##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139074_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10942335 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.588749476231534 34.0 31.0 34.0 31.0 34.0 2 32.72145817140491 34.0 31.0 34.0 31.0 34.0 3 32.70882905705226 34.0 31.0 34.0 31.0 34.0 4 36.224063693900796 37.0 35.0 37.0 35.0 37.0 5 36.18045974648007 37.0 35.0 37.0 35.0 37.0 6 36.22276086411173 37.0 37.0 37.0 35.0 37.0 7 36.18251049707398 37.0 37.0 37.0 35.0 37.0 8 36.159207335545844 37.0 37.0 37.0 35.0 37.0 9 37.8955748475988 39.0 38.0 39.0 35.0 39.0 10-11 37.82674424608642 39.0 38.0 39.0 35.0 39.0 12-13 37.79812832453037 39.0 38.0 39.0 35.0 39.0 14-15 39.15295172374087 40.0 39.0 41.0 36.0 41.0 16-17 39.12110472764725 40.0 38.5 41.0 36.0 41.0 18-19 39.083882873262425 40.0 38.5 41.0 36.0 41.0 20-21 39.069823236817655 40.0 39.0 41.0 36.0 41.0 22-23 38.954351965060866 40.0 38.0 41.0 35.0 41.0 24-25 38.815186784790754 40.0 38.0 41.0 35.0 41.0 26-27 38.767381335465046 40.0 38.0 41.0 34.5 41.0 28-29 38.712913416372274 40.0 38.0 41.0 35.0 41.0 30-31 38.65074488273751 40.0 38.0 41.0 35.0 41.0 32-33 38.54087099452103 40.0 38.0 41.0 34.5 41.0 34-35 38.348455643867595 40.0 38.0 41.0 34.0 41.0 36-37 38.4826702108245 40.0 38.0 41.0 34.0 41.0 38-39 38.46140582119346 40.0 38.0 41.0 34.0 41.0 40-41 38.43438734294041 40.0 38.0 41.0 34.0 41.0 42-43 38.47186502814952 40.0 38.0 41.0 34.0 41.0 44-45 38.4142795476407 40.0 38.0 41.0 34.0 41.0 46-47 38.358220078549735 40.0 38.0 41.0 34.0 41.0 48-49 38.20652299414445 40.0 38.0 41.0 33.0 41.0 50-51 38.204608242357 40.0 38.0 41.0 33.0 41.0 52-53 38.12166773320362 40.0 37.0 41.0 33.0 41.0 54-55 37.97726829384807 40.0 37.0 41.0 33.0 41.0 56-57 37.80829312897325 40.0 37.0 41.0 33.0 41.0 58-59 37.64999748178202 39.5 36.0 41.0 33.0 41.0 60-61 37.46278846997662 39.0 36.0 41.0 32.0 41.0 62-63 37.258728787845584 39.0 35.5 40.5 32.0 41.0 64-65 36.97699236470059 38.5 35.0 40.0 31.5 41.0 66-67 36.6296287346442 38.0 35.0 40.0 31.0 41.0 68-69 36.30307398073133 37.5 35.0 40.0 31.0 41.0 70-71 36.00351425745319 37.0 35.0 39.5 31.0 41.0 72-73 35.68032157459361 36.0 34.0 39.0 30.5 41.0 74-75 35.31153467217794 36.0 34.0 39.0 30.0 40.0 76-77 34.34215857604477 35.0 33.0 37.0 29.0 39.0 78-79 34.62158731870356 35.0 34.0 37.0 30.0 39.0 80-81 34.419885077942425 35.0 34.0 37.0 30.0 39.0 82-83 34.13796282419274 35.0 34.0 36.0 29.0 38.5 84-85 33.88533532903334 35.0 33.5 36.0 29.0 37.0 86-87 33.64010046601141 35.0 33.0 35.5 29.0 37.0 88-89 33.397641661989915 35.0 33.0 35.0 29.0 36.5 90-91 33.21043145175273 35.0 33.0 35.0 29.0 36.0 92-93 33.11651758725039 35.0 33.0 35.0 29.0 36.0 94-95 33.036007054009175 34.5 33.0 35.0 29.0 36.0 96-97 33.01474532901855 34.0 32.5 35.0 29.0 35.0 98-99 33.13070156926155 34.0 33.0 35.0 29.0 35.0 100-101 31.255681108951144 32.5 29.0 34.5 25.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 0.0 19 9.0 20 44.0 21 306.0 22 1494.0 23 5194.0 24 12969.0 25 26725.0 26 47150.0 27 74258.0 28 106680.0 29 143104.0 30 183571.0 31 232449.0 32 292945.0 33 382196.0 34 527577.0 35 762717.0 36 1268774.0 37 2367650.0 38 2963282.0 39 1459061.0 40 84177.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.273236612338515 21.663195590921973 15.605200463191899 24.45836733354761 2 13.408368575321822 21.737274951857987 41.92278119889424 22.93157527392595 3 16.67285212394834 26.86090799832175 31.609145874101984 24.857094003627928 4 11.702372074660584 19.111568661855987 39.20567119221518 29.980388071268248 5 12.686937968347333 38.14033990740366 36.083356264153174 13.08936586009583 6 29.080221824703944 38.90665373584831 18.890375673051103 13.122748766396638 7 25.670174724165314 33.25405103280991 23.3787620976258 17.697012145398975 8 23.913371681032583 37.347324620140455 21.35528855178429 17.38401514704267 9 25.012762359474678 17.027820572832088 21.649713854466516 36.30970321322672 10-11 23.508779240889396 27.241292601746146 29.333924981255116 19.91600317610934 12-13 24.408223093279567 24.73622672178144 29.43795324858482 21.417596936354172 14-15 21.576180798585455 26.277030656631723 27.037382823973537 25.109405720809285 16-17 21.110435688997804 29.511950074430217 27.703956318919122 21.673657917652857 18-19 21.078549505201586 28.484870916490856 29.571151861097288 20.865427717210267 20-21 21.782904458241312 27.526777171282824 29.564824728604638 21.12549364187122 22-23 21.487150656825857 27.711655057844254 29.389465633449785 21.411728651880104 24-25 21.351524635135092 27.85661900294364 29.528650984928174 21.263205376993092 26-27 21.27306975804698 28.00479910142149 29.427458475110036 21.294672665421498 28-29 21.05394797643048 27.868643495782347 29.488078385258966 21.58933014252821 30-31 21.32675720693371 27.71457708835321 29.541665625326186 21.4170000793869 32-33 21.14906152849705 27.895105259561927 29.502833581918996 21.452999630022028 34-35 21.282149063004788 28.13364202595863 29.506708004025995 21.07750090701059 36-37 21.371954751174762 27.990193139472186 29.190921515878575 21.446930593474477 38-39 21.36565598473438 27.9158901943705 29.31682535782868 21.40162846306644 40-41 21.47529773373356 27.841554700576253 29.284801715090907 21.398345850599274 42-43 21.521913687956694 27.906788933145815 29.138864571637583 21.43243280725991 44-45 21.521796952973247 28.102560602200754 28.85042311777041 21.525219327055588 46-47 21.703946872046693 27.979554838008227 28.43823031015654 21.878267979788543 48-49 21.671870464239475 28.10340589514237 28.397899821174793 21.82682381944336 50-51 21.521332944408485 28.244472087172067 28.39994895973624 21.834246008683213 52-53 21.6029093537441 28.287901012457866 28.442690006798433 21.6664996269996 54-55 21.603290879402476 28.265150752378954 28.281830598428904 21.84972776978967 56-57 21.814582065114585 28.38826517913861 28.043891874561695 21.753260881185113 58-59 21.53064576714531 28.572446076311923 28.339530090047372 21.557378066495392 60-61 21.81885431374165 28.65774215488847 27.984830877294637 21.538572654075246 62-63 21.57919730153159 28.85361794573244 27.928091057397115 21.639093695338858 64-65 21.568408969095014 28.695814719948785 28.007021807128478 21.728754503827716 66-67 21.64744439441122 28.588011263818153 27.94636156264336 21.818182779127266 68-69 21.663043305553906 28.464392686354778 28.01347561853441 21.85908838955691 70-71 21.6604687291882 28.251271660095433 28.109793354355357 21.978466256361006 72-73 21.725338511606076 28.242906157734055 28.101485147567264 21.930270183092603 74-75 21.66184078224381 28.303070001038716 28.046751495873075 21.9883377208444 76-77 21.73631827337139 28.241167910366844 28.00538207645352 22.01713173980825 78-79 21.66562564875166 28.24177953909064 28.001405034968702 22.091189777188998 80-81 21.68031499217384 28.28199353876882 27.998838237440232 22.03885323161711 82-83 21.72136063320776 28.228482644418158 28.074750204341132 21.97540651803295 84-85 21.85722289993876 28.18423034861337 28.046755086179804 21.91179166526807 86-87 21.69666036358809 28.166107462483815 28.142745251324282 21.994486922603816 88-89 21.746293394597892 28.09465833029334 28.146599234615444 22.012449040493326 90-91 21.76123427918319 28.14072656524488 28.151285288485532 21.9467538670864 92-93 21.749025563729933 28.04691800004719 28.23568830472994 21.968368131492937 94-95 21.597822809364313 28.058413767476576 28.310024864984314 22.033738558174797 96-97 21.51723216344817 28.17606869548707 28.361106406774816 21.945592734289935 98-99 21.69979003638171 28.66108364609693 28.418282766283365 21.220843551237998 100-101 20.26540712031664 32.18743654076164 26.28362612787169 21.263530211050025 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1949.0 1 1790.0 2 2592.0 3 3802.0 4 5359.0 5 8399.5 6 10822.0 7 12954.5 8 14570.5 9 14593.0 10 13455.5 11 12558.0 12 14250.5 13 19905.0 14 33279.5 15 51224.0 16 65326.5 17 72585.5 18 73435.0 19 69732.5 20 63978.0 21 58620.0 22 56517.5 23 60522.0 24 70569.0 25 86656.5 26 107574.5 27 130600.5 28 155762.0 29 182990.0 30 209961.5 31 237194.5 32 264631.5 33 289701.5 34 315198.5 35 340729.0 36 365504.0 37 387505.5 38 403697.5 39 416238.5 40 427588.0 41 437515.0 42 443607.5 43 448712.5 44 454890.0 45 463996.5 46 475167.0 47 478496.5 48 465798.5 49 449283.5 50 434174.5 51 410861.0 52 382046.0 53 353226.5 54 327832.5 55 300607.5 56 270950.5 57 241170.0 58 209552.0 59 177176.0 60 145660.5 61 117002.0 62 91187.5 63 69137.0 64 50894.0 65 37455.5 66 28016.0 67 21341.5 68 16266.0 69 11699.5 70 8510.5 71 6187.0 72 4319.0 73 2946.5 74 2000.5 75 1336.0 76 856.5 77 528.5 78 357.5 79 255.0 80 164.5 81 108.0 82 75.5 83 53.0 84 40.0 85 28.5 86 22.5 87 17.5 88 11.0 89 7.5 90 4.0 91 1.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 1.8277634526817175E-5 2 0.016331066449711145 3 1.8277634526817175E-5 4 1.370822589511288E-4 5 1.8277634526817175E-5 6 9.138817263408588E-6 7 1.8277634526817175E-5 8 9.138817263408588E-6 9 9.138817263408588E-6 10-11 1.507904848462417E-4 12-13 7.128277465458698E-4 14-15 3.381362387461177E-4 16-17 0.0018871657648938732 18-19 0.0 20-21 0.0 22-23 2.3306551668180148E-4 24-25 0.00941111942728836 26-27 0.019938927718209414 28-29 0.34798721618003103 30-31 0.32388714024401555 32-33 0.31759458973976995 34-35 0.18773225703671406 36-37 0.0478622506762144 38-39 0.0390933232743414 40-41 0.01746834558801841 42-43 0.016101984137989193 44-45 0.019012218407986788 46-47 0.013568382073330517 48-49 0.008414652721746857 50-51 0.005270290729514524 52-53 0.002350020088722145 54-55 3.432464739011051E-4 56-57 6.22342403455245E-4 58-59 0.0019503002702558948 60-61 0.0021534088462035403 62-63 7.387546177975493E-4 64-65 3.602788119404126E-4 66-67 0.003250292328120974 68-69 0.00528001859080102 70-71 0.006762109423264557 72-73 0.010963998494241085 74-75 0.00821398866591171 76-77 0.006343485723608123 78-79 0.0038047342540111816 80-81 0.004761282895629131 82-83 0.0017556862360399042 84-85 0.0 86-87 0.0 88-89 0.0 90-91 0.002385159915161885 92-93 0.015470991205000494 94-95 0.001273641573698792 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 191.0 20-21 714.0 22-23 1478.0 24-25 3110.0 26-27 4570.0 28-29 8260.0 30-31 22577.0 32-33 29999.0 34-35 44209.0 36-37 59594.0 38-39 70058.0 40-41 75477.0 42-43 89944.0 44-45 106253.0 46-47 104627.0 48-49 91880.0 50-51 82732.0 52-53 74625.0 54-55 85526.0 56-57 92501.0 58-59 94482.0 60-61 97494.0 62-63 99855.0 64-65 110038.0 66-67 118534.0 68-69 105803.0 70-71 99799.0 72-73 97978.0 74-75 99133.0 76-77 100416.0 78-79 106246.0 80-81 108170.0 82-83 108178.0 84-85 112041.0 86-87 118932.0 88-89 128351.0 90-91 140431.0 92-93 152528.0 94-95 183375.0 96-97 278750.0 98-99 1035880.0 100-101 6397596.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 82.92907977449858 #Duplication Level Percentage of deduplicated Percentage of total 1 88.64059177224246 73.50882706339057 2 7.4811020263885055 12.408018134950707 3 2.0862567602003135 5.1903405989021625 4 0.8133852013047959 2.69813144985608 5 0.3692009509111681 1.5308747555466498 6 0.1994674351151653 0.9924990503448096 7 0.11637372666847529 0.6755536243781975 8 0.08523270180780806 0.5654615622092611 9 0.0525567914211995 0.3922637713614302 >10 0.1537675313171643 1.8691559511699862 >50 0.0016914300487497912 0.09097574284565291 >100 3.3573509034715677E-4 0.05165967236907136 >500 3.793748378573324E-5 0.026238622675395326 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8277634526817175E-5 2 0.0 0.0 0.0 0.0 1.8277634526817175E-5 3 0.0 0.0 0.0 0.0 1.8277634526817175E-5 4 9.138817263408588E-6 9.138817263408588E-6 0.0 1.8277634526817175E-5 1.8277634526817175E-5 5 1.8277634526817175E-5 1.8277634526817175E-5 0.0 1.8277634526817175E-5 1.8277634526817175E-5 6 1.8277634526817175E-5 1.8277634526817175E-5 0.0 4.5694086317042936E-5 2.741645179022576E-5 7 2.741645179022576E-5 1.8277634526817175E-5 0.0 4.5694086317042936E-5 2.741645179022576E-5 8 2.741645179022576E-5 1.8277634526817175E-5 0.0 4.5694086317042936E-5 2.741645179022576E-5 9 3.655526905363435E-5 2.741645179022576E-5 0.0 4.5694086317042936E-5 2.741645179022576E-5 10-11 5.026349494874723E-5 2.741645179022576E-5 0.0 5.026349494874723E-5 2.741645179022576E-5 12-13 5.483290358045152E-5 2.741645179022576E-5 0.0 7.31105381072687E-5 2.741645179022576E-5 14-15 5.483290358045152E-5 3.655526905363435E-5 0.0 7.31105381072687E-5 8.681876400238158E-5 16-17 5.483290358045152E-5 3.655526905363435E-5 0.0 9.138817263408587E-5 1.2794344168772022E-4 18-19 5.940231221215581E-5 3.655526905363435E-5 0.0 1.0509639852919875E-4 1.507904848462417E-4 20-21 8.224935537067728E-5 3.655526905363435E-5 0.0 1.416516675828331E-4 1.6449871074135456E-4 22-23 1.0052698989749445E-4 5.483290358045152E-5 0.0 3.518444646412306E-4 1.8734575389987602E-4 24-25 1.0052698989749445E-4 7.311053810726869E-5 0.0 0.0010646722111871004 2.010539797949889E-4 26-27 1.0052698989749445E-4 8.224935537067728E-5 0.0 0.003303682440722204 2.010539797949889E-4 28-29 1.0509639852919875E-4 8.224935537067728E-5 0.0 0.018382730925346372 2.2390102295351039E-4 30-31 1.0966580716090304E-4 8.224935537067728E-5 0.0 0.025913116350395046 2.3760924884862325E-4 32-33 1.0966580716090304E-4 8.224935537067728E-5 0.0 0.028398874646042183 2.5588688337544043E-4 34-35 1.1880462442431162E-4 8.681876400238158E-5 0.0 0.03163858536592053 2.65025700638849E-4 36-37 1.1880462442431162E-4 9.138817263408587E-5 0.0 0.03710359808943886 2.65025700638849E-4 38-39 1.507904848462417E-4 9.138817263408587E-5 0.0 0.04667650917285936 2.65025700638849E-4 40-41 1.6906811937305886E-4 1.0052698989749445E-4 0.0 0.06427330181355259 2.741645179022576E-4 42-43 1.7363752800476315E-4 1.0052698989749445E-4 0.0 0.07335728617338072 2.9244215242907475E-4 44-45 1.7363752800476315E-4 1.0509639852919875E-4 0.0 0.08581806351203833 3.152891955875962E-4 46-47 1.7363752800476315E-4 1.0966580716090304E-4 0.0 0.10127180350446226 3.335668301144134E-4 48-49 1.7363752800476315E-4 1.0966580716090304E-4 0.0 0.11504857052905071 3.655526905363435E-4 50-51 1.8277634526817175E-4 1.370822589511288E-4 0.0 0.1311374583212815 3.655526905363435E-4 52-53 1.8277634526817175E-4 1.416516675828331E-4 0.0 0.14806254789311424 3.838303250631607E-4 54-55 1.8277634526817175E-4 1.507904848462417E-4 0.0 0.21088734717041657 4.1581618548509067E-4 56-57 1.8734575389987604E-4 1.6449871074135456E-4 0.0 0.25029849661886605 4.386632286436122E-4 58-59 1.9191516253158034E-4 1.6449871074135456E-4 0.0 0.29909978080546795 4.4780204590702077E-4 60-61 1.9191516253158034E-4 1.6906811937305886E-4 0.0 0.3205805707831098 4.5694086317042936E-4 62-63 1.9191516253158034E-4 1.7363752800476315E-4 0.0 0.3319309818242633 4.6607968043383796E-4 64-65 1.9191516253158034E-4 1.9191516253158034E-4 0.0 0.3427924661418244 4.6607968043383796E-4 66-67 1.9191516253158034E-4 1.964845711632846E-4 0.0 0.3497333978533832 4.706490890655422E-4 68-69 1.9191516253158034E-4 2.010539797949889E-4 0.0 0.35594322418386937 4.752184976972465E-4 70-71 1.9191516253158034E-4 2.010539797949889E-4 0.0 0.3616458461562363 4.843573149606551E-4 72-73 2.101927970583975E-4 2.010539797949889E-4 0.0 0.36641173935910387 5.574678530679238E-4 74-75 2.193316143218061E-4 2.056233884266932E-4 0.0 0.3702409037924721 5.574678530679238E-4 76-77 2.193316143218061E-4 2.2390102295351039E-4 0.0 0.37350803096414065 5.574678530679238E-4 78-79 2.193316143218061E-4 2.2847043158521468E-4 0.0 0.3767386028667556 5.574678530679238E-4 80-81 2.193316143218061E-4 2.2847043158521468E-4 0.0 0.37819624422026926 5.75745487594741E-4 82-83 2.193316143218061E-4 2.2847043158521468E-4 0.0 0.3786806015352299 5.940231221215581E-4 84-85 2.193316143218061E-4 2.2847043158521468E-4 0.0 0.37905986245166134 5.940231221215581E-4 86-87 2.193316143218061E-4 2.2847043158521468E-4 0.0 0.3792563470228246 6.031619393849667E-4 88-89 2.2390102295351039E-4 2.65025700638849E-4 0.0 0.3793066105177734 6.168701652800796E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14075 0.0 49.467525 1 GTATCAA 25650 0.0 36.28612 1 ATCAACG 31435 0.0 29.052605 3 TCAACGC 31590 0.0 28.963642 4 CAACGCA 32525 0.0 28.13102 5 TATCAAC 32970 0.0 27.934612 2 AACGCAG 33465 0.0 27.480455 6 CTTATAC 12475 0.0 24.530163 1 ACGCAGA 38330 0.0 23.904198 7 CGCAGAG 38390 0.0 23.789669 8 TATACAC 16880 0.0 20.733862 3 GCAGAGT 44650 0.0 20.416687 9 GTACATG 30575 0.0 19.961882 1 TACATGG 30270 0.0 19.491848 2 GAGTACT 26810 0.0 19.251028 12-13 AGAGTAC 40535 0.0 18.788565 10-11 TTATACA 17475 0.0 18.74677 2 ACATGGG 30725 0.0 18.62224 3 CAGAGTA 43920 0.0 18.058397 10-11 CATGGGG 21925 0.0 17.140383 4 >>END_MODULE