##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139149_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7191556 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.69164948447874 33.0 33.0 33.0 33.0 33.0 2 32.76366644436892 33.0 33.0 33.0 33.0 33.0 3 33.47802533971786 33.0 33.0 33.0 33.0 37.0 4 36.602753145494525 37.0 37.0 37.0 37.0 37.0 5 36.61404903194802 37.0 37.0 37.0 37.0 37.0 6 36.58965194736716 37.0 37.0 37.0 37.0 37.0 7 36.57854934314632 37.0 37.0 37.0 37.0 37.0 8 36.55409622062319 37.0 37.0 37.0 37.0 37.0 9 36.590326627505924 37.0 37.0 37.0 37.0 37.0 10-11 36.58271923350107 37.0 37.0 37.0 37.0 37.0 12-13 36.81888961165011 37.0 37.0 37.0 37.0 38.5 14-15 38.642914064772626 40.0 37.0 40.0 37.0 40.0 16-17 38.584465587141366 40.0 37.0 40.0 37.0 40.0 18-19 38.62547173379447 40.0 37.0 40.0 37.0 40.0 20-21 38.635995160702315 40.0 37.0 40.0 37.0 40.0 22-23 38.63282120451284 40.0 37.0 40.0 37.0 40.0 24-25 38.61927349154911 40.0 37.0 40.0 37.0 40.0 26-27 38.53944038241015 40.0 37.0 40.0 37.0 40.0 28-29 38.429763221277234 40.0 37.0 40.0 37.0 40.0 30-31 38.28132544719621 40.0 37.0 40.0 37.0 40.0 32-33 38.16564469118944 40.0 37.0 40.0 37.0 40.0 34-35 38.12921421300847 40.0 37.0 40.0 37.0 40.0 36-37 38.10724466622091 40.0 37.0 40.0 37.0 40.0 38-39 38.06922785367226 40.0 37.0 40.0 37.0 40.0 40-41 38.04631495201694 40.0 37.0 40.0 37.0 40.0 42-43 37.998013850620126 40.0 37.0 40.0 33.0 40.0 44-45 37.89427823832043 40.0 37.0 40.0 33.0 40.0 46-47 37.814697803074694 40.0 37.0 40.0 33.0 40.0 48-49 37.74758301782032 40.0 37.0 40.0 33.0 40.0 50-51 37.711561090550695 40.0 37.0 40.0 33.0 40.0 52-53 37.652623135532394 40.0 37.0 40.0 33.0 40.0 54-55 37.53788897140903 40.0 37.0 40.0 33.0 40.0 56-57 37.36385609754606 40.0 37.0 40.0 33.0 40.0 58-59 37.14070594793607 37.0 37.0 40.0 33.0 40.0 60-61 36.99926260912496 37.0 37.0 40.0 33.0 40.0 62-63 36.87482529001407 37.0 37.0 40.0 33.0 40.0 64-65 36.69345015119248 37.0 37.0 40.0 33.0 40.0 66-67 36.48614263720838 37.0 37.0 40.0 33.0 40.0 68-69 36.28145530424942 37.0 37.0 40.0 33.0 40.0 70-71 36.057179294627204 37.0 37.0 38.5 33.0 40.0 72-73 35.745440169235366 37.0 35.0 37.0 33.0 40.0 74-75 35.13933985822409 37.0 33.0 37.0 30.0 40.0 76-77 33.44878725608541 35.0 33.0 37.0 27.0 37.0 78-79 35.01984176555866 37.0 33.0 37.0 33.0 37.0 80-81 35.2217151445121 37.0 33.0 37.0 33.0 37.0 82-83 35.071704956589116 37.0 33.0 37.0 33.0 37.0 84-85 34.912915141628645 37.0 33.0 37.0 33.0 37.0 86-87 34.79451891460218 37.0 33.0 37.0 33.0 37.0 88-89 34.69687769253247 37.0 33.0 37.0 33.0 37.0 90-91 34.62286465534135 37.0 33.0 37.0 33.0 37.0 92-93 34.55593758754873 37.0 33.0 37.0 33.0 37.0 94-95 34.564084988759454 37.0 33.0 37.0 33.0 37.0 96-97 34.60064808343278 37.0 33.0 37.0 33.0 37.0 98-99 34.599537656196915 37.0 33.0 37.0 33.0 37.0 100 34.5049509359326 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 0.0 16 0.0 17 0.0 18 1.0 19 14.0 20 68.0 21 215.0 22 830.0 23 2300.0 24 5603.0 25 11349.0 26 20374.0 27 33567.0 28 50158.0 29 71168.0 30 96713.0 31 130442.0 32 174556.0 33 236309.0 34 328233.0 35 488007.0 36 880086.0 37 2146405.0 38 2424707.0 39 90450.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.609610058919166 0.02088562851836628 25.223512378697883 29.145991933864586 2 14.667812272649403 23.508190739780765 39.68405358743946 22.139943400130377 3 16.635192249798546 24.917768132205065 33.03780614901784 25.40923346897854 4 12.5584800505593 23.086606443251842 38.20374035935205 26.151173146836808 5 16.98663223739511 36.67130405037575 32.35316979429344 13.988893917935691 6 27.43146649090496 37.69328052138932 20.393656170327557 14.481596817378161 7 25.529120540812027 33.56258367452051 22.60293877986906 18.305357004798406 8 23.670134808099945 32.5014364068082 22.539183453483503 21.28924533160835 9 23.69080049630462 21.105780936546235 23.85992952007154 31.343489047077604 10-11 24.610577236948654 26.406785668572084 28.54149048958358 20.44114660489568 12-13 24.926186638780383 24.459784372649008 28.619281307058298 21.99474768151231 14-15 22.167215367860628 26.606112080770593 27.46761884261592 23.759053708752855 16-17 20.726349068268394 28.961242879844086 28.378594284741716 21.9338137671458 18-19 20.679676275899123 27.802147407320476 30.676664410316768 20.841511906463637 20-21 21.892749063540208 27.139426912681095 30.536595371150955 20.431228652627738 22-23 21.433198015154126 26.857180644658392 30.48683044985153 21.22279089033595 24-25 21.009276881726972 27.106521915272513 30.804025395363748 21.08017580763676 26-27 21.100602675372134 27.34709425865085 30.440206281683597 21.112096784293424 28-29 20.87687800769502 27.581757499358005 30.50425944483778 21.037105048109193 30-31 21.336892543882133 27.331503651378142 30.362530758276023 20.969073046463695 32-33 21.10640651101486 27.637519342722268 30.21147203850754 21.044602107755328 34-35 21.119515806459287 27.587041509732146 30.227036249321838 21.066406434486733 36-37 21.304006461693657 27.468723215891817 30.166938843173423 21.060331479241103 38-39 21.060970044821584 27.838268487881173 30.067557507670138 21.0332039596271 40-41 21.52294547255184 27.673962272148366 29.776124233215366 21.02696802208443 42-43 21.440029441949168 27.642040351881477 29.668914350477017 21.249015855692342 44-45 21.501744456809732 28.24310379627238 29.005231477287985 21.249920269629907 46-47 21.629796429161832 27.973161093452752 28.565313614552274 21.831728862833145 48-49 21.66314660719009 28.021543984568403 28.64469052031039 21.67061888793112 50-51 21.473096524008632 28.303864964524863 28.31857649462462 21.904462016841887 52-53 21.724054530046068 28.14115707346689 28.23342832475332 21.901360071733723 54-55 21.89107757038783 28.01929253140632 28.173065839890388 21.916564058315462 56-57 21.846207801436986 28.35208141378934 27.977114677339713 21.824596107433962 58-59 21.769307855636864 28.33016391070487 28.18336987158197 21.7171583620763 60-61 21.832352959342487 28.239211722863335 28.032801150413896 21.895634167380283 62-63 21.857984588435478 28.19122021122822 27.983221328881225 21.96757387145508 64-65 21.75902147192049 28.255260793530784 27.934918050977863 22.050799683570858 66-67 21.84162534477993 28.34794886531547 27.746045222782143 22.064380567122452 68-69 22.015988290723044 28.211162919757538 27.912037626761926 21.86081116275749 70-71 21.962953787711193 27.623469920712733 28.040907817590856 22.372668473985215 72-73 22.00260152523642 27.883366080103105 28.021647952398876 22.0923844422616 74-75 21.796680943548978 28.00804539963592 28.052411574464315 22.142862082350785 76-77 21.983981099721934 27.949852123011194 27.687706934052965 22.378459843213907 78-79 21.90836178560068 28.005327112713392 27.83101685929382 22.25529424239211 80-81 21.88823005215047 27.945322623728643 27.870001975539292 22.296445348581596 82-83 22.191707241227775 27.629262275699247 28.01630002399302 22.162730459079963 84-85 22.510337706423037 27.558122854515606 27.891382378829437 22.04015706023192 86-87 21.932306478595205 27.85019848859459 27.826593005294654 22.390902027515555 88-89 22.27868242212645 27.652130987305412 27.867901767136168 22.20128482343197 90-91 22.33228228087683 27.668440190837952 27.905928911873083 22.09334861641214 92-93 22.14419969144504 27.761056468287904 27.913941403699138 22.180802436567923 94-95 22.233974664383137 27.57662612589442 27.837640901646864 22.351758308075574 96-97 22.100990412419254 27.920840335505336 28.19611219766286 21.78205705441255 98-99 23.252920877957266 29.967173638810436 27.552948626936256 19.22695685629604 100 22.63522668910428 30.351070339733155 21.808213040770163 25.205489930392407 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1189.0 1 1222.0 2 2470.5 3 3909.0 4 5860.5 5 10946.0 6 14938.5 7 16916.5 8 17707.5 9 16352.0 10 14027.0 11 11958.0 12 12847.0 13 17288.0 14 28936.5 15 47780.0 16 65327.5 17 75743.5 18 76680.0 19 70567.0 20 61725.0 21 52527.0 22 46037.0 23 44740.0 24 49224.0 25 59532.0 26 75825.5 27 93653.0 28 104261.5 29 114953.0 30 126700.0 31 136310.0 32 151566.0 33 169095.0 34 188251.0 35 205463.5 36 226174.0 37 245356.0 38 248829.0 39 252652.5 40 264907.5 41 274023.0 42 277832.5 43 283873.0 44 290406.0 45 295957.5 46 302813.0 47 308219.0 48 307916.0 49 302609.0 50 293331.0 51 279093.0 52 262024.0 53 244648.0 54 226834.5 55 206295.0 56 182392.0 57 158004.5 58 136672.0 59 117592.5 60 96035.5 61 73348.5 62 54170.5 63 38609.5 64 27230.5 65 19548.5 66 14174.0 67 10669.0 68 7868.5 69 5678.0 70 4345.0 71 3194.0 72 2369.5 73 1680.0 74 1169.0 75 807.0 76 550.5 77 349.0 78 212.0 79 124.0 80 81.0 81 49.5 82 33.5 83 26.0 84 21.5 85 16.5 86 12.5 87 13.5 88 10.0 89 4.0 90 1.0 91 0.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 1.1124157275560393E-4 2 2.7810393188900984E-4 3 1.3905196594450492E-5 4 1.3905196594450492E-5 5 1.3905196594450492E-5 6 1.3905196594450492E-5 7 0.0 8 0.0 9 6.952598297225246E-5 10-11 6.465916416419479E-4 12-13 0.006201717681124919 14-15 3.893455046446138E-4 16-17 0.0 18-19 0.0 20-21 0.0 22-23 2.0860611480150782E-5 24-25 5.563969900870225E-5 26-27 0.0 28-29 0.0 30-31 4.882125270033836E-5 32-33 2.167834744978368E-4 34-35 0.005319075404349726 36-37 0.042779830117465785 38-39 0.14318764060093817 40-41 0.1661971055785144 42-43 0.04885615764157439 44-45 0.005271392241675569 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 1.5381986248196653E-5 58-59 1.3182754227864373E-4 60-61 0.001454180075809691 62-63 0.017436634937561552 64-65 0.09182165047072305 66-67 0.2025488445660395 68-69 0.1999358378592582 70-71 0.07302260953963709 72-73 0.004275980357235871 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 125.0 20-21 580.0 22-23 1284.0 24-25 2359.0 26-27 4595.0 28-29 9382.0 30-31 17814.0 32-33 22811.0 34-35 31867.0 36-37 42643.0 38-39 50172.0 40-41 54590.0 42-43 66776.0 44-45 76948.0 46-47 74958.0 48-49 62892.0 50-51 54123.0 52-53 50297.0 54-55 52430.0 56-57 53953.0 58-59 52051.0 60-61 52981.0 62-63 51320.0 64-65 54680.0 66-67 60645.0 68-69 57717.0 70-71 60598.0 72-73 56408.0 74-75 54094.0 76-77 51882.0 78-79 57406.0 80-81 58173.0 82-83 57589.0 84-85 64815.0 86-87 70852.0 88-89 77421.0 90-91 80505.0 92-93 82804.0 94-95 102266.0 96-97 335009.0 98-99 1261221.0 100-101 3660520.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 77.79889646244965 #Duplication Level Percentage of deduplicated Percentage of total 1 86.24151570087582 67.09494750777165 2 8.501695328273296 13.22845029199252 3 2.6217149981444487 6.118996010840741 4 1.1241695834399146 3.498366121131083 5 0.5571114251670742 2.167132704231049 6 0.29902010589848477 1.395806055539217 7 0.18767108494518056 1.022042231465199 8 0.1148221828318122 0.7146431290979698 9 0.08302189024170101 0.581311029872786 >10 0.2612422566404049 3.098542506970333 >50 0.005246401018964587 0.2812413601379192 >100 0.002198227518194214 0.33196243602281267 >500 2.663803368506008E-4 0.14187124150128 >1k 3.044346678266073E-4 0.32468737342548376 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.3905196594450492E-5 0.0 8 0.0 0.0 0.0 1.3905196594450492E-5 0.0 9 0.0 0.0 0.0 1.3905196594450492E-5 0.0 10-11 0.0 0.0 0.0 1.3905196594450492E-5 0.0 12-13 0.0 1.3905196594450492E-5 0.0 1.3905196594450492E-5 1.3905196594450492E-5 14-15 0.0 4.171558978335147E-5 0.0 1.3905196594450492E-5 1.3905196594450492E-5 16-17 0.0 5.5620786377801966E-5 0.0 1.3905196594450492E-5 1.3905196594450492E-5 18-19 0.0 5.5620786377801966E-5 0.0 1.3905196594450492E-5 1.3905196594450492E-5 20-21 0.0 5.5620786377801966E-5 0.0 2.7810393188900983E-5 1.3905196594450492E-5 22-23 0.0 5.5620786377801966E-5 0.0 5.5620786377801966E-5 1.3905196594450492E-5 24-25 0.0 8.343117956670295E-5 0.0 5.5620786377801966E-5 1.3905196594450492E-5 26-27 0.0 9.733637616115345E-5 0.0 1.1819417105282918E-4 1.3905196594450492E-5 28-29 0.0 9.733637616115345E-5 0.0 3.4067731656403703E-4 1.3905196594450492E-5 30-31 0.0 9.733637616115345E-5 0.0 9.525059667198587E-4 1.3905196594450492E-5 32-33 0.0 9.733637616115345E-5 0.0 0.002148352873842601 1.3905196594450492E-5 34-35 0.0 1.1124157275560393E-4 0.0 0.00367097190093493 1.3905196594450492E-5 36-37 0.0 1.3209936764727967E-4 0.0 0.005589889030969098 1.3905196594450492E-5 38-39 0.0 1.7381495743063114E-4 0.0 0.00890627841874554 1.3905196594450492E-5 40-41 0.0 1.946727523223069E-4 0.0 0.01202104245590245 1.3905196594450492E-5 42-43 0.0 2.2248314551120786E-4 0.0 0.015566867587487326 1.3905196594450492E-5 44-45 0.0 2.2248314551120786E-4 0.0 0.01959242200158074 1.3905196594450492E-5 46-47 0.0 2.2248314551120786E-4 0.0 0.023701407595240864 1.3905196594450492E-5 48-49 0.0 2.2248314551120786E-4 0.0 0.02816497570205947 1.3905196594450492E-5 50-51 0.0 2.2248314551120786E-4 0.0 0.03310827309138662 1.3905196594450492E-5 52-53 0.0 2.2248314551120786E-4 0.0 0.03807938087390267 1.3905196594450492E-5 54-55 0.0 2.2248314551120786E-4 0.0 0.0424942807926407 1.3905196594450492E-5 56-57 0.0 2.2248314551120786E-4 0.0 0.046721460557353656 1.3905196594450492E-5 58-59 0.0 2.2248314551120786E-4 0.0 0.05125455464714451 1.3905196594450492E-5 60-61 0.0 2.2248314551120786E-4 0.0 0.05562773897609919 1.3905196594450492E-5 62-63 0.0 2.2248314551120786E-4 0.0 0.06029293243353733 1.3905196594450492E-5 64-65 0.0 2.2248314551120786E-4 0.0 0.06509717785691997 1.3905196594450492E-5 66-67 0.0 2.5029353870010884E-4 0.0 0.07032553177643336 1.3905196594450492E-5 68-69 0.0 2.5029353870010884E-4 0.0 0.07499767783216872 1.3905196594450492E-5 70-71 0.0 2.711513335917846E-4 0.0 0.07919009460539556 1.3905196594450492E-5 72-73 0.0 2.9200912848346034E-4 0.0 0.08247172100168587 1.3905196594450492E-5 74-75 0.0 2.989617267806856E-4 0.0 0.08518323433760372 1.3905196594450492E-5 76-77 0.0 3.0591432507791084E-4 0.0 0.08789474767352157 1.3905196594450492E-5 78-79 0.0 3.0591432507791084E-4 0.0 0.0892296465465888 1.3905196594450492E-5 80-81 0.0 3.0591432507791084E-4 0.0 0.08975804401717792 1.3905196594450492E-5 82-83 0.0 3.0591432507791084E-4 0.0 0.0901960577099031 1.3905196594450492E-5 84-85 0.0 3.0591432507791084E-4 0.0 0.09036292006903651 1.3905196594450492E-5 86-87 0.0 3.0591432507791084E-4 0.0 0.09047416164179212 1.3905196594450492E-5 88 0.0 3.0591432507791084E-4 0.0 0.0904950194366838 1.3905196594450492E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 13985 0.0 47.620827 1 GTATCAA 25260 0.0 37.7285 1 ATCAACG 30185 0.0 31.167742 3 TATCAAC 32025 0.0 29.613909 2 ACGCAGA 32175 0.0 29.375332 7 TCAACGC 32110 0.0 29.325485 4 CAACGCA 32435 0.0 29.04504 5 AACGCAG 32560 0.0 28.987131 6 CGCAGAG 37190 0.0 25.380297 8 GCAGAGT 41180 0.0 22.839258 9 GTGGTAT 6875 0.0 22.132826 1 TGGTATC 6735 0.0 21.967054 2 ACATGGG 24165 0.0 20.460373 3 TACATGG 24930 0.0 20.458107 2 GAGTACT 28055 0.0 20.344994 12-13 CGCTACG 205 0.004181855 20.24354 94 GTACATG 27165 0.0 19.62832 1 CAGAGTA 41095 0.0 19.455063 10-11 AGAGTAC 39540 0.0 18.796822 10-11 GTACTTT 30400 0.0 18.739906 14-15 >>END_MODULE