##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139426_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13122849 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.697182905937574 32.0 18.0 33.0 18.0 33.0 2 28.813834099592246 31.0 27.0 33.0 18.0 33.0 3 30.62104387545723 32.0 29.0 33.0 27.0 33.0 4 31.88661890417241 33.0 31.0 33.0 29.0 33.0 5 32.727241775013944 33.0 33.0 34.0 32.0 34.0 6 36.87470030326494 38.0 37.0 38.0 35.0 38.0 7 37.006032531502875 38.0 38.0 38.0 35.0 38.0 8 37.22509548040978 38.0 38.0 38.0 36.0 38.0 9 37.3120132678506 38.0 38.0 38.0 37.0 38.0 10-11 37.31107315187426 38.0 38.0 38.0 37.0 38.0 12-13 37.35172991017423 38.0 38.0 38.0 37.0 38.0 14-15 37.348145703726374 38.0 38.0 38.0 37.0 38.0 16-17 37.36305877633737 38.0 38.0 38.0 37.0 38.0 18-19 37.3630889908129 38.0 38.0 38.0 37.0 38.0 20-21 37.32450940047622 38.0 38.0 38.0 37.0 38.0 22-23 37.34185217052412 38.0 38.0 38.0 37.0 38.0 24-25 37.35616706285886 38.0 38.0 38.0 37.0 38.0 26-27 37.321421153743074 38.0 38.0 38.0 37.0 38.0 28-29 37.29742020627988 38.0 38.0 38.0 37.0 38.0 30-31 37.29855065196935 38.0 38.0 38.0 37.0 38.0 32-33 37.236671152953456 38.0 38.0 38.0 37.0 38.0 34-35 37.244473905016115 38.0 38.0 38.0 37.0 38.0 36-37 37.24174768694775 38.0 38.0 38.0 37.0 38.0 38-39 37.22889093584254 38.0 38.0 38.0 37.0 38.0 40-41 37.22748376942011 38.0 38.0 38.0 37.0 38.0 42-43 37.194503909468764 38.0 38.0 38.0 37.0 38.0 44-45 37.16992792856901 38.0 38.0 38.0 36.0 38.0 46-47 37.1441522375129 38.0 38.0 38.0 36.0 38.0 48-49 37.10213296171054 38.0 38.0 38.0 36.0 38.0 50-51 37.07711060573398 38.0 38.0 38.0 36.0 38.0 52-53 37.0475573998592 38.0 38.0 38.0 36.0 38.0 54-55 37.02164242363429 38.0 38.0 38.0 36.0 38.0 56-57 36.99003966728756 38.0 38.0 38.0 36.0 38.0 58-59 36.995487660565175 38.0 38.0 38.0 36.0 38.0 60-61 37.01969517197034 38.0 38.0 38.0 36.0 38.0 62-63 37.03055630033927 38.0 38.0 38.0 36.0 38.0 64-65 37.02977639695324 38.0 38.0 38.0 36.0 38.0 66-67 37.035279268237794 38.0 38.0 38.0 36.0 38.0 68-69 37.03759638567918 38.0 38.0 38.0 36.0 38.0 70-71 37.02722279619451 38.0 38.0 38.0 36.0 38.0 72-73 37.01093368896121 38.0 38.0 38.0 36.0 38.0 74-75 37.00671009898028 38.0 38.0 38.0 36.0 38.0 76-77 37.006160296059264 38.0 38.0 38.0 36.0 38.0 78-79 36.98159955514597 38.0 38.0 38.0 36.0 38.0 80-81 36.961525030475265 38.0 38.0 38.0 36.0 38.0 82-83 36.96508343823447 38.0 38.0 38.0 36.0 38.0 84-85 36.91472858807505 38.0 38.0 38.0 35.5 38.0 86-87 36.9060586575758 38.0 38.0 38.0 35.0 38.0 88-89 36.912932309670694 38.0 38.0 38.0 35.0 38.0 90-91 36.89661120719862 38.0 38.0 38.0 35.0 38.0 92-93 36.90669189848007 38.0 38.0 38.0 35.0 38.0 94-95 36.85802838517371 38.0 38.0 38.0 35.0 38.0 96-97 36.833284013351964 38.0 38.0 38.0 35.0 38.0 98-99 36.91237034241411 38.0 38.0 38.0 35.0 38.0 100 35.365402523644406 38.0 35.0 38.0 29.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 7.0 19 51.0 20 133.0 21 378.0 22 1116.0 23 3085.0 24 7163.0 25 13785.0 26 24475.0 27 39038.0 28 59410.0 29 84918.0 30 115013.0 31 149770.0 32 194297.0 33 259837.0 34 380872.0 35 685611.0 36 2089693.0 37 9014194.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.40540312549508 18.311366685694548 13.729701530513685 23.553528658296685 2 14.403377041494863 20.029884567656815 41.60594649248024 23.960791898368083 3 18.3854816892277 25.54137443782215 30.493713674522965 25.57943019842719 4 12.29229262639538 17.76193568942232 39.65009427449786 30.295677409684433 5 13.3562441903016 37.620097582357694 35.52318034416429 13.500477883176423 6 29.88718975544381 37.94701951933702 18.79609380078219 13.369696924436973 7 26.318250428565506 32.878815635142615 23.104070092101956 17.69886384418992 8 24.303426793983533 36.497935775988886 21.214905391352136 17.98373203867544 9 25.557521846056446 16.966894917407036 21.234306666182015 36.2412765703545 10-11 24.096722441902667 26.6022530625781 29.061661838827835 20.23936265669139 12-13 24.99354370381005 24.067898670479256 29.001640573628485 21.93691705208221 14-15 22.18034361288467 25.406270391437104 26.711592886575165 25.70179310910306 16-17 21.885994420876138 28.539016184671485 27.32238632022665 22.25260307422573 18-19 21.80794734436097 27.75134804949748 28.976466924217448 21.4642376819241 20-21 22.639977736278848 26.998785462802072 28.858876081389994 21.502360719529083 22-23 22.35879165574855 26.852046212770492 28.635418316608817 22.153743814872136 24-25 22.149268968873653 26.949022900730196 28.860215910925586 22.04149221947056 26-27 22.091680675445705 27.143811930540846 28.774047387781902 21.990460006231544 28-29 21.925283984760625 27.220213477160954 28.762809990506078 22.091692547572343 30-31 22.309057939665617 26.962513155828642 28.695435452014966 22.032993452490768 32-33 22.092501935957635 27.126125538101448 28.666067867505596 22.115304658435317 34-35 22.10369342685043 27.298678929576308 28.67740217672059 21.92022546685267 36-37 22.205031718899406 27.099565585853902 28.554279481746285 22.141123213500403 38-39 22.005942242000863 27.151073996296756 28.79177038405863 22.051213377643748 40-41 22.359745429619352 27.069882930050294 28.660582868150097 21.909788772180256 42-43 22.372966755401848 27.08217407407711 28.466636582046746 22.078222588474294 44-45 22.30492061669363 27.349893395035078 28.2338692937538 22.111316694517495 46-47 22.37022714259353 27.101827293699866 28.069941323542576 22.45800424016403 48-49 22.311525811069387 27.09184007302776 28.27053387189181 22.326100244011037 50-51 22.096818121581666 27.38363223540755 28.151004554793946 22.368545088216838 52-53 22.333962627238286 27.367089738001106 28.021267971539487 22.27767966322112 54-55 22.419622396793933 27.18423232770842 27.999355412491223 22.396789863006425 56-57 22.442185410824905 27.350676671307273 27.87882177577341 22.328316142094415 58-59 22.26921960826026 27.485217592453942 28.15072696048008 22.094835838805718 60-61 22.48389274114852 27.505963477726052 27.869237379130002 22.140906401995426 62-63 22.26804174734331 27.683887806489466 27.843953458446514 22.20411698772071 64-65 22.195145097341324 27.683690522412146 27.804320170539388 22.316844209707142 66-67 22.322812358189363 27.682540816840362 27.660168766357724 22.334478058612557 68-69 22.369975789675518 27.548998970381337 27.817148193829933 22.263877046113215 70-71 22.315176699714744 27.245810836359187 27.828980018238536 22.61003244568753 72-73 22.379627969833056 27.225925396545875 27.893611105188487 22.500835528432578 74-75 22.23326147690036 27.40372998293773 27.805399758948578 22.557608781213332 76-77 22.375319294243944 27.256824722664565 27.69498179367203 22.672874189419463 78-79 22.46946669443476 27.314918364545637 27.614722803089286 22.600892137930316 80-81 22.431814347488192 27.301786739898855 27.591523183144588 22.67487572946836 82-83 22.50127193152372 27.328070752992645 27.691633857779784 22.479023457703846 84-85 22.731257767206255 27.25115802826406 27.476153391333412 22.54143081319627 86-87 22.402702285308628 27.337760929536177 27.639750028135555 22.619786757019643 88-89 22.53289537361373 27.273899045468774 27.631292306951405 22.561913273966088 90-91 22.56495990433207 27.28559234595525 27.577576608367433 22.57187114134524 92-93 22.627388761391906 27.282796340133842 27.593925923248825 22.495888975225427 94-95 22.468618602685556 27.450129495370973 27.552141387371478 22.529110514571993 96-97 22.474403667953762 27.535768043403262 27.72557564214187 22.264252646501102 98-99 23.64704794093608 29.393976795522708 27.832463123972158 19.12651213956905 100 22.52460965275504 30.314295328039975 21.711120376813955 25.449974642391027 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2013.0 1 1873.0 2 2593.0 3 3853.5 4 5031.5 5 6913.5 6 8624.0 7 10735.0 8 13700.0 9 15713.5 10 15999.0 11 16315.5 12 18310.5 13 22040.5 14 28263.5 15 35233.5 16 40741.0 17 44466.0 18 44730.5 19 41609.0 20 37929.0 21 36107.5 22 38469.5 23 45999.0 24 57708.0 25 75026.0 26 99293.0 27 127311.0 28 152622.0 29 178278.5 30 201792.5 31 225090.5 32 254678.5 33 284334.0 34 313921.0 35 345103.5 36 382187.0 37 413927.0 38 428807.0 39 442324.0 40 467440.5 41 492980.5 42 509465.0 43 528680.5 44 547693.0 45 559131.5 46 557970.0 47 551108.0 48 550665.0 49 547037.0 50 540323.0 51 529720.0 52 506152.0 53 478718.0 54 452617.0 55 420969.5 56 385994.5 57 353246.5 58 320558.0 59 280388.0 60 231180.5 61 182149.5 62 141985.0 63 107703.0 64 80261.0 65 59204.5 66 42751.5 67 31748.0 68 23318.0 69 16732.5 70 11960.5 71 8489.5 72 5871.0 73 3886.0 74 2530.0 75 1605.5 76 982.5 77 599.5 78 364.0 79 231.0 80 154.5 81 98.5 82 58.5 83 34.0 84 22.0 85 16.5 86 11.5 87 7.0 88 5.5 89 3.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.002720445842210026 3 0.0 4 0.0 5 0.00301001710832762 6 1.2192474362846056E-4 7 7.620296476778785E-6 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 4.294454672187097E-5 44-45 7.85969377689882E-6 46-47 0.0 48-49 0.0 50-51 1.6072809828523208E-5 52-53 0.0011405299533094539 54-55 0.002332870301327452 56-57 0.002673416578823884 58-59 0.0017224933508452115 60-61 0.0043828204261075416 62-63 0.0017322005384920755 64-65 0.0017204128720361132 66-67 1.236494495467608E-4 68-69 1.290894349677978E-4 70-71 1.9983111664150966E-4 72-73 0.0 74-75 0.0 76-77 0.0 78-79 8.559269517702282E-5 80-81 3.001310208329127E-4 82-83 9.180306076912788E-6 84-85 4.632298133596127E-6 86-87 0.0 88-89 0.0 90-91 2.8617950456794954E-5 92-93 2.3130107868703679E-4 94-95 0.0 96-97 0.0 98-99 5.350031137181219E-6 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 85.0 20-21 331.0 22-23 666.0 24-25 1002.0 26-27 2642.0 28-29 6755.0 30-31 21166.0 32-33 27183.0 34-35 36872.0 36-37 60064.0 38-39 70185.0 40-41 69833.0 42-43 80035.0 44-45 94547.0 46-47 96262.0 48-49 90547.0 50-51 82254.0 52-53 80164.0 54-55 86094.0 56-57 89304.0 58-59 90589.0 60-61 92292.0 62-63 91865.0 64-65 98900.0 66-67 106114.0 68-69 108303.0 70-71 116899.0 72-73 97806.0 74-75 97508.0 76-77 101575.0 78-79 103907.0 80-81 103545.0 82-83 99342.0 84-85 98935.0 86-87 103024.0 88-89 106400.0 90-91 107226.0 92-93 108588.0 94-95 133171.0 96-97 413042.0 98-99 900384.0 100-101 8847443.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 80.24225561343818 #Duplication Level Percentage of deduplicated Percentage of total 1 87.60583028658465 70.29689427083609 2 8.033082755118581 12.891853596002548 3 2.1963363985172673 5.287169601087624 4 0.9282778704306943 2.9794844063759127 5 0.44645752415156637 1.791237938675637 6 0.2455649475398814 1.182281117411742 7 0.14176593117580205 0.7962932660680057 8 0.09935422171330786 0.6377925483994767 9 0.06789851763454505 0.4903497187024233 >10 0.2270950893838062 2.7975338039370405 >50 0.005615566854407541 0.30113910448509984 >100 0.0025007416753255493 0.36090189908987197 >500 1.2008819292455453E-4 0.06226404907394475 >1k 1.000610271633958E-4 0.12480467985455641 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 7.620296476778785E-6 0.0 0.0 0.0 3 0.0 7.620296476778785E-6 0.0 0.0 0.0 4 0.0 7.620296476778785E-6 0.0 0.0 0.0 5 0.0 7.620296476778785E-6 0.0 0.0 0.0 6 0.0 7.620296476778785E-6 0.0 0.0 0.0 7 0.0 7.620296476778785E-6 0.0 0.0 0.0 8 0.0 7.620296476778785E-6 0.0 0.0 0.0 9 0.0 1.524059295355757E-5 0.0 0.0 0.0 10-11 0.0 1.524059295355757E-5 0.0 7.620296476778785E-6 0.0 12-13 0.0 1.524059295355757E-5 0.0 1.524059295355757E-5 0.0 14-15 0.0 1.524059295355757E-5 0.0 1.524059295355757E-5 0.0 16-17 0.0 1.524059295355757E-5 0.0 1.524059295355757E-5 0.0 18-19 0.0 2.2860889430336356E-5 0.0 1.524059295355757E-5 0.0 20-21 0.0 3.048118590711514E-5 0.0 1.524059295355757E-5 0.0 22-23 0.0 4.1911630622283315E-5 0.0 1.524059295355757E-5 3.8101482383893925E-6 24-25 0.0 4.572177886067271E-5 0.0 4.1911630622283315E-5 7.620296476778785E-6 26-27 0.0 4.572177886067271E-5 0.0 8.001311300617725E-5 7.620296476778785E-6 28-29 0.0 4.572177886067271E-5 0.0 3.01001710832762E-4 7.620296476778785E-6 30-31 0.0 6.096237181423028E-5 0.0 0.0011049429891329238 7.620296476778785E-6 32-33 0.0 6.096237181423028E-5 0.0 0.002990966367135673 7.620296476778785E-6 34-35 0.0 8.001311300617725E-5 0.0 0.005520904797426229 7.620296476778785E-6 36-37 0.0 9.90638541981242E-5 0.0 0.00927390081223978 7.620296476778785E-6 38-39 0.0 1.0668415067490299E-4 0.0 0.01868877710929997 7.620296476778785E-6 40-41 0.0 1.2192474362846056E-4 0.0 0.02879710038574703 7.620296476778785E-6 42-43 0.0 1.2573489186684994E-4 0.0 0.03549153084059719 7.620296476778785E-6 44-45 0.0 1.2954504010523934E-4 0.0 0.043081346131468856 7.620296476778785E-6 46-47 0.0 1.2954504010523934E-4 0.0 0.05153987522069331 7.620296476778785E-6 48-49 0.0 1.2954504010523934E-4 0.0 0.05977360556385279 7.620296476778785E-6 50-51 0.0 1.2954504010523934E-4 0.0 0.06804162724115777 7.620296476778785E-6 52-53 0.0 1.2954504010523934E-4 0.0 0.08770580229948542 7.620296476778785E-6 54-55 0.0 1.2954504010523934E-4 0.0 0.11084102240298582 7.620296476778785E-6 56-57 0.0 1.2954504010523934E-4 0.0 0.13871606691504262 7.620296476778785E-6 58-59 0.0 1.3335518834362874E-4 0.0 0.16183985657382782 7.620296476778785E-6 60-61 0.0 1.447856330587969E-4 0.0 0.17099183264243917 7.620296476778785E-6 62-63 3.8101482383893925E-6 1.600262260123545E-4 0.0 0.18219747861154234 7.620296476778785E-6 64-65 7.620296476778785E-6 1.7526681896591205E-4 0.0 0.18784411830083542 7.620296476778785E-6 66-67 7.620296476778785E-6 1.7526681896591205E-4 0.0 0.1932469085028716 7.620296476778785E-6 68-69 7.620296476778785E-6 1.7526681896591205E-4 0.0 0.19871066107672197 7.620296476778785E-6 70-71 7.620296476778785E-6 1.7907696720430145E-4 0.0 0.20376291764082632 7.620296476778785E-6 72-73 7.620296476778785E-6 1.8288711544269085E-4 0.0 0.20751591365563987 7.620296476778785E-6 74-75 7.620296476778785E-6 1.8669726368108022E-4 0.0 0.21047258868863006 7.620296476778785E-6 76-77 7.620296476778785E-6 1.9050741191946961E-4 0.0 0.21340259268395148 7.620296476778785E-6 78-79 7.620296476778785E-6 1.9050741191946961E-4 0.0 0.21527337546900066 7.620296476778785E-6 80-81 7.620296476778785E-6 1.9050741191946961E-4 0.0 0.2159477717071956 7.620296476778785E-6 82-83 7.620296476778785E-6 1.9050741191946961E-4 0.0 0.21636307786518005 7.620296476778785E-6 84-85 7.620296476778785E-6 1.9050741191946961E-4 0.0 0.216587876611245 7.620296476778785E-6 86-87 7.620296476778785E-6 1.9050741191946961E-4 0.0 0.21667932016896635 7.620296476778785E-6 88 7.620296476778785E-6 2.057480048730272E-4 0.0 0.21668313031720474 7.620296476778785E-6 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14570 0.0 50.52663 1 GTATCAA 27460 0.0 39.350098 1 ATCAACG 31560 0.0 33.5274 3 TCAACGC 32025 0.0 33.067505 4 CAACGCA 32445 0.0 32.57303 5 TATCAAC 34095 0.0 31.439608 2 AACGCAG 34270 0.0 30.938301 6 ACGCAGA 38655 0.0 27.372828 7 CGCAGAG 39920 0.0 26.505426 8 GCAGAGT 47725 0.0 22.206823 9 GAGTACT 28495 0.0 20.08645 12-13 CAGAGTA 45295 0.0 19.563507 10-11 TACATGG 34515 0.0 19.30606 2 GTACATG 35730 0.0 19.276838 1 AGAGTAC 42320 0.0 18.876469 10-11 ACATGGG 34630 0.0 18.843378 3 TATACAC 13835 0.0 18.754381 3 CTTATAC 11015 0.0 18.430132 1 GTGGTAT 7800 0.0 17.627394 1 GTACTTT 32775 0.0 17.44409 14-15 >>END_MODULE