##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139282_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9712527 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.61278192585719 33.0 33.0 33.0 33.0 33.0 2 32.636544948600914 33.0 33.0 33.0 33.0 33.0 3 32.61766757508113 33.0 33.0 33.0 33.0 33.0 4 36.5334667280719 37.0 37.0 37.0 37.0 37.0 5 36.55606826112298 37.0 37.0 37.0 37.0 37.0 6 36.5034621782776 37.0 37.0 37.0 37.0 37.0 7 36.47706122206919 37.0 37.0 37.0 37.0 37.0 8 36.48273822044459 37.0 37.0 37.0 37.0 37.0 9 36.504565083834514 37.0 37.0 37.0 37.0 37.0 10-11 36.44178286454184 37.0 37.0 37.0 37.0 37.0 12-13 36.39810983279635 37.0 37.0 37.0 37.0 37.0 14-15 35.25830146984405 40.0 35.0 40.0 19.5 40.0 16-17 35.53596854865886 40.0 33.0 40.0 24.0 40.0 18-19 37.83776009065406 40.0 37.0 40.0 35.0 40.0 20-21 38.152339275130814 40.0 37.0 40.0 37.0 40.0 22-23 38.18528394854143 40.0 37.0 40.0 37.0 40.0 24-25 38.22092703579976 40.0 37.0 40.0 37.0 40.0 26-27 38.1515492259203 40.0 37.0 40.0 37.0 40.0 28-29 38.072294306235136 40.0 37.0 40.0 35.0 40.0 30-31 37.92644776869516 40.0 37.0 40.0 33.0 40.0 32-33 37.71266287866044 40.0 37.0 40.0 33.0 40.0 34-35 37.61783976409539 40.0 37.0 40.0 33.0 40.0 36-37 37.5490637632941 40.0 37.0 40.0 33.0 40.0 38-39 37.54664726440766 40.0 37.0 40.0 33.0 40.0 40-41 37.498858460271 40.0 37.0 40.0 33.0 40.0 42-43 37.440625475088744 40.0 37.0 40.0 33.0 40.0 44-45 37.390549751346626 40.0 37.0 40.0 33.0 40.0 46-47 37.24037728504118 40.0 37.0 40.0 33.0 40.0 48-49 36.992762748886506 37.0 37.0 40.0 33.0 40.0 50-51 36.893330860194254 37.0 37.0 40.0 33.0 40.0 52-53 36.82125213743153 37.0 37.0 40.0 33.0 40.0 54-55 36.590981954368345 37.0 37.0 40.0 33.0 40.0 56-57 36.48283725280353 37.0 37.0 40.0 33.0 40.0 58-59 36.443142682795965 37.0 37.0 40.0 33.0 40.0 60-61 36.32944099915274 37.0 37.0 40.0 33.0 40.0 62-63 36.156294633201234 37.0 37.0 40.0 33.0 40.0 64-65 35.88351673226941 37.0 35.0 40.0 33.0 40.0 66-67 35.541139277796304 37.0 33.0 40.0 27.0 40.0 68-69 35.24812511224228 37.0 33.0 37.0 27.0 40.0 70-71 35.0031920590518 37.0 33.0 37.0 27.0 40.0 72-73 34.779695058750804 37.0 33.0 37.0 27.0 40.0 74-75 34.48884261087567 37.0 33.0 37.0 27.0 40.0 76-77 31.667532844277673 33.0 30.0 35.0 24.5 37.0 78-79 33.82318257182018 37.0 33.0 37.0 27.0 37.0 80-81 34.16300811814416 37.0 33.0 37.0 27.0 37.0 82-83 34.129548409027194 37.0 33.0 37.0 27.0 37.0 84-85 34.073480167282085 37.0 33.0 37.0 27.0 37.0 86-87 33.872168091188406 37.0 33.0 37.0 27.0 37.0 88-89 33.62562102115558 35.0 33.0 37.0 27.0 37.0 90-91 33.45204648378136 33.0 33.0 37.0 27.0 37.0 92-93 33.46344255890328 33.0 33.0 37.0 27.0 37.0 94-95 33.39249658025501 33.0 33.0 37.0 27.0 37.0 96-97 33.35008676364832 33.0 33.0 37.0 27.0 37.0 98-99 33.3534137589215 33.0 33.0 37.0 27.0 37.0 100 33.36418083033485 33.0 33.0 37.0 27.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 0.0 15 1.0 16 0.0 17 3.0 18 5.0 19 17.0 20 107.0 21 453.0 22 1835.0 23 5226.0 24 12154.0 25 24656.0 26 43655.0 27 70896.0 28 105980.0 29 150077.0 30 204286.0 31 274085.0 32 365016.0 33 494788.0 34 695614.0 35 1064866.0 36 1795034.0 37 2803670.0 38 1568154.0 39 31948.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.66636036064419 20.57274798921679 14.838874280579816 22.922017369559196 2 14.627925765848952 21.33624890179694 41.83236023593206 22.203465096422047 3 18.106762124246206 26.731386147798837 30.787952321043548 24.37389940691141 4 12.331042401458904 18.73362933688724 39.022203973108454 29.913124288545394 5 13.171164641102411 37.92058085852075 35.39286405587839 13.51539044449844 6 28.92836230982936 38.368263995559545 18.96353029443316 13.739843400177934 7 25.79658208414762 33.50963142753683 22.805733255619266 17.88805323269629 8 24.360673591949862 36.44033113112582 21.207807195799816 17.99118808112451 9 25.43381346584674 17.131205915823966 21.36550045111844 36.06948016721086 10-11 23.85017308059993 27.314595882204497 28.607853548309315 20.227377488886262 12-13 25.051863433687238 24.83953455161566 28.926210449659497 21.182391565037605 14-15 22.35381480102745 25.834852869212632 27.02379573541986 24.78753659434006 16-17 21.26880573922729 29.420968405029917 27.510796108983786 21.799429746759007 18-19 21.205089056637885 28.01935582778817 29.903458698235795 20.872096417338145 20-21 22.22823478983279 27.069471171654598 29.882611467417664 20.81968257109495 22-23 21.87289491709317 27.1717350159288 29.708093625592063 21.24727644138597 24-25 21.616142022369957 27.34771332732992 29.847332298060024 21.188812352240095 26-27 21.557943898643483 27.53433041314013 29.7858160748348 21.121909613381593 28-29 21.318894144355202 27.52693500265891 29.852909921000215 21.30126093198567 30-31 21.689704755650695 27.495253603512136 29.69026703140915 21.124774609428012 32-33 21.635148056658497 27.496848104491423 29.63627563216876 21.231728206681318 34-35 21.600956697440076 27.569659311753174 29.62643527065534 21.20294872015141 36-37 21.57703753231883 27.603888900781904 29.515040590507386 21.30403297639188 38-39 21.425853351730186 27.562094868891045 29.6378493589814 21.37420242039737 40-41 21.709519999915898 27.484738165047535 29.443588242158302 21.362153592878265 42-43 21.74255559388784 27.528298798838353 29.236181838051646 21.49296376922217 44-45 21.76590025830135 27.83249772353423 28.887135885347533 21.514466132816885 46-47 21.961592474137102 27.705136356283223 28.374430382059863 21.95884078751981 48-49 21.87621387141926 27.917776937226307 28.297943984363577 21.90806520699086 50-51 21.77395950218067 28.096365686463304 28.22152394336383 21.908150867992198 52-53 21.918810283949274 28.028942732651746 28.170710780693113 21.881536202705863 54-55 21.965747280386125 27.96368995977765 28.089283301983503 21.981279457852725 56-57 22.07023667034363 28.120972040347397 27.876770180063897 21.932021109245078 58-59 21.896367499401645 28.194465716438927 28.095118382850497 21.814048401308927 60-61 22.041720958703902 28.248839393110202 27.87614667085179 21.833292977334104 62-63 21.921135619202918 28.422797217997086 27.761808998909082 21.894258163890914 64-65 21.964349428015765 28.338390651921525 27.78911062367357 21.908149296389144 66-67 22.02718992798496 28.218411436825207 27.689638588774322 22.064760046415504 68-69 22.032852881994323 28.186863919858634 27.835535279086347 21.944747919060696 70-71 22.038455619759755 27.938907576586665 27.838765521795427 22.183871281858156 72-73 22.04900510061028 28.028434068094832 27.803645536824913 22.118915294469975 74-75 21.89940043360973 28.16827495072603 27.781586174282314 22.15073844138193 76-77 22.063468325985944 28.092900553064272 27.679378141986493 22.16425297896329 78-79 22.078083886519213 28.106113151090597 27.658647832971305 22.157155129418886 80-81 22.03001281088649 28.06722498174666 27.678710680729456 22.2240515266374 82-83 22.081826554384918 28.007248444075067 27.811962570954517 22.0989624305855 84-85 22.225496178918043 27.95144430003856 27.763147815740357 22.059911705303044 86-87 21.97844074754567 27.9696948423 27.85460149088685 22.197262919267484 88-89 22.061341400744524 27.94888666814493 27.787656897593294 22.20211503351725 90-91 22.14726329834024 27.89529370863082 27.850828181271996 22.106614811756938 92-93 22.102195533164423 27.832705513581217 27.880664249150744 22.184434704103612 94-95 21.99294337857972 27.8982761922699 27.899754177847385 22.209026251302994 96-97 21.980211511678064 28.06787930488316 28.011705998143583 21.9402031852952 98-99 23.051399889737922 29.989928549740615 28.180640093516622 18.77803146700484 100 22.05346107715659 30.9860014277865 22.062352115120834 24.898185379936074 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2203.0 1 2036.5 2 2920.0 3 4236.5 4 6012.5 5 10263.5 6 13775.0 7 16032.0 8 17849.0 9 17980.0 10 16830.0 11 15671.5 12 17281.0 13 23684.5 14 38672.0 15 58708.5 16 76035.5 17 87649.5 18 88673.0 19 80335.0 20 69366.0 21 58800.0 22 52107.0 23 52165.5 24 58223.0 25 70041.5 26 87694.0 27 108022.0 28 128346.5 29 150522.0 30 171532.5 31 190930.5 32 213637.0 33 236286.5 34 258043.5 35 278380.5 36 299731.5 37 318052.5 38 328483.0 39 336683.5 40 346969.5 41 356749.5 42 362909.0 43 369721.0 44 375071.5 45 380614.5 46 386194.0 47 387948.0 48 385064.5 49 377856.0 50 370733.5 51 361552.5 52 345579.5 53 325924.0 54 305663.5 55 283375.0 56 259046.5 57 232860.5 58 205683.5 59 178994.0 60 151264.5 61 123021.0 62 97169.0 63 74841.5 64 56222.0 65 42037.5 66 31631.5 67 24155.5 68 18226.5 69 12959.5 70 9235.5 71 6693.5 72 4738.0 73 3332.5 74 2354.5 75 1653.5 76 1197.5 77 851.5 78 597.5 79 421.0 80 306.0 81 223.5 82 161.0 83 104.0 84 66.0 85 44.5 86 33.0 87 28.0 88 25.0 89 23.5 90 19.0 91 14.5 92 11.0 93 5.5 94 2.5 95 2.0 96 2.0 97 2.0 98 1.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content warn #Base N-Count 1 1.8532767013157338E-4 2 7.207187171783409E-4 3 0.001544397251096445 4 3.1917543189326523E-4 5 7.20718717178341E-5 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 6.971898250578866 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.008462022515057302 26-27 0.023884253660358495 28-29 0.008962789211751566 30-31 1.0328346394560185E-4 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.025291454615224418 50-51 0.06804604907763984 52-53 0.05839403536270202 54-55 0.038427643877309924 56-57 0.005092980398726755 58-59 0.00840920202136264 60-61 0.03170242775918681 62-63 0.03295972862087144 64-65 0.0 66-67 0.0026743323073940618 68-69 0.031234265303979217 70-71 0.08329799929082288 72-73 0.07536499407015124 74-75 0.03710117673857998 76-77 0.00772147477965652 78-79 6.667945101079256E-4 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0012656694035546258 92-93 0.0024862859650241213 94-95 8.080510058370289E-4 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 272.0 20-21 913.0 22-23 2162.0 24-25 4647.0 26-27 6598.0 28-29 10885.0 30-31 21356.0 32-33 25411.0 34-35 31964.0 36-37 37441.0 38-39 45502.0 40-41 56908.0 42-43 65092.0 44-45 79086.0 46-47 80015.0 48-49 66944.0 50-51 64869.0 52-53 72206.0 54-55 68304.0 56-57 75320.0 58-59 80501.0 60-61 73876.0 62-63 67479.0 64-65 86783.0 66-67 89765.0 68-69 66302.0 70-71 77504.0 72-73 81477.0 74-75 84096.0 76-77 69989.0 78-79 83724.0 80-81 92171.0 82-83 86939.0 84-85 95785.0 86-87 105669.0 88-89 117389.0 90-91 124351.0 92-93 135058.0 94-95 162756.0 96-97 371488.0 98-99 613762.0 100-101 6129768.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 86.10599423166727 #Duplication Level Percentage of deduplicated Percentage of total 1 90.21971790521876 77.68458509529414 2 6.889714134981275 11.86491371129068 3 1.669862417289388 4.313554910123939 4 0.5799962516204702 1.997646155856834 5 0.26933799187799645 1.1595807787507804 6 0.13112126526071952 0.6774196146113057 7 0.07418688528681504 0.44715548616003 8 0.04559579506772923 0.3140857013672141 9 0.029096938479755446 0.22548787352073002 >10 0.08966762399251388 1.1426258373913696 >50 0.0012242017120336075 0.06896663674544327 >100 4.240744777093735E-4 0.06068349803084592 >500 3.63432505168472E-5 0.023360757682443452 >1k 1.817148425616393E-5 0.01993394317422615 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 2.0591963347952597E-5 0.0 0.0 0.0 3 0.0 2.0591963347952597E-5 0.0 1.0295981673976299E-5 0.0 4 0.0 4.1183926695905195E-5 0.0 1.0295981673976299E-5 0.0 5 0.0 4.1183926695905195E-5 0.0 1.0295981673976299E-5 0.0 6 5.14799083698815E-5 4.1183926695905195E-5 0.0 1.0295981673976299E-5 1.0295981673976299E-5 7 5.14799083698815E-5 5.14799083698815E-5 0.0 1.0295981673976299E-5 1.0295981673976299E-5 8 5.14799083698815E-5 6.17758900438578E-5 0.0 2.0591963347952597E-5 1.0295981673976299E-5 9 5.14799083698815E-5 1.5443972510964448E-4 0.0 7.207187171783409E-5 1.0295981673976299E-5 10-11 5.14799083698815E-5 1.5443972510964448E-4 0.0 7.207187171783409E-5 1.0295981673976299E-5 12-13 6.17758900438578E-5 1.5443972510964448E-4 0.0 7.721986255482224E-5 1.0295981673976299E-5 14-15 7.207187171783409E-5 1.9047566096856152E-4 0.0 8.236785339181039E-5 2.0591963347952597E-5 16-17 8.236785339181039E-5 2.05919633479526E-4 0.0 8.236785339181039E-5 3.08879450219289E-5 18-19 8.236785339181039E-5 2.2136360599049043E-4 0.0 9.266383506578669E-5 4.1183926695905195E-5 20-21 8.236785339181039E-5 2.3680757850145487E-4 0.0 1.02959816739763E-4 4.1183926695905195E-5 22-23 8.236785339181039E-5 2.7284351436037194E-4 0.0 1.3899575259868004E-4 4.1183926695905195E-5 24-25 9.266383506578669E-5 3.037314593823008E-4 0.0 3.191754318932653E-4 4.1183926695905195E-5 26-27 9.266383506578669E-5 3.191754318932653E-4 0.0 8.28826524755092E-4 4.1183926695905195E-5 28-29 9.266383506578669E-5 3.191754318932653E-4 0.0 0.0027747670611366123 4.1183926695905195E-5 30-31 9.781182590277484E-5 3.5006337691519416E-4 0.0 0.007557250548698604 4.6331917532893346E-5 32-33 1.0810780757675113E-4 3.552113677521823E-4 0.0 0.016900853917832095 5.14799083698815E-5 34-35 1.235517800877156E-4 4.169872577960401E-4 0.0 0.02976568301946548 6.17758900438578E-5 36-37 1.235517800877156E-4 4.993551111878505E-4 0.0 0.04515302763122306 6.17758900438578E-5 38-39 1.235517800877156E-4 5.250950653727912E-4 0.0 0.06489557249107261 7.207187171783409E-5 40-41 1.235517800877156E-4 5.559830103947202E-4 0.0 0.08051972468133164 7.207187171783409E-5 42-43 1.235517800877156E-4 5.81722964579661E-4 0.0 0.09429060017027494 7.721986255482224E-5 44-45 1.235517800877156E-4 6.795347904824357E-4 0.0 0.10515286083631994 8.236785339181039E-5 46-47 1.235517800877156E-4 7.516066622002698E-4 0.0 0.11326094640457628 8.236785339181039E-5 48-49 1.2869977092470374E-4 7.516066622002698E-4 0.0 0.11852219303997816 9.266383506578669E-5 50-51 1.5443972510964448E-4 8.64862460614009E-4 0.0 0.12349000419767173 9.266383506578669E-5 52-53 1.6473570678362078E-4 8.751584422879854E-4 0.0 0.13351314235728765 9.266383506578669E-5 54-55 1.6988369762060892E-4 8.803064331249736E-4 0.0 0.14368557225117623 9.266383506578669E-5 56-57 1.7503168845759708E-4 8.854544239619617E-4 0.0 0.15011026481573747 9.781182590277484E-5 58-59 1.7503168845759708E-4 8.854544239619617E-4 0.0 0.15788887897042653 1.02959816739763E-4 60-61 1.8532767013157338E-4 9.008983964729261E-4 0.0 0.1639120282497027 1.02959816739763E-4 62-63 2.3680757850145487E-4 9.163423689838906E-4 0.0 0.16700082275189557 1.02959816739763E-4 64-65 2.3680757850145487E-4 0.001003858213212689 0.0 0.16974470186801024 1.0810780757675113E-4 66-67 2.4195556933844303E-4 0.0010090062040496773 0.0 0.17334314746306495 1.1840378925072743E-4 68-69 2.471035601754312E-4 0.0010450421399085942 0.0 0.17722473255415405 1.235517800877156E-4 70-71 2.5739954184940747E-4 0.0010604861124195587 0.0 0.17943322062322195 1.3384776176169187E-4 72-73 2.8828748687133635E-4 0.0010656341032565467 0.0 0.18152330490303914 1.4414374343566818E-4 74-75 2.8828748687133635E-4 0.0011171140116264283 0.0 0.18365457310955224 1.4414374343566818E-4 76-77 2.8828748687133635E-4 0.00116859391999631 0.0 0.18586306117862017 1.4414374343566818E-4 78-79 2.8828748687133635E-4 0.0011840378925072744 0.0 0.18706769103447538 1.4414374343566818E-4 80-81 2.8828748687133635E-4 0.0011840378925072744 0.0 0.18755675016398926 1.5443972510964448E-4 82-83 2.985834685453127E-4 0.0011891858833442625 0.0 0.18836498472539637 1.6473570678362078E-4 84-85 2.985834685453127E-4 0.0012149258375292033 0.0 0.1888900797907692 1.6473570678362078E-4 86-87 2.985834685453127E-4 0.001245813782551132 0.0 0.18915262732345559 1.6473570678362078E-4 88 2.985834685453127E-4 0.00130758967259499 0.0 0.18916807129596655 1.7503168845759708E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 16625 0.0 54.683666 1 GTATCAA 31080 0.0 38.630623 1 CTTATAC 7955 0.0 30.503532 1 ATCAACG 39610 0.0 29.992308 3 TCAACGC 39655 0.0 29.93672 4 TATCAAC 40130 0.0 29.782133 2 CAACGCA 40580 0.0 29.20242 5 AACGCAG 41215 0.0 28.793386 6 GTGGTAT 7345 0.0 27.071857 1 TGGTATC 7010 0.0 26.56256 2 CGCAGAG 45935 0.0 25.808964 8 ACGCAGA 46925 0.0 25.244814 7 GAGTACT 28745 0.0 22.904757 12-13 GCAGAGT 49960 0.0 22.66033 9 TATACAC 12580 0.0 22.436743 3 GCGAATC 2750 0.0 22.41191 32-33 CAGAGTA 47190 0.0 21.369267 10-11 AGAGTAC 44185 0.0 20.688332 10-11 GTACATG 35535 0.0 20.604464 1 GGCGAAT 3065 0.0 20.527494 32-33 >>END_MODULE