E-4 20-21 1.2168031757589445E-5 2.9203276218214667E-4 0.0 1.5210039696986807E-4 1.0951228581830501E-4 22-23 1.2168031757589445E-5 3.224528415761203E-4 0.0 2.0077252400022585E-4 1.2168031757589446E-4 24-25 1.2168031757589445E-5 3.4070488921250446E-4 0.0 2.3727661927299418E-4 1.338483493334839E-4 26-27 1.2168031757589445E-5 3.528729209700939E-4 0.0 3.4678890509129916E-4 1.338483493334839E-4 28-29 1.2168031757589445E-5 3.528729209700939E-4 0.0 6.814097784250089E-4 1.338483493334839E-4 30-31 1.2168031757589445E-5 3.9546103212165695E-4 0.0 0.001861708858911185 1.399323652122786E-4 32-33 1.2168031757589445E-5 4.0762906387924636E-4 0.0 0.004325735289823047 1.7035244460625223E-4 34-35 1.2168031757589445E-5 4.8672127030357777E-4 0.0 0.007221726848129335 1.7035244460625223E-4 36-37 1.2168031757589445E-5 5.597294608491144E-4 0.0 0.0116448063920131 1.7035244460625223E-4 38-39 1.2168031757589445E-5 5.779815084854987E-4 0.0 0.018209459525232605 1.7035244460625223E-4 40-41 1.2168031757589445E-5 6.814097784250089E-4 0.0 0.025552866690937835 1.7035244460625223E-4 42-43 1.2168031757589445E-5 7.057458419401877E-4 0.0 0.0323913005387031 1.7035244460625223E-4 44-45 2.433606351517889E-5 7.726700166069297E-4 0.0 0.040118000704772394 1.886044922426364E-4 46-47 2.433606351517889E-5 8.152581277584928E-4 0.0 0.04825232993472094 2.129405557578153E-4 48-49 2.433606351517889E-5 8.213421436372875E-4 0.0 0.0561372145136389 2.1902457163661002E-4 50-51 2.433606351517889E-5 9.673585247283609E-4 0.0 0.06453924044225441 2.1902457163661002E-4 52-53 2.433606351517889E-5 9.977786041223346E-4 0.0 0.07226594060832371 2.3119260339419945E-4 54-55 2.433606351517889E-5 0.0010038626200011293 0.0 0.07979795226627158 2.4336063515178888E-4 56-57 3.042007939397361E-5 0.0010099466358799239 0.0 0.08567511160518729 2.4336063515178888E-4 58-59 3.6504095272768334E-5 0.001034282699395103 0.0 0.09166178322992129 2.4336063515178888E-4 60-61 3.6504095272768334E-5 0.001076870810546666 0.0 0.09747810241004903 2.4336063515178888E-4 62-63 4.258811115156306E-5 0.001113374905819434 0.0 0.10283203638338839 2.4336063515178888E-4 64-65 4.867212703035778E-5 0.0012776433345468917 0.0 0.10855709532533422 2.4336063515178888E-4 66-67 4.867212703035778E-5 0.0013080634139408652 0.0 0.11444033868012873 2.4336063515178888E-4 68-69 4.867212703035778E-5 0.0013263154615772495 0.0 0.12056085865419622 2.4336063515178888E-4 70-71 4.867212703035778E-5 0.0013445675092136336 0.0 0.12573835616705054 2.4336063515178888E-4 72-73 4.867212703035778E-5 0.001356735540971223 0.0 0.12976597467881262 2.676966986669678E-4 74-75 4.867212703035778E-5 0.0014175756997591702 0.0 0.1332460317614832 2.676966986669678E-4 76-77 4.867212703035778E-5 0.0015088359379410912 0.0 0.1363975519866989 2.676966986669678E-4 78-79 4.867212703035778E-5 0.0015453400332138595 0.0 0.1384417813219739 2.676966986669678E-4 80-81 4.867212703035778E-5 0.0015453400332138595 0.0 0.13912319110039892 2.676966986669678E-4 82-83 4.867212703035778E-5 0.0015575080649714488 0.0 0.13964641646597525 2.798647304245572E-4 84-85 4.867212703035778E-5 0.0015696760967290383 0.0 0.13990194513288465 2.798647304245572E-4 86-87 4.867212703035778E-5 0.0016183482237593961 0.0 0.13999320537106658 2.798647304245572E-4 88 4.867212703035778E-5 0.001776532636608059 0.0 0.14000537340282415 2.798647304245572E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10610 0.0 49.47054 1 GTATCAA 19225 0.0 38.422676 1 TCAACGC 23190 0.0 31.078451 4 ATCAACG 23470 0.0 30.689688 3 CAACGCA 23825 0.0 30.32177 5 TATCAAC 24270 0.0 29.96103 2 AACGCAG 24585 0.0 29.176151 6 ACGCAGA 27930 0.0 25.681906 7 GTGGTAT 5305 0.0 25.579887 1 CGCAGAG 29065 0.0 24.620295 8 TGGTATC 5160 0.0 23.652292 2 GCAGAGT 33490 0.0 21.48191 9 GAGTACT 18400 0.0 19.770018 12-13 CAGAGTA 32355 0.0 18.977976 10-11 GTACATG 25230 0.0 18.622026 1 AGAGTAC 30225 0.0 18.317726 10-11 GTACTTT 20065 0.0 18.055338 14-15 TACATGG 25575 0.0 17.836884 2 ACATGGG 25945 0.0 17.219723 3 AGTACTT 20175 0.0 16.402073 12-13 >>END_MODULE