##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139536_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 14539736 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.013561525463736 33.0 31.0 34.0 30.0 34.0 2 32.18099097535196 33.0 31.0 34.0 30.0 34.0 3 32.23947958890037 34.0 31.0 34.0 30.0 34.0 4 35.89482553190787 37.0 35.0 37.0 35.0 37.0 5 35.77231477930548 37.0 35.0 37.0 35.0 37.0 6 35.78903152024218 37.0 35.0 37.0 33.0 37.0 7 35.67813858518477 37.0 35.0 37.0 33.0 37.0 8 35.66511021933273 37.0 35.0 37.0 33.0 37.0 9 37.24537440019544 39.0 37.0 39.0 33.0 39.0 10-11 37.16594964310219 39.0 37.0 39.0 33.0 39.0 12-13 37.12750093949436 39.0 37.0 39.0 33.0 39.0 14-15 38.317622307585225 40.0 38.0 41.0 33.0 41.0 16-17 38.325259413238314 40.0 38.0 41.0 33.0 41.0 18-19 38.36684796065073 40.0 38.0 41.0 33.5 41.0 20-21 38.34338619281391 40.0 38.0 41.0 34.0 41.0 22-23 38.261234070159766 40.0 38.0 41.0 33.0 41.0 24-25 38.18667352097475 40.0 38.0 41.0 33.0 41.0 26-27 38.021137179920636 40.0 37.0 41.0 33.0 41.0 28-29 37.921289888465694 40.0 37.0 41.0 33.0 41.0 30-31 37.8018448449807 40.0 37.0 41.0 33.0 41.0 32-33 37.963682311890196 40.0 37.0 41.0 33.0 41.0 34-35 37.951397778630664 40.0 37.0 41.0 33.0 41.0 36-37 37.872240708855 40.0 37.0 41.0 33.0 41.0 38-39 37.68748602412137 40.0 37.0 41.0 32.0 41.0 40-41 37.71199502002303 40.0 37.0 41.0 33.0 41.0 42-43 37.683523826524244 40.0 37.0 41.0 32.5 41.0 44-45 37.66380710210722 40.0 37.0 41.0 32.5 41.0 46-47 37.69117548986597 40.0 37.0 41.0 32.5 41.0 48-49 37.61520948763233 40.0 37.0 41.0 32.0 41.0 50-51 37.53646660688556 40.0 36.0 41.0 32.0 41.0 52-53 37.399359550347505 39.0 36.0 41.0 31.5 41.0 54-55 37.299975517072966 39.0 36.0 41.0 31.0 41.0 56-57 37.16203965848201 39.0 35.5 41.0 31.0 41.0 58-59 37.020633267437304 39.0 35.0 40.0 31.0 41.0 60-61 36.82514096871873 39.0 35.0 40.0 31.0 41.0 62-63 36.58766543747639 38.0 35.0 40.0 31.0 41.0 64-65 36.38278839148424 38.0 35.0 40.0 30.5 41.0 66-67 36.09635498794129 37.5 34.5 40.0 30.0 41.0 68-69 35.816740322223374 37.0 34.0 39.5 30.0 41.0 70-71 35.528691193808015 36.5 34.0 39.0 29.5 41.0 72-73 35.230694899009386 36.0 34.0 39.0 29.0 40.0 74-75 34.89921306347914 35.5 34.0 38.5 29.0 40.0 76-77 33.85400239781365 35.0 32.5 37.0 28.0 39.0 78-79 34.18263569539399 35.0 33.0 37.0 29.0 39.0 80-81 34.07357364397927 35.0 33.0 36.5 29.0 39.0 82-83 33.859627574554736 35.0 33.0 36.0 29.0 38.5 84-85 33.639380835073695 35.0 33.0 36.0 29.0 37.0 86-87 33.43435731963225 35.0 33.0 35.5 29.0 37.0 88-89 33.21767736053657 35.0 33.0 35.0 29.0 36.5 90-91 33.11431722684423 35.0 33.0 35.0 29.0 36.0 92-93 33.04258511145417 34.5 33.0 35.0 29.0 36.0 94-95 32.994806424365095 34.0 33.0 35.0 29.0 36.0 96-97 32.91644872753085 34.0 32.0 35.0 29.0 35.0 98-99 33.041429739922215 34.0 32.5 35.0 29.0 35.0 100-101 32.57526676311046 34.0 32.0 35.0 27.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 3.0 19 19.0 20 113.0 21 617.0 22 3147.0 23 10369.0 24 26507.0 25 55356.0 26 98340.0 27 152206.0 28 213465.0 29 280045.0 30 350499.0 31 430446.0 32 531101.0 33 664927.0 34 874269.0 35 1194084.0 36 1794139.0 37 2928734.0 38 3391404.0 39 1484982.0 40 54963.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.658847450875314 22.436906694867087 15.85755064603649 24.04669520822111 2 13.574331555804198 22.844716977667208 41.04856359629591 22.532387870232693 3 16.364197709599676 28.22578742698712 31.79019361364988 23.61982124976332 4 11.8659444710688 19.907472872960007 39.842490950317114 28.38409170565408 5 12.34586377634367 38.75194845353451 36.467264605079485 12.434923165042337 6 28.268353703258438 39.99718426799496 19.2912374750133 12.443224553733302 7 25.05216738460726 33.313149564751384 24.674547048171988 16.96013600246937 8 23.884787179079456 37.45845866802534 21.67352969820085 16.983224454694362 9 25.33127836709002 16.75413501318043 21.722210086895664 36.19237653283388 10-11 23.544777566800388 27.29321220137697 29.797549281500025 19.36446095032262 12-13 24.529895178289344 24.909953660781735 29.69561826982278 20.864532891106137 14-15 21.6826632890721 26.0819144171531 27.218984581288137 25.016437712486667 16-17 21.249275090001635 29.136209900922548 27.80897466088793 21.80554034818789 18-19 21.338870939609908 28.483213175259852 29.363432045808807 20.81448383932143 20-21 22.16094040230097 27.65865492102655 29.155431675900722 21.02497300077176 22-23 21.899686444472373 27.58817446545156 29.023982667670147 21.488156422405925 24-25 21.690946466508272 27.769949468443862 29.017139679916237 21.52196438513163 26-27 21.639639789723596 27.879380884629125 28.913690545850162 21.56728877979712 28-29 21.6472341356897 27.894810751142806 28.931416719387116 21.526538393780378 30-31 21.849567367963616 27.812570173992547 28.826822875999365 21.511039582044475 32-33 21.654496762346863 27.964786647039524 28.823926085201084 21.55679050541253 34-35 21.767869713898897 27.973735364330523 28.8492566949365 21.409138226834088 36-37 21.792147096279923 27.908883949518255 28.75432599241023 21.544642961791595 38-39 21.732186866666368 28.00392386411013 28.75292249990671 21.51096676931679 40-41 21.82852700702473 27.911768301226964 28.665193313149313 21.594511378598998 42-43 21.724012456866237 28.05708668260054 28.461271859125308 21.757629001407913 44-45 21.833969193710516 28.128463598173724 28.301205240626427 21.736361967489334 46-47 21.883541256095885 28.102721514758226 28.109356637905208 21.904380591240677 48-49 21.86540225758845 28.21593608458547 28.03340338256869 21.885258275257392 50-51 21.89910780983006 28.265766584257 27.8972356971509 21.93788990876204 52-53 21.99280219269696 28.199032149167397 27.824666094275003 21.983499563860644 54-55 21.975424909539058 28.14816292909388 27.907312944040935 21.96909921732613 56-57 21.931990451587343 28.248241423923798 27.88240177196316 21.9373663525257 58-59 21.927767961693867 28.235462021244494 27.886766885614893 21.950003131446746 60-61 22.01471955149755 28.232344349818796 27.8661600111623 21.88677608752136 62-63 22.025714054030164 28.297810395558326 27.828384885840414 21.848090664571103 64-65 21.97740861671676 28.215359855553 27.8149480417539 21.992283485976337 66-67 22.031797373852385 28.278021040272076 27.70842081663001 21.98176076924553 68-69 21.969295350724792 28.241460091577085 27.758649748392845 22.030594809305278 70-71 21.958221668731998 28.06620312977699 27.857004579715085 22.11857062177593 72-73 21.998791515335036 28.120247720654156 27.754413180760583 22.12654758325022 74-75 21.866893557690197 28.21747979554828 27.789294066691266 22.126332580070255 76-77 21.954210746166027 28.16044508702682 27.770919198218852 22.114424968588295 78-79 21.905757134905937 28.16715970580706 27.71678308144579 22.210300077841215 80-81 21.943469456387984 28.205065662007094 27.72817163952362 22.123293242081306 82-83 21.982607237882007 28.144678809809836 27.819951151004773 22.052762801303384 84-85 21.96496964995785 28.165850548649452 27.775546114326914 22.093633687065783 86-87 21.878356265595862 28.203571292632994 27.83930669495749 22.078765746813655 88-89 21.939114192559458 28.16246172206088 27.792834590696085 22.10558949468358 90-91 21.933629226088033 28.24832816903894 27.80119098973491 22.01685161513812 92-93 21.987836551271336 28.16722929741572 27.793779160444803 22.051154990868145 94-95 21.73494753212214 28.218989296064578 27.90106889097162 22.144994280841665 96-97 21.78023001671513 28.268455695184286 27.892263010708646 22.059051277391937 98-99 21.933386691231966 28.894149776393892 28.00249404789581 21.169969484478337 100-101 22.505837522998306 31.567740631420953 25.20932015001919 20.71710169556155 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3717.0 1 3326.0 2 4515.0 3 6418.5 4 8150.0 5 11915.5 6 15096.5 7 17744.0 8 19480.0 9 19132.0 10 17576.5 11 15926.5 12 17333.0 13 23108.5 14 37167.5 15 57050.5 16 72543.5 17 79673.0 18 80605.0 19 77995.5 20 73596.5 21 70729.0 22 71815.5 23 79086.0 24 94164.0 25 117504.5 26 146219.0 27 176202.0 28 209656.0 29 246493.5 30 281931.0 31 315107.0 32 349199.5 33 384386.5 34 417214.5 35 447889.5 36 479644.0 37 506437.5 38 528039.0 39 547871.5 40 562438.5 41 573566.5 42 579162.5 43 583385.5 44 587055.5 45 589475.5 46 590238.5 47 584402.5 48 576753.0 49 567471.5 50 553682.5 51 534222.0 52 508369.5 53 478200.0 54 446917.0 55 413772.5 56 378476.0 57 340897.0 58 302472.0 59 261451.5 60 217355.0 61 175944.0 62 139570.5 63 107535.0 64 79475.5 65 59408.5 66 45582.5 67 34904.5 68 26734.5 69 19736.0 70 14345.5 71 10509.5 72 7478.5 73 5175.5 74 3561.0 75 2388.5 76 1619.0 77 1082.5 78 726.5 79 490.0 80 324.0 81 226.5 82 173.0 83 127.0 84 99.5 85 84.5 86 65.5 87 45.5 88 29.5 89 16.5 90 10.0 91 7.5 92 7.0 93 6.0 94 3.5 95 1.5 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0018225915518686171 3 4.814392778520876E-5 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0022766082457581407 22-23 4.264826756202348E-4 24-25 0.0011971957959024736 26-27 0.012214194642501123 28-29 3.1680379679708604E-4 30-31 0.002571615705470716 32-33 0.00277702298093591 34-35 0.0016414002418398946 36-37 0.06244912778724461 38-39 0.026495742901925787 40-41 0.0252831750797766 42-43 0.0035929115044990943 44-45 0.0019361035116666847 46-47 0.004013367217258821 48-49 0.0033334871492614725 50-51 8.295959911572408E-4 52-53 0.001095285591092516 54-55 0.001603775959957817 56-57 0.01278917115300133 58-59 0.009814698790461722 60-61 0.005309624671596266 62-63 0.0029310441697915995 64-65 0.0014047423164107147 66-67 6.106311593971093E-4 68-69 0.0013769603727121315 70-71 4.0221965722277706E-5 72-73 5.244708119999409E-4 74-75 1.8899332459143341E-4 76-77 0.004608775191004667 78-79 0.0012552168639015373 80-81 5.694224560499351E-4 82-83 3.9156840487037086E-4 84-85 0.0029967568818256803 86-87 0.0034003929637004744 88-89 0.0412518941945457 90-91 4.3550365521393374E-4 92-93 5.256910762556408E-4 94-95 2.676446244727577E-4 96-97 0.01699465272127057 98-99 2.4075700019787215E-4 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 328.0 20-21 1320.0 22-23 2760.0 24-25 5509.0 26-27 7225.0 28-29 12018.0 30-31 26886.0 32-33 34108.0 34-35 47844.0 36-37 78876.0 38-39 90851.0 40-41 95418.0 42-43 108738.0 44-45 128739.0 46-47 129142.0 48-49 120474.0 50-51 110950.0 52-53 105401.0 54-55 111436.0 56-57 117687.0 58-59 121104.0 60-61 123229.0 62-63 116634.0 64-65 119802.0 66-67 126928.0 68-69 131510.0 70-71 134502.0 72-73 128656.0 74-75 128001.0 76-77 128575.0 78-79 142090.0 80-81 147189.0 82-83 141979.0 84-85 140594.0 86-87 147811.0 88-89 160774.0 90-91 175469.0 92-93 188458.0 94-95 238016.0 96-97 317114.0 98-99 1212823.0 100-101 8932768.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 82.30119298709904 #Duplication Level Percentage of deduplicated Percentage of total 1 88.22376268952536 72.60920919158656 2 7.870023225843953 12.9542460064627 3 2.083076536830682 5.1431905219379965 4 0.8188474082732508 2.6956847430113084 5 0.3909522807149472 1.6087919551933696 6 0.20206300792820103 0.9978015966631562 7 0.12200613553838408 0.7028875354588299 8 0.0711574388141837 0.4685073683451059 9 0.05109692282700766 0.37848039359692176 >10 0.16189322356008767 2.064372221259906 >50 0.003960792326287315 0.2186271849275495 >100 0.0011446157580269622 0.15060582869738173 >500 1.5722059694003443E-5 0.007595452859211199 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 6.877703969315536E-6 0.0 2 0.0 2.0633111907946608E-5 0.0 6.877703969315536E-6 0.0 3 0.0 2.0633111907946608E-5 0.0 6.877703969315536E-6 0.0 4 0.0 4.814392778520876E-5 0.0 2.0633111907946608E-5 6.877703969315536E-6 5 0.0 5.502163175452429E-5 0.0 2.0633111907946608E-5 6.877703969315536E-6 6 0.0 5.502163175452429E-5 0.0 2.0633111907946608E-5 1.3755407938631073E-5 7 0.0 5.502163175452429E-5 0.0 2.7510815877262146E-5 1.3755407938631073E-5 8 0.0 6.877703969315536E-5 0.0 2.7510815877262146E-5 2.0633111907946608E-5 9 0.0 1.2379867144767965E-4 0.0 3.438851984657768E-5 2.0633111907946608E-5 10-11 6.877703969315536E-6 1.2379867144767965E-4 0.0 5.1582779769866524E-5 2.0633111907946608E-5 12-13 6.877703969315536E-6 1.2379867144767965E-4 0.0 6.189933572383983E-5 2.0633111907946608E-5 14-15 6.877703969315536E-6 1.513094873249418E-4 0.0 6.189933572383983E-5 3.094966786191991E-5 16-17 6.877703969315536E-6 1.513094873249418E-4 0.0 6.189933572383983E-5 4.814392778520876E-5 18-19 6.877703969315536E-6 1.6850374724823065E-4 0.0 6.877703969315536E-5 5.502163175452429E-5 20-21 6.877703969315536E-6 1.856980071715195E-4 0.0 7.56547436624709E-5 5.846048373918206E-5 22-23 6.877703969315536E-6 2.1320882304878163E-4 0.0 8.941015160110198E-5 7.565474366247091E-5 24-25 6.877703969315536E-6 2.37280786941386E-4 0.0 1.1692096747836412E-4 8.941015160110198E-5 26-27 6.877703969315536E-6 2.475973428953593E-4 0.0 1.2035981946302188E-4 8.941015160110198E-5 28-29 6.877703969315536E-6 2.5103619488001707E-4 0.0 2.2008652701809717E-4 8.941015160110198E-5 30-31 6.877703969315536E-6 2.785470107572792E-4 0.0 7.393531767014201E-4 9.284900358575975E-5 32-33 6.877703969315536E-6 2.81985862741937E-4 0.0 0.0018707354796538259 9.628785557041751E-5 34-35 6.877703969315536E-6 3.163743825885147E-4 0.0 0.003218765457639671 1.1692096747836412E-4 36-37 6.877703969315536E-6 3.507629024350924E-4 0.0 0.0054230695798053 1.1692096747836412E-4 38-39 6.877703969315536E-6 3.576406064044079E-4 0.0 0.009281461506591315 1.2035981946302188E-4 40-41 6.877703969315536E-6 3.782737183123545E-4 0.0 0.013968616761679854 1.2379867144767965E-4 42-43 6.877703969315536E-6 3.885902742663278E-4 0.0 0.01801270669563739 1.2723752343233742E-4 44-45 1.3755407938631073E-5 4.2985649808222103E-4 0.0 0.022878682253928133 1.306763754169952E-4 46-47 1.3755407938631073E-5 4.6080616594414093E-4 0.0 0.028281118721825486 1.306763754169952E-4 48-49 1.3755407938631073E-5 4.6768386991345647E-4 0.0 0.033686994041707496 1.3755407938631072E-4 50-51 1.3755407938631073E-5 5.158277976986652E-4 0.0 0.03929576162868431 1.3755407938631072E-4 52-53 1.3755407938631073E-5 5.158277976986652E-4 0.0 0.04477041398825948 1.650648952635729E-4 54-55 1.3755407938631073E-5 5.158277976986652E-4 0.0 0.050609584658208376 2.0289226709480833E-4 56-57 1.3755407938631073E-5 5.227055016679807E-4 0.0 0.056741057746853174 2.1320882304878163E-4 58-59 1.3755407938631073E-5 5.227055016679807E-4 0.0 0.06253208448901686 2.166476750334394E-4 60-61 1.3755407938631073E-5 5.364609096066118E-4 0.0 0.06850880923835206 2.3384193495672823E-4 62-63 1.3755407938631073E-5 5.433386135759274E-4 0.0 0.07474344788653658 2.475973428953593E-4 64-65 1.3755407938631073E-5 5.983602453304516E-4 0.0 0.08124631698952443 2.475973428953593E-4 66-67 1.3755407938631073E-5 6.017990973151094E-4 0.0 0.08774230838854295 2.5103619488001707E-4 68-69 1.3755407938631073E-5 6.086768012844249E-4 0.0 0.09464408432175109 2.5447504686467484E-4 70-71 1.3755407938631073E-5 6.121156532690827E-4 0.0 0.10096125541756742 2.613527508339904E-4 72-73 1.3755407938631073E-5 6.155545052537405E-4 0.0 0.10647717400095848 2.682304548033059E-4 74-75 1.3755407938631073E-5 6.568207290696337E-4 0.0 0.11120559547986292 2.682304548033059E-4 76-77 1.3755407938631073E-5 6.808926929622382E-4 0.0 0.11539755604916072 2.7510815877262144E-4 78-79 1.3755407938631073E-5 6.877703969315537E-4 0.0 0.11951386187479608 2.7510815877262144E-4 80-81 1.3755407938631073E-5 6.877703969315537E-4 0.0 0.12205517349145817 2.785470107572792E-4 82-83 1.3755407938631073E-5 6.877703969315537E-4 0.0 0.12391559241515801 2.923024186959103E-4 84-85 1.3755407938631073E-5 6.98086952885527E-4 0.0 0.12557311907176305 2.9574127068056805E-4 86-87 1.3755407938631073E-5 7.42792028686078E-4 0.0 0.12575881707893458 2.9574127068056805E-4 88-89 1.3755407938631073E-5 8.0125251242526E-4 0.0 0.12578632789481184 2.9574127068056805E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 16935 0.0 47.561523 1 GTATCAA 30405 0.0 35.494095 1 TCAACGC 37945 0.0 27.642515 4 ATCAACG 38125 0.0 27.500824 3 CAACGCA 38810 0.0 27.004446 5 AACGCAG 39995 0.0 26.300285 6 TATCAAC 40310 0.0 26.285883 2 ACGCAGA 46005 0.0 22.86447 7 CGCAGAG 47050 0.0 22.347576 8 GTACATG 42220 0.0 20.047087 1 TACATGG 42645 0.0 19.597332 2 GCAGAGT 54490 0.0 19.092817 9 ACATGGG 43125 0.0 18.80522 3 AGAGTAC 49790 0.0 18.779911 10-11 GAGTACT 30460 0.0 17.700518 12-13 CAGAGTA 53800 0.0 17.039356 10-11 CATGGGG 30550 0.0 16.859812 4 AGTACTT 34655 0.0 16.289925 12-13 GTACTTT 34570 0.0 15.646447 14-15 GTGGTAT 9055 0.0 14.315091 1 >>END_MODULE