##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139322_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11089420 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.151503775670864 31.0 25.0 33.0 18.0 33.0 2 30.577648154727658 33.0 29.0 33.0 25.0 33.0 3 30.376648192601596 33.0 29.0 33.0 25.0 33.0 4 31.753701095278203 33.0 32.0 33.0 29.0 34.0 5 31.85647130327826 33.0 32.0 33.0 30.0 34.0 6 34.990518530274805 37.0 34.0 38.0 29.0 38.0 7 36.11654450818889 38.0 37.0 38.0 33.0 38.0 8 36.195438174404075 38.0 37.0 38.0 33.0 38.0 9 36.619329234531655 38.0 38.0 38.0 34.0 38.0 10-11 36.76623863105554 38.0 38.0 38.0 34.5 38.0 12-13 36.841888890492015 38.0 38.0 38.0 35.0 38.0 14-15 36.88523236562417 38.0 38.0 38.0 35.0 38.0 16-17 36.89141699926597 38.0 38.0 38.0 35.0 38.0 18-19 36.909588238158534 38.0 38.0 38.0 35.0 38.0 20-21 36.924155189829705 38.0 38.0 38.0 35.0 38.0 22-23 36.93884784203907 38.0 38.0 38.0 35.0 38.0 24-25 36.932416326981084 38.0 38.0 38.0 35.0 38.0 26-27 36.912436100607465 38.0 38.0 38.0 35.0 38.0 28-29 36.892890573837235 38.0 38.0 38.0 35.0 38.0 30-31 36.88386885411522 38.0 38.0 38.0 35.0 38.0 32-33 36.855082182438366 38.0 38.0 38.0 35.0 38.0 34-35 36.83176719364584 38.0 38.0 38.0 35.0 38.0 36-37 36.802531625282896 38.0 38.0 38.0 35.0 38.0 38-39 36.7754546116829 38.0 38.0 38.0 35.0 38.0 40-41 36.78008782479763 38.0 38.0 38.0 35.0 38.0 42-43 36.73172857043695 38.0 38.0 38.0 35.0 38.0 44-45 36.69547946342835 38.0 38.0 38.0 34.5 38.0 46-47 36.65291892323845 38.0 38.0 38.0 34.0 38.0 48-49 36.618388673316524 38.0 38.0 38.0 34.0 38.0 50-51 36.59020864053144 38.0 38.0 38.0 34.0 38.0 52-53 36.564495270048965 38.0 38.0 38.0 34.0 38.0 54-55 36.55009871917756 38.0 38.0 38.0 34.0 38.0 56-57 36.5330787478467 38.0 38.0 38.0 34.0 38.0 58-59 36.519069976777395 38.0 38.0 38.0 34.0 38.0 60-61 36.5184892720928 38.0 38.0 38.0 34.0 38.0 62-63 36.50349439001094 38.0 38.0 38.0 34.0 38.0 64-65 36.49201918156763 38.0 38.0 38.0 34.0 38.0 66-67 36.46370926821331 38.0 38.0 38.0 34.0 38.0 68-69 36.44984027771821 38.0 38.0 38.0 34.0 38.0 70-71 36.450676526239164 38.0 38.0 38.0 34.0 38.0 72-73 36.43077545448586 38.0 38.0 38.0 34.0 38.0 74-75 36.41931005173994 38.0 38.0 38.0 34.0 38.0 76-77 36.40815489820777 38.0 38.0 38.0 34.0 38.0 78-79 36.395025212999556 38.0 38.0 38.0 34.0 38.0 80-81 36.38834269185299 38.0 38.0 38.0 34.0 38.0 82-83 36.365292759023006 38.0 38.0 38.0 34.0 38.0 84-85 36.35421348264915 38.0 38.0 38.0 34.0 38.0 86-87 36.33756208478371 38.0 38.0 38.0 33.5 38.0 88-89 36.33817386058436 38.0 38.0 38.0 33.5 38.0 90-91 36.340892465243485 38.0 38.0 38.0 34.0 38.0 92-93 36.310268768425985 38.0 37.0 38.0 33.0 38.0 94-95 36.29957732180668 38.0 37.0 38.0 33.0 38.0 96-97 36.29498759329084 38.0 37.0 38.0 33.0 38.0 98-99 36.32131057010368 38.0 37.0 38.0 33.0 38.0 100-101 35.77745827297881 38.0 36.0 38.0 31.5 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 4.0 18 35.0 19 81.0 20 156.0 21 554.0 22 2286.0 23 6469.0 24 14658.0 25 27996.0 26 46188.0 27 70124.0 28 99839.0 29 134673.0 30 173894.0 31 220676.0 32 283860.0 33 371583.0 34 520226.0 35 824329.0 36 1820276.0 37 6471513.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.392294637591505 20.241780002921704 14.27972788477666 26.086197474710126 2 13.882222875497547 20.34044161011126 43.313581774339866 22.463753740051327 3 17.878017405215253 25.69215737286848 29.75532511122303 26.674500110693238 4 12.363072189528397 18.401963312779205 38.90898712466477 30.325977373027623 5 13.82238966261695 36.64149827230844 35.3640063025957 14.172105762478909 6 29.660947100930436 37.94776462610308 18.69773171184787 13.693556561118617 7 26.355968120965752 32.809497701412695 22.677020078597437 18.157514099024112 8 23.99565531831241 36.964331768478424 20.952556580957346 18.087456332251822 9 25.124875782502603 17.517814277031622 21.243284139296737 36.11402580116904 10-11 24.114985274252394 26.967348157072234 28.521176039865026 20.396490528810343 12-13 25.068312860366003 24.221861918837956 28.788015964766416 21.92180925602962 14-15 22.14941706578597 25.63970456153868 26.557597803166548 25.6532805695088 16-17 21.67900575503498 28.968237292843092 27.14858847441976 22.204168477702172 18-19 21.661673919826285 27.831865868548583 29.165344084722193 21.34111612690294 20-21 22.445646143275237 26.959372258173342 29.115432359306798 21.479549239244623 22-23 22.089669933739287 26.965298303071382 29.03588020224695 21.909151560942377 24-25 21.938099195531162 27.11176282859095 29.12385712126937 21.826280854608513 26-27 21.882272438071116 27.30509071059614 29.07186061255546 21.740776238777283 28-29 21.74975632852216 27.232873239176104 29.22160694375176 21.79576348854998 30-31 22.094680795638183 27.251074576022955 28.946689308994543 21.70755531934432 32-33 22.058078572902982 27.195443353122723 28.97009932225914 21.776378751715153 34-35 22.020182769823325 27.19435049552514 28.99206633264184 21.793400402009695 36-37 21.903354509048288 27.259762431231273 28.985479646101687 21.85140341361876 38-39 21.76007697807009 27.23638517967577 29.13455746194477 21.868980380309367 40-41 22.07259235579731 27.106221893714665 29.013031061499166 21.80815468898886 42-43 22.060069004548538 27.135340211697084 28.845883949614375 21.958706834140003 44-45 22.003983169538692 27.336944222620495 28.716184956706858 21.94288765113395 46-47 22.19050175256895 27.205041557845306 28.357630303074266 22.24682638651148 48-49 22.04399207063466 27.305953949730366 28.434592471553493 22.215461508081482 50-51 21.958148807404772 27.485790910169694 28.391323128040817 22.164737154384717 52-53 22.184320716847576 27.429613749156072 28.338434769185977 22.04763076481037 54-55 22.127734399197113 27.301786498891122 28.268502059670297 22.301977042241468 56-57 22.238042078053734 27.53339588927453 28.093230766358012 22.135331266313724 58-59 22.03241673400243 27.68523578363756 28.33881931685124 21.94352816550877 60-61 22.19942309985409 27.767028950514483 28.125527750523528 21.908020199107902 62-63 22.036820303728536 27.968079244663492 28.035324558531922 21.95977589307605 64-65 22.014090776833033 27.92530843780387 27.998224353219413 22.062376432143683 66-67 22.103961676744696 27.93903005440372 27.86633266645596 22.090675602395624 68-69 22.083059351796642 27.78245349334614 28.031523633344356 22.102963521512862 70-71 22.086597949930166 27.4755464442248 28.120764895853632 22.3170907099914 72-73 22.17491698572001 27.428714090345036 28.08943536903113 22.306933554903825 74-75 22.030043337902423 27.555299088796016 28.089397340464608 22.325260232836957 76-77 22.192329102975695 27.523748709729766 28.00841561507203 22.27550657222251 78-79 22.151688679289045 27.580255860626128 27.931066874542182 22.336988585542645 80-81 22.199139974926968 27.598359964057416 27.890841441763637 22.311658619251975 82-83 22.23488801890426 27.572556769876073 27.95911535897128 22.23343985224838 84-85 22.34448433385942 27.515849826728683 27.943109435458798 22.196556403953103 86-87 22.153591529560305 27.59041131335535 27.95167850787516 22.304318649209183 88-89 22.213627165024143 27.603016099943346 27.9282032052805 22.25515352975201 90-91 22.289389228345406 27.591162830761707 27.935057753918567 22.18439018697432 92-93 22.318435514371007 27.5676941436723 27.888915967250906 22.224954374705785 94-95 22.158413546747152 27.69914465785889 27.896830782683253 22.2456110127107 96-97 22.205173615750894 27.723229689385743 27.90455027536022 22.167046419503148 98-99 22.48878663155751 28.26198813388665 27.942384099389212 21.306841135166625 100-101 23.054448191377798 30.809830415535007 25.286135088436012 20.849586304651186 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2184.0 1 2128.0 2 2810.0 3 3771.0 4 4825.0 5 6927.5 6 8903.0 7 11253.0 8 14228.0 9 15914.0 10 15605.0 11 15028.5 12 16298.5 13 20029.0 14 27730.0 15 37301.0 16 44805.5 17 49327.5 18 49344.5 19 45252.5 20 40283.5 21 36213.5 22 35093.0 23 38855.0 24 47290.5 25 61112.5 26 80467.0 27 102222.5 28 125543.0 29 149726.5 30 172519.5 31 196070.0 32 221782.0 33 249803.5 34 276730.0 35 300096.5 36 328487.5 37 353988.5 38 370444.0 39 384363.0 40 403248.5 41 422438.5 42 432063.5 43 443803.5 44 466379.5 45 477958.0 46 471661.5 47 466631.5 48 459738.5 49 449844.5 50 439081.5 51 424318.5 52 403894.0 53 381222.5 54 359435.0 55 334240.0 56 306783.5 57 277418.5 58 247145.5 59 215665.0 60 180789.0 61 145963.0 62 113944.5 63 87001.0 64 65120.0 65 48063.0 66 35561.5 67 27114.5 68 20621.0 69 14873.0 70 10451.0 71 7269.5 72 4982.0 73 3323.5 74 2128.5 75 1279.5 76 786.0 77 466.5 78 293.0 79 196.5 80 144.5 81 95.5 82 59.0 83 37.5 84 28.5 85 22.5 86 16.0 87 14.0 88 11.0 89 7.0 90 5.0 91 4.0 92 2.5 93 2.5 94 2.0 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0019387848958737246 4 0.0 5 0.06314126437631545 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 3.607041666741814E-5 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 4.510126316009758E-6 28-29 4.511390267920641E-6 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 1.3699113671911797E-5 40-41 0.0 42-43 0.0 44-45 9.289973805060862E-6 46-47 2.8080336907882223E-4 48-49 0.0 50-51 8.54395852420774E-5 52-53 3.343219232604144E-5 54-55 0.001989492500165911 56-57 0.0025299734125432695 58-59 8.231708267479667E-4 60-61 0.0028938836885363016 62-63 0.004770905182951373 64-65 0.0023028166033375523 66-67 0.00755494391870379 68-69 0.0044195821876678995 70-71 0.0017964659228277028 72-73 7.980345901142461E-4 74-75 7.1067346997319E-4 76-77 0.0 78-79 5.271389863612803E-6 80-81 2.445935909992111E-4 82-83 0.0 84-85 0.0011250379632702149 86-87 0.0010965224526883295 88-89 1.4862277058275372E-4 90-91 4.779228539152107E-4 92-93 2.3568032971004756E-4 94-95 5.6669565881657175E-6 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 135.0 20-21 448.0 22-23 975.0 24-25 1254.0 26-27 2447.0 28-29 5581.0 30-31 16162.0 32-33 21160.0 34-35 29532.0 36-37 47641.0 38-39 57699.0 40-41 57050.0 42-43 65878.0 44-45 79361.0 46-47 79934.0 48-49 73607.0 50-51 65914.0 52-53 63475.0 54-55 67433.0 56-57 70975.0 58-59 70784.0 60-61 70749.0 62-63 69942.0 64-65 78023.0 66-67 84872.0 68-69 84169.0 70-71 94526.0 72-73 72981.0 74-75 73756.0 76-77 77660.0 78-79 81253.0 80-81 82075.0 82-83 78738.0 84-85 78004.0 86-87 80678.0 88-89 85483.0 90-91 87510.0 92-93 86158.0 94-95 94114.0 96-97 158697.0 98-99 945297.0 100-101 7647290.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 82.03660240192421 #Duplication Level Percentage of deduplicated Percentage of total 1 88.07833505677175 72.25647353275848 2 8.033882584259214 13.181448626172331 3 2.06448459777903 5.080899063386842 4 0.8021751113099619 2.6323088265301857 5 0.3964007289723892 1.6259684497270406 6 0.19956173768543375 0.9822820157482216 7 0.11794383226123492 0.6772997891081921 8 0.07336777934898274 0.4815074674851683 9 0.056014052924619404 0.41356823298276085 >10 0.17278234602877918 2.1671747711516454 >50 0.003971402264411334 0.22287321393835752 >100 9.191413561551613E-4 0.12302746710785985 >500 1.2122217419432944E-4 0.07634160540570673 >1k 4.040686381058491E-5 0.07882693849714142 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.017604166854534E-6 2 0.0 9.017604166854534E-6 0.0 0.0 9.017604166854534E-6 3 0.0 9.017604166854534E-6 0.0 1.803520833370907E-5 9.017604166854534E-6 4 0.0 6.312322916798174E-5 0.0 1.803520833370907E-5 9.017604166854534E-6 5 9.017604166854534E-6 7.214083333483627E-5 0.0 2.70528125005636E-5 9.017604166854534E-6 6 1.803520833370907E-5 7.214083333483627E-5 0.0 2.70528125005636E-5 9.017604166854534E-6 7 1.803520833370907E-5 7.214083333483627E-5 0.0 2.70528125005636E-5 9.017604166854534E-6 8 1.803520833370907E-5 8.11584375016908E-5 0.0 2.70528125005636E-5 2.70528125005636E-5 9 1.803520833370907E-5 1.5329927083652706E-4 0.0 4.508802083427267E-5 2.70528125005636E-5 10-11 4.508802083427267E-5 1.5329927083652706E-4 0.0 7.664963541826353E-5 2.70528125005636E-5 12-13 5.41056250011272E-5 1.5329927083652706E-4 0.0 8.11584375016908E-5 3.156161458399087E-5 14-15 5.41056250011272E-5 2.2544010417136333E-4 0.0 9.017604166854534E-5 4.959682291769993E-5 16-17 6.312322916798174E-5 2.3445770833821787E-4 0.0 9.919364583539987E-5 6.312322916798174E-5 18-19 7.664963541826353E-5 2.5249291667192694E-4 0.0 1.1722885416910893E-4 7.214083333483627E-5 20-21 1.082112500022544E-4 2.70528125005636E-4 0.0 1.1722885416910893E-4 8.566723958511807E-5 22-23 1.35264062502818E-4 3.2914255209019045E-4 0.0 1.487904687530998E-4 9.46848437519726E-5 24-25 1.35264062502818E-4 3.787393750078904E-4 0.0 1.5329927083652706E-4 1.1722885416910893E-4 26-27 1.623168750033816E-4 3.877569791747449E-4 0.0 1.9838729167079972E-4 1.1722885416910893E-4 28-29 1.6682567708680888E-4 3.877569791747449E-4 0.0 3.652129687576086E-4 1.1722885416910893E-4 30-31 1.7133447917023613E-4 4.463714062592994E-4 0.0 9.017604166854533E-4 1.217376562525362E-4 32-33 1.8035208333709067E-4 4.73424218759863E-4 0.0 0.002209313020879361 1.35264062502818E-4 34-35 1.8486088542051795E-4 5.275298437609902E-4 0.0 0.004071448281334822 1.487904687530998E-4 36-37 1.9838729167079975E-4 5.771266666786902E-4 0.0 0.006839852760559163 1.5329927083652706E-4 38-39 2.0740489583765426E-4 5.861442708455447E-4 0.0 0.011276514010651596 1.623168750033816E-4 40-41 2.1191369792108154E-4 6.492675000135264E-4 0.0 0.016416548385758678 1.7133447917023613E-4 42-43 2.2093130208793605E-4 6.582851041803809E-4 0.0 0.02111472015668989 1.893696875039452E-4 44-45 2.2544010417136333E-4 7.259171354317899E-4 0.0 0.0262592633338804 2.0740489583765426E-4 46-47 2.2544010417136333E-4 7.93549166683199E-4 0.0 0.03192682755274848 2.0740489583765426E-4 48-49 2.3445770833821787E-4 7.93549166683199E-4 0.0 0.037747691042453076 2.2544010417136333E-4 50-51 2.434753125050724E-4 8.747076041848898E-4 0.0 0.04422233083425463 2.2544010417136333E-4 52-53 2.5249291667192694E-4 8.837252083517443E-4 0.0 0.050061229532292945 2.3896651042164512E-4 54-55 2.570017187553542E-4 8.837252083517443E-4 0.0 0.05587307541783069 2.5249291667192694E-4 56-57 2.70528125005636E-4 8.927428125185988E-4 0.0 0.06100409218877092 2.5249291667192694E-4 58-59 2.70528125005636E-4 9.017604166854533E-4 0.0 0.06564364953261757 2.570017187553542E-4 60-61 2.70528125005636E-4 9.378308333528715E-4 0.0 0.07006678437645973 2.6151052083878145E-4 62-63 2.750369270890633E-4 9.693924479368623E-4 0.0 0.07461165687655441 2.7954572917249053E-4 64-65 2.7954572917249053E-4 0.0011091653125231077 0.0 0.079007738907896 2.7954572917249053E-4 66-67 2.7954572917249053E-4 0.0011226917187733894 0.0 0.08370591067882721 2.7954572917249053E-4 68-69 2.840545312559178E-4 0.0011587621354408077 0.0 0.08825980078308875 2.840545312559178E-4 70-71 2.885633333393451E-4 0.0011813061458579438 0.0 0.09255668916859494 3.2012494792333594E-4 72-73 2.885633333393451E-4 0.0011948325521082257 0.0 0.09641622375200867 3.6972177084103585E-4 74-75 2.885633333393451E-4 0.001199341354191653 0.0 0.09932440109581925 3.6972177084103585E-4 76-77 2.885633333393451E-4 0.001235411770859071 0.0 0.1020747703667099 3.6972177084103585E-4 78-79 2.885633333393451E-4 0.0012624645833596347 0.0 0.10413078411675272 3.6972177084103585E-4 80-81 2.885633333393451E-4 0.0012624645833596347 0.0 0.10522191422094213 3.787393750078904E-4 82-83 2.885633333393451E-4 0.0012804997916933437 0.0 0.10558712718969973 4.1030098959188126E-4 84-85 2.975809375061996E-4 0.0012895173958601984 0.0 0.10590725213762306 4.148097916753085E-4 86-87 2.975809375061996E-4 0.0012985350000270528 0.0 0.10602448099179218 4.148097916753085E-4 88-89 2.975809375061996E-4 0.001370675833361889 0.0 0.10607407781470987 4.2833619792559033E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14835 0.0 49.838 1 GTATCAA 28280 0.0 39.532646 1 TCAACGC 33300 0.0 33.40178 4 ATCAACG 33865 0.0 32.81928 3 CAACGCA 34370 0.0 32.33648 5 TATCAAC 34965 0.0 32.049377 2 AACGCAG 35495 0.0 31.304697 6 CTTATAC 8605 0.0 28.504705 1 ACGCAGA 40280 0.0 27.564209 7 CGCAGAG 40890 0.0 27.142317 8 GTGGTAT 7285 0.0 24.847078 1 TGGTATC 7105 0.0 24.307346 2 GCAGAGT 47655 0.0 23.353436 9 TATACAC 13100 0.0 22.228363 3 GAGTACT 28630 0.0 21.153011 12-13 CAGAGTA 46565 0.0 19.888597 10-11 AGAGTAC 43245 0.0 19.445196 10-11 TATGCCG 7310 0.0 19.2229 42-43 GTACTTT 31395 0.0 19.13772 14-15 TACATGG 32240 0.0 19.108232 2 >>END_MODULE