##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139094_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11829712 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.59076696034527 34.0 31.0 34.0 31.0 34.0 2 32.72140581275352 34.0 31.0 34.0 31.0 34.0 3 32.79191716586169 34.0 31.0 34.0 31.0 34.0 4 36.275857518762926 37.0 37.0 37.0 35.0 37.0 5 36.20717013229063 37.0 37.0 37.0 35.0 37.0 6 36.234539775778146 37.0 37.0 37.0 35.0 37.0 7 36.18335864812263 37.0 37.0 37.0 35.0 37.0 8 36.16135777439045 37.0 37.0 37.0 35.0 37.0 9 37.880844774581156 39.0 38.0 39.0 35.0 39.0 10-11 37.81614307262932 39.0 38.0 39.0 35.0 39.0 12-13 37.783625374818925 39.0 38.0 39.0 35.0 39.0 14-15 39.15583925458202 40.0 39.0 41.0 36.0 41.0 16-17 39.1203764301278 40.0 38.0 41.0 36.0 41.0 18-19 39.006206998107814 40.0 38.5 41.0 35.5 41.0 20-21 39.06774228563319 40.0 39.0 41.0 36.0 41.0 22-23 38.98256949014912 40.0 38.0 41.0 35.0 41.0 24-25 38.87136918391767 40.0 38.0 41.0 35.0 41.0 26-27 38.818873488261076 40.0 38.0 41.0 35.0 41.0 28-29 38.70886394628067 40.0 38.0 41.0 35.0 41.0 30-31 38.636500709551406 40.0 38.0 41.0 35.0 41.0 32-33 38.50228724501616 40.0 38.0 41.0 34.0 41.0 34-35 38.27286521145419 40.0 38.0 41.0 34.0 41.0 36-37 38.53383043275366 40.0 38.0 41.0 34.0 41.0 38-39 38.62667621262548 40.0 38.0 41.0 35.0 41.0 40-41 38.61533581708947 40.0 38.0 41.0 34.5 41.0 42-43 38.543070087460436 40.0 38.0 41.0 34.0 41.0 44-45 38.46409741484142 40.0 38.0 41.0 34.0 41.0 46-47 38.386711162126915 40.0 38.0 41.0 34.0 41.0 48-49 38.31574140210971 40.0 38.0 41.0 34.0 41.0 50-51 38.23211577236892 40.0 38.0 41.0 33.0 41.0 52-53 38.128382390350005 40.0 37.0 41.0 33.0 41.0 54-55 38.0037215021437 40.0 37.0 41.0 33.0 41.0 56-57 37.8498702121513 40.0 37.0 41.0 33.0 41.0 58-59 37.6760480709971 39.5 36.0 41.0 33.0 41.0 60-61 37.50281142048209 39.0 36.0 41.0 33.0 41.0 62-63 37.28092321212934 39.0 35.0 41.0 32.0 41.0 64-65 36.993195744907034 38.5 35.0 40.0 32.0 41.0 66-67 36.669760617222224 38.0 35.0 40.0 31.0 41.0 68-69 36.35256919907191 37.0 35.0 40.0 31.0 41.0 70-71 36.01165896650355 37.0 35.0 39.5 31.0 41.0 72-73 35.69588875367953 36.0 34.0 39.0 31.0 41.0 74-75 35.366413088905766 36.0 34.0 39.0 30.5 40.0 76-77 34.444740948615305 35.0 33.5 37.0 29.5 39.0 78-79 34.69762649232766 35.0 34.0 37.0 30.0 39.0 80-81 34.50700420828889 35.0 34.0 37.0 30.0 39.0 82-83 34.25965016604056 35.0 34.0 36.0 30.0 38.5 84-85 34.004900850840535 35.0 34.0 36.0 30.0 37.0 86-87 33.80176736638707 35.0 34.0 35.5 30.0 37.0 88-89 33.599891986843275 35.0 33.0 35.0 29.5 36.5 90-91 33.42084831715522 35.0 33.0 35.0 29.0 36.0 92-93 33.29063065480321 35.0 33.0 35.0 29.0 36.0 94-95 33.23783624424 35.0 33.0 35.0 29.0 36.0 96-97 33.233452226567536 35.0 33.0 35.0 29.0 35.0 98-99 33.31920131084569 35.0 33.0 35.0 29.5 35.0 100-101 31.722500429763237 33.0 30.0 34.5 25.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 0.0 16 1.0 17 0.0 18 2.0 19 8.0 20 40.0 21 334.0 22 1493.0 23 5217.0 24 13318.0 25 27345.0 26 48833.0 27 77358.0 28 112344.0 29 150801.0 30 194105.0 31 243820.0 32 308234.0 33 401398.0 34 555571.0 35 802328.0 36 1340231.0 37 2575935.0 38 3299543.0 39 1585217.0 40 86235.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.67908331472905 21.391143264808964 15.66093468571374 24.26883873474825 2 13.645853991898377 21.728465258190006 41.35645638593336 23.269224363978257 3 16.835446408758045 26.586928449906484 31.409077171811102 25.168547969524376 4 11.981038586832526 18.845856647868516 38.92409356815117 30.24901119714779 5 12.973100183613983 37.954822050145104 35.719847377479866 13.352230388761042 6 29.560930027949123 38.44676990786502 18.686435989253837 13.30586407493202 7 26.010293237137112 33.155904342194724 23.16396793868725 17.669834481980917 8 24.314903017081058 36.95682532254378 21.023749352477896 17.704522307897268 9 25.276953204086954 17.06845138086682 21.445718254053798 36.20887716099243 10-11 23.894759457125527 27.134399594981584 28.92793665509244 20.042904292800454 12-13 24.78624794806906 24.687145780653474 29.126865398486913 21.399740872790552 14-15 21.914519169376742 26.056240338343834 26.88999894586666 25.139241546412766 16-17 21.392382260790296 29.21174105455217 27.539708516798058 21.856168167859483 18-19 21.47848691797913 28.207752194073414 29.439003951830088 20.874756936117365 20-21 22.189551609899897 27.318293429983303 29.41886469112619 21.073290268990608 22-23 21.9327305964748 27.278754764283423 29.245486638532636 21.543028000709143 24-25 21.740008778399204 27.463481085577047 29.26342076737889 21.533089368644863 26-27 21.721815257403097 27.55390552973266 29.215474313752914 21.508804899111333 28-29 21.667695967632277 27.59325999548033 29.227923234908047 21.51112080197935 30-31 21.8369153427574 27.49066694430338 29.199382116654167 21.47303559628505 32-33 21.687543760125518 27.628797441938513 29.096808044878507 21.58685075305746 34-35 21.853438662700825 27.623547723371818 29.04649204166267 21.476521572264687 36-37 21.752685180679542 27.6166256498136 29.027886471416924 21.602802698089935 38-39 21.668863398807588 27.673703662869524 29.041618771713978 21.615814166608903 40-41 21.899556213952064 27.549814427991166 28.937445054514832 21.61318430354194 42-43 21.831466032941577 27.65739185044311 28.698979013955267 21.812163102660048 44-45 21.893630330650662 27.76461166303628 28.492261769487154 21.849496236825903 46-47 22.02661219135179 27.744145908160334 28.178074099979007 22.051167800508864 48-49 21.935119232140764 27.93180812194378 28.086187985131282 22.046884660784173 50-51 21.947666490435978 28.00118382915406 27.979356470724927 22.07179320968504 52-53 22.104438281574836 27.9281087189578 27.891197073442925 22.076255926024434 54-55 22.069416190610166 27.85675294937005 27.877113598432135 22.196717261587647 56-57 22.09883252023167 27.970009768687504 27.839977930516085 22.09117978056474 58-59 22.0294403430463 28.015538036553128 27.899508273690156 22.055513346710416 60-61 22.12727817303867 28.00842655943072 27.855431498711354 22.008863768819257 62-63 22.067981718292575 28.105543594165454 27.79576441824697 22.030710269295 64-65 22.053103078925663 28.069329972279544 27.739297632865224 22.138269315929573 66-67 22.09397441108724 28.078755589106326 27.63832917174767 22.188940828058765 68-69 22.06107946263987 28.010090469108214 27.7073529187351 22.221477149516822 70-71 22.074415217149987 27.844776466404053 27.761328905861326 22.319479410584634 72-73 22.11111370780448 27.825861547904896 27.707402393791746 22.355622350498873 74-75 22.02786189405441 27.92896227605518 27.67023020096198 22.372945628928427 76-77 22.195505224339744 27.893162832288482 27.60395835622809 22.30737358714368 78-79 22.160796710700982 27.878743785268888 27.566343703202445 22.394115800827688 80-81 22.16464603951705 27.878174800748095 27.564955288677677 22.392223871057176 82-83 22.194232915642786 27.843156367250728 27.629650414165113 22.33296030294137 84-85 22.243945776526335 27.839926002153923 27.649453588241407 22.26667463307834 86-87 22.170021795001418 27.836651801091545 27.698627977923117 22.29469842598392 88-89 22.1865748398584 27.763035210080496 27.713303736988493 22.337086213072613 90-91 22.204129092395313 27.797673102181868 27.70949091373605 22.28870689168677 92-93 22.24739949408298 27.704570337601268 27.782849485608736 22.26518068270701 94-95 22.109021456915134 27.7433119112212 27.81579252489232 22.33187410697135 96-97 22.079836266210858 27.76645685787719 27.885105813456708 22.26860106245524 98-99 22.18083452134282 28.31271489085843 27.92606012309581 21.580390464702937 100-101 20.57516223856442 31.869499149889087 25.857303829396333 21.698034782150163 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2864.0 1 2518.5 2 3171.5 3 4419.5 4 5865.0 5 8608.5 6 11041.5 7 13897.0 8 16526.0 9 17130.5 10 16009.0 11 15072.5 12 16984.5 13 22977.0 14 37237.5 15 56366.0 16 71192.5 17 78867.5 18 79477.5 19 74805.0 20 67968.0 21 61254.0 22 57958.5 23 61363.0 24 71061.0 25 86959.5 26 107644.0 27 129865.5 28 155670.0 29 184800.0 30 211867.0 31 238237.0 32 265862.5 33 292812.0 34 318911.0 35 342805.0 36 369031.0 37 393397.5 38 412504.0 39 428191.5 40 441830.0 41 456662.5 42 466308.0 43 471519.0 44 477010.5 45 481817.5 46 484459.5 47 483847.0 48 477463.5 49 467498.0 50 458050.0 51 444507.5 52 424522.0 53 402393.0 54 378641.5 55 352034.0 56 324285.0 57 293819.5 58 260783.5 59 225834.5 60 188217.0 61 153738.5 62 122712.5 63 94102.0 64 70008.0 65 52225.5 66 39503.5 67 29974.5 68 22652.5 69 16133.5 70 11323.0 71 8076.0 72 5510.5 73 3637.5 74 2400.5 75 1568.0 76 1026.5 77 644.0 78 432.0 79 298.0 80 205.0 81 141.0 82 97.0 83 63.0 84 43.0 85 31.5 86 25.5 87 20.0 88 16.5 89 14.0 90 10.0 91 7.0 92 5.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 2.5359873511713556E-5 2 0.004040673179533026 3 0.004962081917125286 4 2.5359873511713556E-5 5 2.5359873511713556E-5 6 2.5359873511713556E-5 7 2.5359873511713556E-5 8 0.0 9 0.0031023578595996255 10-11 0.001069341333077255 12-13 8.453291170571185E-6 14-15 7.523429141808356E-4 16-17 6.762632936456948E-5 18-19 2.5359873511713556E-5 20-21 1.2680319425699879E-5 22-23 6.213830591956132E-4 24-25 0.004156058078269186 26-27 0.021129898035976823 28-29 0.3332672691539294 30-31 0.3262361582806807 32-33 0.3376932950308661 34-35 0.17949621022408166 36-37 0.038712773150629445 38-39 0.03570743425170401 40-41 0.01273841875520864 42-43 0.01000114995800911 44-45 0.009134448403877067 46-47 0.005706978347564389 48-49 0.009077708410026378 50-51 0.009340152352480268 52-53 0.0029643188896781598 54-55 0.003609653617271959 56-57 0.0036250938987172805 58-59 0.00444867446754636 60-61 0.003038828084886793 62-63 0.001646674285026601 64-65 4.118921501594023E-4 66-67 0.006846791310526663 68-69 0.016362835960173266 70-71 0.013268595764002038 72-73 0.013965263591229696 74-75 0.0071185228505088 76-77 0.004487383949494494 78-79 0.0015159065778744154 80-81 0.001173874622051501 82-83 7.181056289026533E-4 84-85 1.122279454317802E-4 86-87 0.0 88-89 5.048297944398924E-4 90-91 0.004818618831206958 92-93 0.01842922097406192 94-95 0.001736274247343861 96-97 5.898530876508711E-6 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 213.0 20-21 741.0 22-23 1558.0 24-25 3956.0 26-27 5104.0 28-29 8438.0 30-31 23087.0 32-33 30240.0 34-35 44231.0 36-37 61909.0 38-39 71876.0 40-41 78076.0 42-43 93207.0 44-45 111628.0 46-47 110802.0 48-49 97340.0 50-51 87024.0 52-53 77711.0 54-55 86218.0 56-57 90934.0 58-59 93055.0 60-61 92908.0 62-63 94641.0 64-65 103661.0 66-67 109813.0 68-69 106998.0 70-71 104816.0 72-73 102859.0 74-75 105130.0 76-77 106510.0 78-79 112717.0 80-81 114629.0 82-83 113175.0 84-85 116337.0 86-87 123658.0 88-89 133498.0 90-91 145565.0 92-93 154081.0 94-95 179144.0 96-97 274228.0 98-99 1074801.0 100-101 7183195.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.09698091263292 #Duplication Level Percentage of deduplicated Percentage of total 1 89.43782250755328 75.21450852285159 2 7.229772325223539 12.160040504740111 3 1.7840273499726917 4.500939419948055 4 0.6906086807340308 2.323124201671535 5 0.3208740513361561 1.3492269485287955 6 0.17339313208273896 0.874910335148624 7 0.1003453303806673 0.5907117533586376 8 0.06404563030158951 0.4308835319208253 9 0.043986360471141156 0.3329208105261974 >10 0.15157711864940543 1.9548126085207465 >50 0.0029757626818990735 0.1648279065155656 >100 5.365592785393227E-4 0.08086779209261227 >500 3.5191334332759607E-5 0.022225664176720013 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.690658234114237E-5 2 0.0 1.690658234114237E-5 0.0 0.0 1.690658234114237E-5 3 0.0 1.690658234114237E-5 0.0 0.0 1.690658234114237E-5 4 0.0 5.9173038193998295E-5 0.0 0.0 1.690658234114237E-5 5 0.0 6.762632936456948E-5 0.0 0.0 1.690658234114237E-5 6 0.0 6.762632936456948E-5 0.0 0.0 1.690658234114237E-5 7 0.0 7.607962053514067E-5 0.0 0.0 1.690658234114237E-5 8 0.0 8.453291170571186E-5 0.0 0.0 2.5359873511713556E-5 9 0.0 2.3669215277599318E-4 0.0 0.0 3.381316468228474E-5 10-11 0.0 2.3669215277599318E-4 0.0 8.453291170571185E-6 3.381316468228474E-5 12-13 0.0 2.451454439465644E-4 0.0 8.453291170571185E-6 3.381316468228474E-5 14-15 4.226645585285592E-6 3.2122506448170504E-4 0.0 8.453291170571185E-6 4.226645585285593E-5 16-17 8.453291170571185E-6 3.2122506448170504E-4 0.0 3.803981026757033E-5 6.339968377928388E-5 18-19 8.453291170571185E-6 3.465849379934186E-4 0.0 6.762632936456949E-5 8.030626612042627E-5 20-21 8.453291170571185E-6 3.8885139384627456E-4 0.0 1.0143949404685422E-4 8.453291170571186E-5 22-23 8.453291170571185E-6 4.6493101438141525E-4 0.0 3.8039810267570333E-4 9.721284846156864E-5 24-25 1.2679936755856778E-5 5.071974702342711E-4 0.0 0.0012849002579268204 1.0989278521742541E-4 26-27 1.690658234114237E-5 5.241040525754135E-4 0.0 0.0036771816591984656 1.0989278521742541E-4 28-29 1.690658234114237E-5 5.325573437459847E-4 0.0 0.018800119563350315 1.14119430802711E-4 30-31 1.690658234114237E-5 6.33996837792839E-4 0.0 0.026678586934322658 1.1834607638799659E-4 32-33 4.226645585285593E-5 6.551300657192669E-4 0.0 0.030423394922885698 1.3525265872913898E-4 34-35 5.4946392608712704E-5 7.734761421072635E-4 0.0 0.035393930131181556 1.5215924107028135E-4 36-37 6.762632936456948E-5 8.791422817394034E-4 0.0 0.043318890603592036 1.5215924107028135E-4 38-39 6.762632936456948E-5 9.087288008364024E-4 0.0 0.05686951635001765 1.6906582341142372E-4 40-41 6.762632936456948E-5 0.0010397548139802557 0.0 0.08025977301898812 1.6906582341142372E-4 42-43 6.762632936456948E-5 0.001069341333077255 0.0 0.09266075116621605 1.6906582341142372E-4 44-45 6.762632936456948E-5 0.0012088206373916796 0.0 0.11010411749668969 1.732924689967093E-4 46-47 6.762632936456948E-5 0.0013313933593649616 0.0 0.13115703915699722 1.9019905133785167E-4 48-49 6.762632936456948E-5 0.0013356200049502473 0.0 0.14942882802218685 2.1133227926427964E-4 50-51 6.762632936456948E-5 0.0014412861445823873 0.0 0.1701562979724274 2.240122160201364E-4 52-53 8.453291170571186E-5 0.0014581927269235295 0.0 0.19219402805410646 2.409187983612788E-4 54-55 8.453291170571186E-5 0.0014962325371910999 0.0 0.25591493689787204 2.6205202628770674E-4 56-57 8.453291170571186E-5 0.001546952284214527 0.0 0.3043269354317333 2.916385453847059E-4 58-59 8.453291170571186E-5 0.001568085512140955 0.0 0.34176233538060774 3.043184821405627E-4 60-61 8.453291170571186E-5 0.0016103519679938109 0.0 0.3630350426113501 3.1277177331113387E-4 62-63 8.453291170571186E-5 0.0016483917782613813 0.0 0.38081654058864667 3.296783556522762E-4 64-65 9.298620287628304E-5 0.0019019905133785167 0.0 0.3895022972664085 3.296783556522762E-4 66-67 9.298620287628304E-5 0.0019188970957196591 0.0 0.3951533224139353 3.296783556522762E-4 68-69 9.298620287628304E-5 0.0019611635515725152 0.0 0.40109175946126163 3.3813164682284743E-4 70-71 9.298620287628304E-5 0.0019949767162548 0.0 0.4064046529619656 3.7194481150513216E-4 72-73 9.721284846156864E-5 0.002007656653010657 0.0 0.4108257242441743 4.057579761874169E-4 74-75 1.0143949404685422E-4 0.0020668296912046548 0.0 0.41468465166354007 4.057579761874169E-4 76-77 1.0143949404685422E-4 0.002151362602910367 0.0 0.4180532881950127 4.057579761874169E-4 78-79 1.0143949404685422E-4 0.002206308995519079 0.0 0.4209908068767862 4.057579761874169E-4 80-81 1.0143949404685422E-4 0.002206308995519079 0.0 0.42220808080534844 4.142112673579881E-4 82-83 1.0143949404685422E-4 0.002210535641104365 0.0 0.4226349720094623 4.4802443204027285E-4 84-85 1.0989278521742541E-4 0.002240122160201364 0.0 0.42294774378277344 4.4802443204027285E-4 86-87 1.0989278521742541E-4 0.002290841907224791 0.0 0.42308722308708785 4.56477723210844E-4 88-89 1.0989278521742541E-4 0.0024556810850509293 0.0 0.42313794283411127 4.6915765996670075E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 16065 0.0 52.772648 1 GTATCAA 29595 0.0 37.121002 1 TCAACGC 36955 0.0 29.034754 4 ATCAACG 37275 0.0 28.820982 3 TATCAAC 38260 0.0 28.246523 2 CAACGCA 38210 0.0 28.081112 5 AACGCAG 38990 0.0 27.552107 6 ACGCAGA 44980 0.0 23.920849 7 CGCAGAG 45365 0.0 23.670912 8 GTGGTAT 7625 0.0 21.053286 1 GCAGAGT 52550 0.0 20.345589 9 GTACATG 34480 0.0 20.228561 1 TGGTATC 7200 0.0 20.16695 2 GAGTACT 31795 0.0 19.819042 12-13 TACATGG 35250 0.0 19.400135 2 AGAGTAC 47765 0.0 18.821917 10-11 ACATGGG 35720 0.0 18.631878 3 CAGAGTA 51285 0.0 18.50971 10-11 GTACTTT 35165 0.0 17.85379 14-15 AGTACTT 34715 0.0 17.287321 12-13 >>END_MODULE