##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139134_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 9993177 Sequences flagged as poor quality 0 Sequence length 19-100 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.68396286786474 33.0 33.0 33.0 33.0 33.0 2 32.61657709054888 33.0 33.0 33.0 33.0 33.0 3 32.68611533649409 33.0 33.0 33.0 33.0 33.0 4 36.65888555761596 37.0 37.0 37.0 37.0 37.0 5 36.667619616864584 37.0 37.0 37.0 37.0 37.0 6 36.659637470646224 37.0 37.0 37.0 37.0 37.0 7 36.6426683926443 37.0 37.0 37.0 37.0 37.0 8 36.63761324351605 37.0 37.0 37.0 37.0 37.0 9 36.63698761665084 37.0 37.0 37.0 37.0 37.0 10-11 36.64106609939962 37.0 37.0 37.0 37.0 37.0 12-13 36.63898097672042 37.0 37.0 37.0 37.0 37.0 14-15 38.7819249073643 40.0 37.0 40.0 37.0 40.0 16-17 38.716649920240584 40.0 37.0 40.0 37.0 40.0 18-19 38.78137223027271 40.0 37.0 40.0 37.0 40.0 20-21 38.806498720237514 40.0 37.0 40.0 37.0 40.0 22-23 38.81275516996959 40.0 37.0 40.0 37.0 40.0 24-25 38.80120578479149 40.0 37.0 40.0 37.0 40.0 26-27 38.708977564830676 40.0 37.0 40.0 37.0 40.0 28-29 38.598001616007565 40.0 37.0 40.0 37.0 40.0 30-31 38.419572706561276 40.0 37.0 40.0 37.0 40.0 32-33 38.301409201482514 40.0 37.0 40.0 37.0 40.0 34-35 38.264619907707356 40.0 37.0 40.0 37.0 40.0 36-37 38.23383099128594 40.0 37.0 40.0 37.0 40.0 38-39 38.193903106977956 40.0 37.0 40.0 37.0 40.0 40-41 38.16564711057143 40.0 37.0 40.0 37.0 40.0 42-43 38.13169261866123 40.0 37.0 40.0 37.0 40.0 44-45 38.032793771047864 40.0 37.0 40.0 35.0 40.0 46-47 37.6501012208702 40.0 37.0 40.0 33.0 40.0 48-49 37.82427415027199 40.0 37.0 40.0 33.0 40.0 50-51 37.84267096786924 40.0 37.0 40.0 33.0 40.0 52-53 37.81357048054455 40.0 37.0 40.0 33.0 40.0 54-55 37.722891065735865 40.0 37.0 40.0 33.0 40.0 56-57 37.556689564503515 40.0 37.0 40.0 33.0 40.0 58-59 37.39245954218868 38.5 37.0 40.0 33.0 40.0 60-61 37.21750432912597 37.0 37.0 40.0 33.0 40.0 62-63 37.085798410319406 37.0 37.0 40.0 33.0 40.0 64-65 36.91607031729849 37.0 37.0 40.0 33.0 40.0 66-67 36.71999630560114 37.0 37.0 40.0 33.0 40.0 68-69 36.525634598199254 37.0 37.0 40.0 33.0 40.0 70-71 36.3132667125267 37.0 37.0 40.0 33.0 40.0 72-73 36.04228825857036 37.0 37.0 37.0 33.0 40.0 74-75 35.71108594798483 37.0 35.0 37.0 33.0 40.0 76-77 33.51916694659451 35.0 33.0 37.0 27.0 37.0 78-79 35.2273426957963 37.0 33.0 37.0 33.0 37.0 80-81 35.45231908178768 37.0 33.0 37.0 33.0 37.0 82-83 35.28071340579043 37.0 33.0 37.0 33.0 37.0 84-85 35.12660370859819 37.0 33.0 37.0 33.0 37.0 86-87 35.02563323108035 37.0 33.0 37.0 33.0 37.0 88-89 34.84939108921232 37.0 33.0 37.0 33.0 37.0 90-91 34.78751837753424 37.0 33.0 37.0 33.0 37.0 92-93 34.82521175897388 37.0 33.0 37.0 33.0 37.0 94-95 34.80949180160603 37.0 33.0 37.0 33.0 37.0 96-97 34.80386253627992 37.0 33.0 37.0 33.0 37.0 98-99 34.809687186237504 37.0 33.0 37.0 33.0 37.0 100 34.75524541983266 37.0 33.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 6.0 18 6.0 19 21.0 20 46.0 21 241.0 22 832.0 23 2393.0 24 5952.0 25 11843.0 26 21604.0 27 35779.0 28 55157.0 29 78430.0 30 109232.0 31 150189.0 32 204696.0 33 281280.0 34 404155.0 35 625062.0 36 1220795.0 37 3191528.0 38 3472210.0 39 121720.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.44906573226885 20.63199339869395 14.952116314596346 21.966824554440862 2 14.670554539190238 21.217875167390062 42.80960732407457 21.30196296934513 3 17.644992707522885 27.913400896111597 31.464994858991265 22.976611537374257 4 11.83474721497422 18.34459018279976 39.81531395177208 30.005348650453932 5 12.312493276661321 38.49928576253293 35.65053148774038 13.537689473065367 6 27.97319170333753 38.86529556422258 19.18372289087302 13.97778984156687 7 24.709534257130493 34.40240964458243 23.81818591188486 17.06987018640222 8 24.12110265256037 36.37167366727792 21.46980314064349 18.03742053951822 9 25.85905880763621 16.549945337692975 22.175574829821354 35.41542102484946 10-11 23.857219775205834 27.26034406955623 28.827774938848492 20.054661216389437 12-13 25.068489072196932 25.19103858851139 29.425304265915088 20.31516807337659 14-15 22.030048304963305 26.180245399460595 28.36470107201154 23.42500522356456 16-17 20.1215009122225 29.275987934166274 28.920375264080207 21.682135889531015 18-19 19.952100313253766 27.572695607482544 32.323632646918256 20.151571432345435 20-21 21.227449659049825 26.65372169126819 32.36000007605469 19.758828573627298 22-23 20.90449910569154 26.543286361162906 32.22404921614021 20.328165317005354 24-25 20.321089620374817 26.795566033958035 32.45551517699824 20.42782916866891 26-27 20.30419522246806 27.08973575760781 32.24614697637297 20.35992204355116 28-29 20.23094406626925 27.41756126683827 32.02225412871754 20.32924053817494 30-31 20.623301705110052 27.25389218096553 31.84089324501048 20.28191286891393 32-33 20.269951739098875 27.52935429701693 31.812895779666743 20.387798184217452 34-35 20.36693635174615 27.694592520656748 31.63752403123079 20.30094709636631 36-37 20.521461304769502 27.641388411637546 31.48332439965093 20.353825883942022 38-39 20.520905325584383 27.775446078569576 31.3152214681582 20.38842712768784 40-41 20.781469802479783 27.7777355240711 31.075662219191997 20.36513245425712 42-43 20.81607556438906 27.959496784937667 30.54246569399817 20.681961956675103 44-45 20.875576022098056 28.419134071259773 29.863662574378928 20.84162733226324 46-47 21.11502317508971 28.318081318710338 29.265834826188318 21.301060680011634 48-49 21.280833951336653 28.56569706360137 28.86131784793587 21.29215113712611 50-51 21.1317260532454 28.670668402786028 28.717041819877377 21.480563724091194 52-53 21.35892282424273 28.698297686278977 28.422536938955652 21.520242550522646 54-55 21.343636620281348 28.726320949323046 28.401442257571013 21.52860017282459 56-57 21.454466603634962 28.84167917940763 28.22822939072408 21.47562482623333 58-59 21.43217580557325 28.729630459233864 28.406502965644663 21.431690769548222 60-61 21.447030944008304 28.657305851455284 28.40898061337102 21.48668259116539 62-63 21.47868822223054 28.66949122842481 28.246177757210088 21.605642792134557 64-65 21.45687565281696 28.685869621786747 28.251321973259163 21.605932752137125 66-67 21.53517845192664 28.746253087757367 27.974532953512966 21.74403550680303 68-69 21.631609416014776 28.545894313942526 28.17633349855709 21.64616277148561 70-71 21.53295168806017 28.18695756581698 28.139746566885375 22.140344179237477 72-73 21.699976238693917 28.259272390550716 28.28492748353152 21.755823887223848 74-75 21.57930637295645 28.44031253561699 28.169953228032856 21.810427863393702 76-77 21.54538821480237 28.287325619777846 28.03624650868156 22.131039656738224 78-79 21.777204339431147 28.23284460986826 28.058704596442833 21.931246454257757 80-81 21.708369478725263 28.09708183993815 28.164360210359668 22.030188470976924 82-83 21.925681344438676 27.924505218693884 28.24866124415028 21.901152192717166 84-85 22.21089321786635 27.87202570407567 28.095749110984247 21.82133196707373 86-87 21.766454199138856 28.051707571788466 28.129300711085747 22.05253751798693 88-89 22.055549915965386 27.852317114107976 28.021752583581204 22.070380386345434 90-91 22.19140776364491 27.71432577317331 28.11470170124664 21.979564761935144 92-93 22.19213051051826 27.74868638401953 27.980542103333516 22.078641002128688 94-95 21.896123988258168 27.743147803548634 28.156899071369857 22.20382913682334 96-97 22.09239775647484 27.798310578705156 28.245133162664104 21.864158502155906 98-99 23.207681040970673 29.701285606771684 28.35665281882653 18.734380533431118 100 22.28192510880678 30.428022380734927 22.26477014600241 25.025282364455887 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3353.0 1 3579.5 2 7057.5 3 10787.5 4 15068.5 5 26740.5 6 36232.5 7 41367.0 8 43631.0 9 40422.0 10 34268.5 11 28795.0 12 31163.5 13 42965.5 14 70999.5 15 110467.0 16 142004.5 17 158738.5 18 160042.5 19 148313.0 20 130267.0 21 109871.0 22 94369.5 23 89540.0 24 93830.5 25 107517.5 26 126734.0 27 145906.0 28 163539.5 29 182335.0 30 199634.0 31 215152.5 32 236173.0 33 257921.0 34 278331.0 35 295531.0 36 317472.0 37 345328.0 38 357045.5 39 355880.5 40 362669.5 41 371033.5 42 375617.0 43 384399.0 44 397791.5 45 414141.0 46 422773.5 47 422309.0 48 419428.0 49 413155.5 50 399080.0 51 382246.0 52 360304.5 53 335445.0 54 311135.5 55 278673.5 56 242683.0 57 203911.5 58 168709.0 59 140961.5 60 112329.5 61 86688.5 62 65432.0 63 47379.0 64 34608.0 65 25662.0 66 19341.0 67 14929.5 68 11322.5 69 8348.0 70 6243.0 71 4422.0 72 3330.0 73 2513.5 74 1800.5 75 1278.5 76 876.5 77 622.5 78 408.5 79 249.5 80 173.0 81 125.5 82 90.0 83 56.0 84 41.0 85 32.5 86 22.5 87 16.0 88 9.0 89 4.5 90 3.0 91 2.0 92 1.5 93 0.5 94 0.5 95 1.0 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 3.0020482975534204E-5 2 5.103482105840815E-4 3 2.0013655317022807E-5 4 2.0013655317022807E-5 5 2.0013655317022807E-5 6 2.0013655317022807E-5 7 2.0013655317022807E-5 8 2.0013655317022807E-5 9 2.0013655317022807E-5 10-11 0.0016861504604591712 12-13 0.008901073202245893 14-15 1.0006827658511404E-5 16-17 1.0006827658511404E-5 18-19 1.0006827658511404E-5 20-21 1.0007195173329624E-5 22-23 0.0 24-25 0.0 26-27 0.0 28-29 1.0027181684109283E-5 30-31 1.5075014781051993E-5 32-33 1.0088296300122376E-5 34-35 0.005874716078621442 36-37 0.04736299244324578 38-39 0.15323091041341314 40-41 0.18080719014727434 42-43 0.05571711302533927 44-45 0.005218083581094386 46-47 1.0866675508518306E-5 48-49 5.517886477321128E-6 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.015391500208448988 64-65 0.10491542837141694 66-67 0.22582732129447086 68-69 0.2496828003631795 70-71 0.11572633347855853 72-73 0.007466555233890002 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 205.0 20-21 964.0 22-23 2372.0 24-25 4382.0 26-27 8641.0 28-29 17914.0 30-31 35568.0 32-33 45332.0 34-35 58912.0 36-37 79033.0 38-39 98667.0 40-41 107826.0 42-43 132690.0 44-45 159946.0 46-47 146732.0 48-49 123506.0 50-51 102361.0 52-53 91325.0 54-55 97883.0 56-57 98617.0 58-59 96498.0 60-61 98702.0 62-63 91324.0 64-65 93508.0 66-67 105371.0 68-69 99739.0 70-71 102622.0 72-73 99333.0 74-75 96217.0 76-77 92699.0 78-79 96340.0 80-81 100837.0 82-83 103615.0 84-85 103893.0 86-87 107972.0 88-89 118326.0 90-91 116750.0 92-93 113871.0 94-95 131298.0 96-97 292331.0 98-99 542301.0 100-101 5776754.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 76.90613615486961 #Duplication Level Percentage of deduplicated Percentage of total 1 87.23390983891886 67.08822947393513 2 7.615103618705005 11.712963914671345 3 2.28396063112901 5.269517618099087 4 1.0523040590425603 3.2371455696419638 5 0.5751397685131213 2.2115888672675146 6 0.35270666609204027 1.6275184131122746 7 0.2252939484049708 1.2128540949630597 8 0.1466294902070909 0.9021366030548521 9 0.10276906460699893 0.7113214507657005 >10 0.4028782940282826 4.695282308326213 >50 0.006462913467535265 0.3285489780799864 >100 0.002203113892834726 0.29919545748389376 >500 2.554372179209646E-4 0.14411834886597266 >1k 3.8315577378270337E-4 0.5595789017329889 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.0013655317022804E-5 2 0.0 0.0 0.0 0.0 2.0013655317022804E-5 3 0.0 0.0 0.0 0.0 2.0013655317022804E-5 4 0.0 0.0 0.0 2.0013655317022804E-5 3.0020482975534207E-5 5 0.0 0.0 0.0 2.0013655317022804E-5 3.0020482975534207E-5 6 0.0 0.0 0.0 2.0013655317022804E-5 5.0034138292557014E-5 7 0.0 0.0 0.0 2.0013655317022804E-5 6.0040965951068415E-5 8 0.0 0.0 0.0 2.0013655317022804E-5 6.0040965951068415E-5 9 0.0 0.0 0.0 3.0020482975534207E-5 8.005462126809121E-5 10-11 5.0034138292557014E-5 0.0 0.0 3.0020482975534207E-5 8.005462126809121E-5 12-13 5.0034138292557014E-5 0.0 0.0 3.0020482975534207E-5 8.005462126809121E-5 14-15 5.0034138292557014E-5 0.0 0.0 3.0020482975534207E-5 1.0507169041436973E-4 16-17 5.0034138292557014E-5 0.0 0.0 3.502389680478991E-5 1.1007510424362543E-4 18-19 5.0034138292557014E-5 0.0 0.0 5.0034138292557014E-5 1.1007510424362543E-4 20-21 5.0034138292557014E-5 0.0 0.0 5.5037552121812715E-5 1.1507851807288113E-4 22-23 6.0040965951068415E-5 0.0 0.0 7.505120743883551E-5 1.3008875956064823E-4 24-25 6.0040965951068415E-5 0.0 0.0 8.505803509734692E-5 1.4009558721915963E-4 26-27 6.0040965951068415E-5 0.0 0.0 1.8512631168246096E-4 1.5010241487767103E-4 28-29 6.0040965951068415E-5 0.0 0.0 5.303618659011043E-4 1.6010924253618243E-4 30-31 6.0040965951068415E-5 0.0 0.0 0.0013409149062405278 1.6010924253618243E-4 32-33 6.0040965951068415E-5 0.0 0.0 0.003062089263504489 1.7011607019469383E-4 34-35 6.0040965951068415E-5 0.0 0.0 0.004998410415426445 1.8012289785320523E-4 36-37 6.0040965951068415E-5 0.0 0.0 0.007925407505541032 1.8012289785320523E-4 38-39 6.0040965951068415E-5 0.0 0.0 0.012863776955016407 1.8012289785320523E-4 40-41 6.0040965951068415E-5 0.0 0.0 0.018777812101196646 1.8012289785320523E-4 42-43 6.0040965951068415E-5 0.0 0.0 0.024331601451670473 1.8512631168246096E-4 44-45 6.0040965951068415E-5 0.0 0.0 0.030700947256312984 1.9012972551171666E-4 46-47 6.0040965951068415E-5 0.0 0.0 0.03792587682575821 2.1014338082873946E-4 48-49 6.0040965951068415E-5 0.0 0.0 0.0450657483601061 2.1014338082873946E-4 50-51 6.0040965951068415E-5 0.0 0.0 0.052100548204039615 2.1014338082873946E-4 52-53 6.0040965951068415E-5 0.0 0.0 0.059190385600094944 2.1514679465799516E-4 54-55 6.0040965951068415E-5 0.0 0.0 0.06540962898985977 2.3015703614576226E-4 56-57 6.0040965951068415E-5 0.0 0.0 0.07186403282959963 2.3015703614576226E-4 58-59 6.0040965951068415E-5 0.0 0.0 0.07824838887572991 2.3015703614576226E-4 60-61 6.0040965951068415E-5 0.0 0.0 0.08506804192500544 2.3015703614576226E-4 62-63 6.0040965951068415E-5 0.0 0.0 0.09169756524876924 2.3015703614576226E-4 64-65 6.0040965951068415E-5 0.0 0.0 0.09765663111941278 2.3015703614576226E-4 66-67 6.0040965951068415E-5 0.0 0.0 0.10393591547512868 2.4016386380427366E-4 68-69 6.0040965951068415E-5 0.0 0.0 0.11026023055530788 2.5017069146278506E-4 70-71 6.0040965951068415E-5 0.0 0.0 0.11540373997178274 2.5517410529204076E-4 72-73 6.0040965951068415E-5 0.0 0.0 0.11939146079369954 3.3022531273087626E-4 74-75 6.0040965951068415E-5 0.0 0.0 0.12272373440398385 3.3022531273087626E-4 76-77 6.0040965951068415E-5 0.0 0.0 0.12613606263553623 3.3022531273087626E-4 78-79 6.0040965951068415E-5 0.0 0.0 0.12819746913318958 3.3022531273087626E-4 80-81 6.0040965951068415E-5 0.0 0.0 0.12901802900118753 3.4523555421864336E-4 82-83 6.0040965951068415E-5 0.0 0.0 0.1295634011085764 3.7025262336492186E-4 84-85 6.0040965951068415E-5 0.0 0.0 0.12993365373194132 3.7025262336492186E-4 86-87 6.0040965951068415E-5 0.0 0.0 0.13007374931916046 3.7525603719417756E-4 88 6.0040965951068415E-5 0.0 0.0 0.13009876638830675 3.802594510234333E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 28835 0.0 47.561615 1 GTATCAA 53090 0.0 36.137676 1 ATCAACG 68650 0.0 27.703701 3 TATCAAC 68925 0.0 27.687668 2 TCAACGC 69420 0.0 27.408144 4 AACGCAG 69725 0.0 27.293167 6 CAACGCA 70040 0.0 27.15485 5 ACGCAGA 77545 0.0 24.521145 7 CGCAGAG 78135 0.0 24.335985 8 GCAGAGT 84150 0.0 22.402914 9 GAGTACT 58370 0.0 20.220387 12-13 GTACATG 48950 0.0 20.13342 1 TACATGG 48105 0.0 19.95396 2 ACATGGG 48210 0.0 19.454535 3 CAGAGTA 84260 0.0 19.293062 10-11 AGAGTAC 82340 0.0 19.132227 10-11 AGTACTT 62025 0.0 18.651417 12-13 CATGGGG 30910 0.0 18.31908 4 GTACTTT 64965 0.0 18.197613 14-15 GGTTCAC 4415 0.0 17.706154 6 >>END_MODULE