##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139184_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 14697226 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.515698200463135 31.0 31.0 34.0 30.0 34.0 2 31.507001661401954 31.0 31.0 34.0 28.0 34.0 3 31.75060184826715 33.0 31.0 34.0 30.0 34.0 4 35.28076876547996 37.0 35.0 37.0 33.0 37.0 5 35.36691522604334 37.0 35.0 37.0 33.0 37.0 6 35.307040185678574 37.0 35.0 37.0 32.0 37.0 7 35.30065435477416 37.0 35.0 37.0 32.0 37.0 8 35.29858226307468 37.0 35.0 37.0 32.0 37.0 9 36.983880427503806 39.0 37.0 39.0 33.0 39.0 10-11 37.001827147517496 39.0 37.0 39.0 33.0 39.0 12-13 36.95291638707876 39.0 37.0 39.0 33.0 39.0 14-15 38.30536214793186 40.0 38.0 41.0 33.0 41.0 16-17 38.29445355878721 40.0 38.0 41.0 33.0 41.0 18-19 38.28105664293385 40.0 38.0 41.0 33.0 41.0 20-21 38.346974752168876 40.0 38.0 41.0 33.0 41.0 22-23 38.308216501865 40.0 38.0 41.0 33.0 41.0 24-25 38.33849731273922 40.0 38.0 41.0 33.0 41.0 26-27 38.33508753431759 40.0 38.0 41.0 33.0 41.0 28-29 38.267427745513885 40.0 38.0 41.0 33.0 41.0 30-31 38.19639721656662 40.0 38.0 41.0 33.0 41.0 32-33 38.16990913548655 40.0 38.0 41.0 33.0 41.0 34-35 38.08870220375969 40.0 38.0 41.0 32.5 41.0 36-37 37.98927898150032 40.0 38.0 41.0 32.0 41.0 38-39 37.89274895319266 40.0 37.0 41.0 32.0 41.0 40-41 37.82815932411867 40.0 37.0 41.0 32.0 41.0 42-43 37.63449383883661 40.0 37.0 41.0 31.5 41.0 44-45 37.377683380130755 39.5 36.0 41.0 31.0 41.0 46-47 37.212109185760795 39.0 36.0 40.5 31.0 41.0 48-49 37.05835393744452 39.0 36.0 40.0 30.5 41.0 50-51 36.90046217186651 39.0 35.0 40.0 30.0 41.0 52-53 36.73876380320121 39.0 35.0 40.0 30.0 41.0 54-55 36.542910226753946 38.0 35.0 40.0 30.0 41.0 56-57 36.504008930402705 38.0 35.0 40.0 30.0 41.0 58-59 36.54577642636309 38.0 35.0 40.0 30.0 41.0 60-61 36.85289856812859 39.0 35.0 40.0 31.0 41.0 62-63 36.80586041267371 38.5 35.0 40.0 31.0 41.0 64-65 36.57312992164208 38.0 35.0 40.0 31.0 41.0 66-67 36.3320007774056 37.5 35.0 40.0 31.0 41.0 68-69 36.03994916312813 37.0 34.5 40.0 30.0 41.0 70-71 35.78641699000993 36.5 34.0 39.0 30.0 41.0 72-73 35.4882506089404 36.0 34.0 39.0 30.0 41.0 74-75 35.18703076085751 35.5 34.0 38.5 30.0 40.0 76-77 34.8978015612424 35.0 34.0 37.5 30.0 39.5 78-79 34.61448851016942 35.0 34.0 37.0 30.0 39.0 80-81 34.341442942661324 35.0 34.0 36.5 30.0 39.0 82-83 34.11733430582367 35.0 34.0 36.0 29.5 38.0 84-85 33.91218671218821 35.0 34.0 36.0 29.0 37.0 86-87 33.74393712456734 35.0 33.0 35.5 29.0 37.0 88-89 33.615109221421505 35.0 33.0 35.0 29.0 36.5 90-91 33.507477022527844 35.0 33.0 35.0 29.0 36.0 92-93 33.44012085806068 35.0 33.0 35.0 29.0 36.0 94-95 33.426576988389094 35.0 33.0 35.0 29.0 36.0 96-97 33.44764264770011 35.0 33.0 35.0 30.0 35.5 98-99 33.49525752435835 35.0 33.0 35.0 30.0 35.0 100 32.75862916608953 34.0 32.0 35.0 28.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 1.0 15 4.0 16 96.0 17 528.0 18 2255.0 19 7206.0 20 18904.0 21 37554.0 22 60117.0 23 83914.0 24 108802.0 25 134288.0 26 155852.0 27 167813.0 28 191217.0 29 228840.0 30 269114.0 31 321677.0 32 404302.0 33 530009.0 34 726512.0 35 1050839.0 36 1697882.0 37 2903336.0 38 3531717.0 39 1981056.0 40 83390.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.80046629207443 19.983798303162786 13.349872962421616 24.86586244234116 2 14.66757043699305 21.089255099903546 41.11782307940526 23.12535138369814 3 17.91947399432666 26.28442003415547 30.049518217861376 25.746587753656495 4 12.384205313099823 17.84334681803009 38.91740648755804 30.85504138131204 5 13.47070417999998 37.78561350756544 35.6441356848144 13.099546627620182 6 30.052861503758404 37.73541456719895 19.14232769858824 13.069396230454409 7 26.590508040759325 32.163261878593204 23.84074575859192 17.405484322055553 8 24.59502487318459 36.504711997426405 21.36074200963574 17.539521119753264 9 25.735144479432936 16.627138764335797 21.172660422081382 36.46505633414988 10-11 24.288978509027302 26.69872715702819 29.07391484136368 19.938379492580825 12-13 24.84186249609396 24.389998287040036 28.723361729004292 22.044777487861715 14-15 22.27257764612451 25.559304117412363 25.948905750159625 26.219212486303505 16-17 22.393028580371023 28.49551443647238 26.544564762556007 22.566892220600593 18-19 22.533634415154484 28.20083426644612 27.360325144416738 21.905206173982663 20-21 23.458866835028942 27.386597569849574 27.017819031236908 22.136716563884573 22-23 23.251882600023503 27.292684048531136 26.840383111872683 22.61505023957267 24-25 22.94789934430365 27.438946944217957 26.979342681992197 22.6338110294862 26-27 22.815799747194923 27.46039240937587 26.964472971119115 22.759334872310088 28-29 22.925721615605184 27.428405154426233 26.955092215766907 22.690781014201676 30-31 23.187554847796026 27.175688460237758 26.882289031296956 22.75446766066926 32-33 22.926579735690563 27.337690550706927 26.901739874109058 22.833989839493444 34-35 23.10175817552394 27.366620528422747 26.895955302018255 22.635665994035055 36-37 23.13616113621348 27.165130774585638 26.82998424526046 22.868723843940423 38-39 22.85585202705071 27.422026849325643 26.990210984471325 22.73191013915232 40-41 23.003089045553335 27.138126470190972 27.05051054327558 22.808273940980108 42-43 22.776202535133013 27.324299613564673 26.904538411911695 22.99495943939062 44-45 22.750830096479138 27.261685423334963 26.99787706029092 22.989607419894977 46-47 22.824969299697035 27.227304601543047 26.98052812886649 22.967197969893434 48-49 22.898192619575934 27.36056597661477 26.89676863780475 22.844472766004547 50-51 22.812698373252534 27.36421447937905 26.95263965933796 22.87044748803045 52-53 23.036591372301704 27.23101492659567 26.866113834705054 22.86627986639757 54-55 23.030775275568264 27.174330259179825 26.893546598069086 22.901347867182825 56-57 23.00688467447663 27.36086227160099 26.780009857235253 22.852243196687127 58-59 22.892293312592958 27.277897550422008 26.943864532591043 22.885944604393988 60-61 22.941440504220694 27.267474277804116 26.85182679127988 22.939258426695307 62-63 22.93252031316468 27.338573828194757 26.975787586869533 22.75311827177103 64-65 23.053790208220953 27.188003827040774 26.907710217571886 22.850495747166388 66-67 23.05564136280053 27.26717930084651 26.74649304803509 22.930686288317865 68-69 22.96931317944505 27.250859046218977 26.8313794821615 22.948448292174476 70-71 23.000258074031866 27.07666589974665 26.88216433300692 23.040911693214568 72-73 22.95223379730976 27.170130338675563 26.7635895841023 23.11404627991238 74-75 22.821432319304304 27.203788055788756 26.875300301489496 23.099479323417444 76-77 22.928282240139325 27.268418391606048 26.7965270835286 23.006772284726026 78-79 22.763910070827336 27.27763079675532 26.871292105631344 23.087167026786 80-81 22.836207703000447 27.259551912096114 26.902941096907107 23.001299287996332 82-83 22.982966428324765 27.16814247743664 27.03294990623057 22.81594118800802 84-85 22.888999492387743 27.206874064867172 26.9758036405853 22.928322802159787 86-87 22.740173354184115 27.39154192164927 26.97362343084957 22.894661293317046 88-89 22.92590653643615 27.18967878716661 26.854029406802997 23.03038526959424 90-91 22.918963390375875 27.283729687429414 26.889673833051837 22.907633089142877 92-93 22.937704314790917 27.330149587955297 26.97280918723423 22.759336910019552 94-95 22.63901732334609 27.470645251215135 27.04288156944696 22.847455855991818 96-97 22.734238426807483 27.5352692088499 27.093580275759077 22.636912088583543 98-99 23.89814726711705 29.540962659888265 27.183430907043398 19.37745916595129 100 22.803266438281838 30.508320930384386 20.90688348227165 25.781529149062127 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 4863.0 1 3728.0 2 2823.5 3 2982.0 4 2900.0 5 3036.0 6 3499.5 7 4085.0 8 4532.5 9 5047.0 10 5675.5 11 6243.0 12 6859.0 13 7703.5 14 8861.0 15 10340.5 16 12342.5 17 14840.5 18 18001.0 19 22163.5 20 27655.5 21 35085.0 22 45306.0 23 59118.5 24 76545.5 25 98759.5 26 124806.0 27 151374.0 28 178694.0 29 208813.0 30 236963.0 31 262850.5 32 291469.5 33 321153.5 34 349996.0 35 378785.0 36 411267.0 37 440564.5 38 464620.0 39 488498.0 40 510721.5 41 529540.0 42 542660.5 43 556127.5 44 572360.5 45 596165.5 46 618538.0 47 640646.5 48 653602.5 49 650982.5 50 648609.0 51 644559.0 52 619368.5 53 579918.5 54 551980.5 55 526877.0 56 498156.5 57 460039.0 58 418281.0 59 372491.5 60 316224.0 61 267911.5 62 223526.0 63 181829.0 64 149891.0 65 118109.0 66 91546.0 67 68564.0 68 48676.5 69 37565.5 70 29539.5 71 21973.5 72 16830.0 73 12729.5 74 9527.0 75 7071.0 76 5171.0 77 3947.0 78 3101.0 79 2449.0 80 1945.0 81 1526.0 82 1202.0 83 813.0 84 527.0 85 397.0 86 310.0 87 232.5 88 140.5 89 74.5 90 43.5 91 29.5 92 24.0 93 19.5 94 13.5 95 10.0 96 9.5 97 10.0 98 5.5 99 10.5 100 50.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0119206168565415 3 0.022044976378535648 4 0.018989978108794135 5 0.010750327987063681 6 0.01383254227702561 7 0.015533543540801508 8 0.001864297385098385 9 8.845206571634674E-5 10-11 5.7834042968380565E-5 12-13 0.0030175762419384447 14-15 2.3133617187352226E-4 16-17 5.171043841878732E-4 18-19 2.0412015165310787E-5 20-21 7.82910866687095E-5 22-23 1.0219949320633979E-5 24-25 2.386792391069523E-5 26-27 0.0025292838849800474 28-29 0.0035888379756205792 30-31 0.0026916968446635105 32-33 0.004031457455658604 34-35 0.005937368924741454 36-37 0.0011666707575151685 38-39 0.0015225530699460531 40-41 6.174544695739838E-4 42-43 6.004658484695468E-5 44-45 8.898968057866074E-5 46-47 0.00439082208324295 48-49 7.497253451824225E-4 50-51 2.777446230285522E-4 52-53 0.004323862219706461 54-55 2.2311814901778557E-4 56-57 1.801776236057912E-4 58-59 5.912791779218174E-4 60-61 4.976665563633407E-5 62-63 0.0 64-65 0.0 66-67 0.0018384110826047807 68-69 0.0 70-71 3.7115402234339146E-4 72-73 0.0015504902037988804 74-75 1.2787547074157666E-4 76-77 2.0856148221475273E-5 78-79 8.441120462512625E-6 80-81 0.0030469496913991235 82-83 9.519071004438093E-5 84-85 3.284230007676778E-4 86-87 0.013456979154625123 88-89 6.061777323887856E-4 90-91 8.424791273519228E-4 92-93 4.62283128538055E-5 94-95 2.161343442218527E-4 96-97 7.205439126600863E-5 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 5765.0 20-21 11018.0 22-23 12781.0 24-25 14873.0 26-27 18498.0 28-29 24346.0 30-31 38589.0 32-33 47326.0 34-35 61069.0 36-37 87015.0 38-39 99960.0 40-41 95829.0 42-43 104260.0 44-45 118700.0 46-47 121732.0 48-49 123848.0 50-51 118323.0 52-53 116679.0 54-55 124353.0 56-57 128200.0 58-59 130460.0 60-61 130369.0 62-63 123832.0 64-65 130941.0 66-67 137939.0 68-69 141000.0 70-71 141844.0 72-73 133700.0 74-75 133004.0 76-77 137931.0 78-79 146297.0 80-81 145704.0 82-83 139078.0 84-85 136578.0 86-87 142477.0 88-89 152959.0 90-91 162554.0 92-93 169291.0 94-95 200604.0 96-97 502276.0 98-99 917488.0 100-101 9067736.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.66238952492188 #Duplication Level Percentage of deduplicated Percentage of total 1 90.06724521008974 76.25308197413273 2 6.8825391545208765 11.653844216411459 3 1.6096983852291011 4.088427351237117 4 0.6292030300756469 2.130793280901022 5 0.29963010531529066 1.2683700344798254 6 0.1548144652594883 0.7864177537134772 7 0.08845213910941763 0.5241998618915864 8 0.06531778459742311 0.4423967777993582 9 0.04457750671520986 0.33966344138156257 >10 0.1523827374089691 2.0474623120586704 >50 0.004706185120558231 0.26216546939466406 >100 0.0014030890611511696 0.18046748722951123 >500 3.020749719154573E-5 0.02271003936904511 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.804005055103595E-6 2 0.0 2.0412015165310787E-5 0.0 0.0 6.804005055103595E-6 3 0.0 2.0412015165310787E-5 0.0 6.804005055103595E-6 6.804005055103595E-6 4 0.0 6.123604549593236E-5 0.0 6.804005055103595E-6 6.804005055103595E-6 5 0.0 7.484405560613956E-5 0.0 6.804005055103595E-6 6.804005055103595E-6 6 6.804005055103595E-6 7.484405560613956E-5 0.0 6.804005055103595E-6 6.804005055103595E-6 7 6.804005055103595E-6 7.484405560613956E-5 0.0 1.360801011020719E-5 1.360801011020719E-5 8 6.804005055103595E-6 7.484405560613956E-5 0.0 1.360801011020719E-5 2.721602022041438E-5 9 6.804005055103595E-6 1.360801011020719E-4 0.0 1.360801011020719E-5 3.4020025275517976E-5 10-11 6.804005055103595E-6 1.360801011020719E-4 0.0 1.360801011020719E-5 3.4020025275517976E-5 12-13 6.804005055103595E-6 1.4288410615717552E-4 0.0 1.360801011020719E-5 3.4020025275517976E-5 14-15 1.360801011020719E-5 1.9391414407045248E-4 0.0 2.0412015165310787E-5 5.7834042968380565E-5 16-17 2.0412015165310787E-5 2.0752215418065966E-4 0.0 3.061802274796618E-5 7.824605813369135E-5 18-19 2.0412015165310787E-5 2.2793416934597046E-4 0.0 3.4020025275517976E-5 9.865807329900212E-5 20-21 2.0412015165310787E-5 2.4494418198372944E-4 0.0 5.7834042968380565E-5 1.0886408088165753E-4 22-23 2.0412015165310787E-5 2.993762224245582E-4 0.0 1.496881112122791E-4 1.2247209099186472E-4 24-25 2.0412015165310787E-5 3.742202780306977E-4 0.0 3.9803429572356035E-4 1.530901137398309E-4 26-27 2.3814017692862582E-5 4.1504430836131933E-4 0.0 9.389526976042962E-4 1.632961213224863E-4 28-29 2.721602022041438E-5 4.218483134164229E-4 0.0 0.005235681889902217 1.632961213224863E-4 30-31 2.721602022041438E-5 5.273103917705286E-4 0.0 0.018404833674055227 1.666981238500381E-4 32-33 2.721602022041438E-5 5.37516399353184E-4 0.0 0.04774370347166193 1.7690413143269348E-4 34-35 2.721602022041438E-5 6.701944979277042E-4 0.0 0.0752216778866978 1.7690413143269348E-4 36-37 2.721602022041438E-5 7.858625838644653E-4 0.0 0.11079641831730695 1.7690413143269348E-4 38-39 2.721602022041438E-5 8.300886167226387E-4 0.0 0.14516684985316275 1.871101390153489E-4 40-41 2.721602022041438E-5 8.879226596910192E-4 0.0 0.17289657245523748 2.0071814912555607E-4 42-43 2.721602022041438E-5 9.287466900216408E-4 0.0 0.20057866702192645 2.2113016429086687E-4 44-45 2.721602022041438E-5 0.0010376107709032982 0.0 0.22182417280648742 2.4154217945617765E-4 46-47 2.721602022041438E-5 0.0011158568290369898 0.0 0.23899407956304136 2.653561971490402E-4 48-49 2.721602022041438E-5 0.0011158568290369898 0.0 0.25088748039936243 2.7896420725924745E-4 50-51 6.804005055103597E-5 0.0012383289200288544 0.0 0.2608315337873963 2.7896420725924745E-4 52-53 7.484405560613956E-5 0.0012383289200288544 0.0 0.2691188119445125 3.0277822495211E-4 54-55 7.484405560613956E-5 0.0012655449402492688 0.0 0.27514375842080674 3.231902401174208E-4 56-57 7.484405560613956E-5 0.0013233789832176493 0.0 0.2806924245432437 3.4020025275517977E-4 58-59 7.484405560613956E-5 0.0013471930009105121 0.0 0.2854110020489581 3.5380826286538695E-4 60-61 7.484405560613956E-5 0.001377811023658478 0.0 0.28992886140554686 3.606122679204906E-4 62-63 7.484405560613956E-5 0.001411831048933996 0.0 0.2940282744512468 3.742202780306978E-4 64-65 7.484405560613956E-5 0.0015513131525636199 0.0 0.29749151302429455 3.742202780306978E-4 66-67 7.484405560613956E-5 0.0015581171576187236 0.0 0.300675787390083 3.776222805582496E-4 68-69 7.484405560613956E-5 0.0015955391854217934 0.0 0.30372398165476944 3.8102428308580137E-4 70-71 7.824605813369135E-5 0.001615951200587104 0.0 0.3063095035757088 3.9463229319600855E-4 72-73 9.525607077145034E-5 0.0016363632157524147 0.0 0.3086024532792787 4.218483134164229E-4 74-75 9.525607077145034E-5 0.001666981238500381 0.0 0.3105483987250383 4.218483134164229E-4 76-77 9.865807329900214E-5 0.0017452272966340721 0.0 0.3121711539306805 4.252503159439747E-4 78-79 1.0206007582655393E-4 0.0017826493244371422 0.0 0.31343329686840227 4.286523184715265E-4 80-81 1.0206007582655393E-4 0.0017826493244371422 0.0 0.3141545214042432 4.388583260541819E-4 82-83 1.0546207835410573E-4 0.0017826493244371422 0.0 0.3145219376772188 4.5246633616438913E-4 84-85 1.0886408088165753E-4 0.0017962573345473493 0.0 0.3146750277909587 4.592703412194927E-4 86-87 1.1226608340920933E-4 0.0018234733547677637 0.0 0.31470224381117906 4.626723437470445E-4 88 1.1566808593676113E-4 0.001884709400263696 0.0 0.31471244981876173 4.694763488021481E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9935 0.0 37.504128 1 GTATCAA 17030 0.0 31.795202 1 TCAACGC 17815 0.0 28.52983 4 ATCAACG 18495 0.0 27.527058 3 CAACGCA 18535 0.0 27.351263 5 AACGCAG 19290 0.0 26.27834 6 TATCAAC 20750 0.0 25.103075 2 GTACATG 44875 0.0 22.896828 1 TACATGG 45425 0.0 22.06474 2 ACGCAGA 23155 0.0 21.836615 7 ACATGGG 45575 0.0 21.503025 3 CATGGGG 34570 0.0 19.283117 4 CGCAGAG 27765 0.0 18.209269 8 TATATAC 17430 0.0 17.159084 3 ATACAAC 12770 0.0 16.378016 6 TATACAA 15550 0.0 16.260311 5 GCAGAGT 32265 0.0 15.643381 9 AGAGTAC 26665 0.0 15.393344 10-11 ATGGGGG 18645 0.0 14.935297 5 CATATAT 17200 0.0 14.311742 1 >>END_MODULE