##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2139066_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10929001 Sequences flagged as poor quality 0 Sequence length 19-101 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.47504213788616 34.0 31.0 34.0 31.0 34.0 2 32.61066688528988 34.0 31.0 34.0 31.0 34.0 3 32.66917186666924 34.0 31.0 34.0 31.0 34.0 4 36.19444686664408 37.0 35.0 37.0 35.0 37.0 5 36.11188131467826 37.0 35.0 37.0 35.0 37.0 6 36.14598589569166 37.0 36.0 37.0 35.0 37.0 7 36.09582056036046 37.0 36.0 37.0 35.0 37.0 8 36.06978808035611 37.0 35.0 37.0 35.0 37.0 9 37.783715821784625 39.0 38.0 39.0 35.0 39.0 10-11 37.711882449274185 39.0 37.5 39.0 35.0 39.0 12-13 37.65591795627066 39.0 37.0 39.0 35.0 39.0 14-15 38.995369155881676 40.0 38.0 41.0 35.5 41.0 16-17 38.9663749687643 40.0 38.0 41.0 35.0 41.0 18-19 38.96204589056218 40.0 38.0 41.0 35.0 41.0 20-21 38.93250816444176 40.0 38.0 41.0 35.0 41.0 22-23 38.82732294969576 40.0 38.0 41.0 35.0 41.0 24-25 38.69648746528412 40.0 38.0 41.0 34.0 41.0 26-27 38.62175014751169 40.0 38.0 41.0 34.5 41.0 28-29 38.562338804151395 40.0 38.0 41.0 34.0 41.0 30-31 38.48826816815931 40.0 38.0 41.0 34.0 41.0 32-33 38.38675770776287 40.0 38.0 41.0 34.0 41.0 34-35 38.282763370028874 40.0 38.0 41.0 34.0 41.0 36-37 38.42261046326258 40.0 38.0 41.0 34.0 41.0 38-39 38.48434186942846 40.0 38.0 41.0 34.0 41.0 40-41 38.42370439102993 40.0 38.0 41.0 34.0 41.0 42-43 38.391781339897065 40.0 38.0 41.0 34.0 41.0 44-45 38.36277883586283 40.0 38.0 41.0 34.0 41.0 46-47 38.27133890707862 40.0 38.0 41.0 33.0 41.0 48-49 38.19815283901833 40.0 38.0 41.0 33.0 41.0 50-51 38.12245630685573 40.0 37.5 41.0 33.0 41.0 52-53 38.05592122466779 40.0 37.0 41.0 33.0 41.0 54-55 37.93399628893332 40.0 37.0 41.0 33.0 41.0 56-57 37.77497265544457 40.0 36.5 41.0 33.0 41.0 58-59 37.654718518608426 39.5 36.0 41.0 33.0 41.0 60-61 37.50256845622552 39.0 36.0 41.0 32.5 41.0 62-63 37.287220274494345 39.0 35.5 41.0 32.0 41.0 64-65 36.97194602308376 38.5 35.0 40.0 31.5 41.0 66-67 36.68096443337123 38.0 35.0 40.0 31.0 41.0 68-69 36.409457613543054 37.5 35.0 40.0 31.0 41.0 70-71 36.10274398967674 37.0 35.0 39.5 31.0 41.0 72-73 35.793743409296255 36.5 34.5 39.0 31.0 41.0 74-75 35.46822112112688 36.0 34.0 39.0 30.5 40.0 76-77 34.487023161029086 35.0 33.5 37.0 29.5 39.0 78-79 34.805861966441256 35.0 34.0 37.0 30.0 39.0 80-81 34.649452873149514 35.0 34.0 37.0 30.0 39.0 82-83 34.40847593964577 35.0 34.0 36.5 30.0 39.0 84-85 34.146187801471065 35.0 34.0 36.0 30.0 37.5 86-87 33.91772841228872 35.0 34.0 36.0 30.0 37.0 88-89 33.70901588768233 35.0 34.0 35.0 30.0 37.0 90-91 33.53787078546554 35.0 33.0 35.0 29.5 36.0 92-93 33.406723433685556 35.0 33.0 35.0 29.0 36.0 94-95 33.346563322630786 35.0 33.0 35.0 29.0 36.0 96-97 33.36255769404073 35.0 33.0 35.0 30.0 35.5 98-99 33.40753909400179 35.0 33.0 35.0 30.0 35.0 100-101 31.929739808232988 33.5 31.0 34.5 27.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 4.0 19 9.0 20 51.0 21 393.0 22 1857.0 23 5989.0 24 14540.0 25 29718.0 26 51847.0 27 79835.0 28 113671.0 29 149935.0 30 190869.0 31 238294.0 32 297264.0 33 383116.0 34 520598.0 35 735843.0 36 1192369.0 37 2257896.0 38 3052800.0 39 1531437.0 40 80664.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.23861286485497 21.72825510110715 15.638118766584316 24.395013267453564 2 13.492213629934295 21.720885940695368 41.77761975167632 23.009280677694022 3 16.74381919663281 26.756061853783514 31.65626315307896 24.843855796504712 4 11.793320523378169 19.018107786622746 38.95533900631348 30.233232683685607 5 12.558989843535548 38.23199743800897 36.19102388141642 13.017988837039072 6 29.27662183182359 38.91332235337177 18.68611034861378 13.123945466190868 7 25.65623570317504 33.2287125995059 23.366282368011714 17.748769329307347 8 23.956718459445653 37.49075510195305 21.2721089512207 17.280417487380596 9 24.972218412277574 16.944979692105434 21.606082751753796 36.47671914386319 10-11 23.5405656164905 27.262086236933797 29.31662299065968 19.880725155916025 12-13 24.427107402444484 24.730196058301104 29.437412499094712 21.405284040159707 14-15 21.53085242230851 26.31601292561549 27.044986566012103 25.1081480860639 16-17 21.096182533060432 29.537072967602434 27.696218529031153 21.670525970305977 18-19 21.10075294164581 28.517327430018536 29.608708060325 20.77321156801065 20-21 21.86185076612066 27.632349376605358 29.49257322348975 21.01322663378423 22-23 21.49758318166592 27.74804216461598 29.39898982342431 21.355384830293787 24-25 21.42573965230966 27.83762190842576 29.45455765399047 21.282080785274115 26-27 21.467463031813512 27.991974495994942 29.38426105116463 21.156301421026917 28-29 21.251744190910067 27.939306982472278 29.452858836800356 21.3560899898173 30-31 21.432697065071558 27.844676980080884 29.492073575272908 21.23055237957465 32-33 21.139704059822016 27.77021221925805 29.666016009675882 21.424067711244057 34-35 21.20312855342138 27.92843950867896 29.44570367511639 21.422728262783263 36-37 21.31572219752504 27.959165021899274 29.457264049241065 21.267848731334617 38-39 21.314540856704298 27.92582056412562 29.41810098299536 21.34153759617472 40-41 21.50954618260328 27.862212158203732 29.305661357450337 21.32258030174265 42-43 21.53687884785793 27.900779210201847 29.190565575206733 21.371776366733485 44-45 21.511897507316057 28.19807715628258 28.8548730243594 21.43515231204196 46-47 21.70055615972447 27.995744197545992 28.461182251479215 21.84251739125032 48-49 21.632066247714903 28.12472408420034 28.461220352079625 21.78198931600513 50-51 21.49759264935777 28.24122700728129 28.474379748828323 21.78680059453262 52-53 21.59136528649402 28.306040295817862 28.47280075338817 21.629793664299942 54-55 21.627869210285066 28.285143031761965 28.301941390342318 21.78504636761065 56-57 21.82706555948058 28.410936537458188 28.041355738353978 21.72064216470725 58-59 21.50162156640588 28.71908259509228 28.34106980651085 21.438226031990986 60-61 21.83030416524402 28.74483247570228 27.991922309788546 21.432941049265153 62-63 21.666099498218156 28.914906822140907 27.883901007950477 21.535092671690457 64-65 21.63532974087583 28.75122711046733 27.975300787680556 21.638142360976282 66-67 21.73193055847079 28.65116983422709 27.873616667462255 21.743282939839865 68-69 21.701032011006138 28.449284516545838 28.03276002254842 21.816923449899605 70-71 21.692858891341597 28.2411233978463 28.12116432045726 21.944853390354837 72-73 21.77703490171696 28.293564141256095 28.081000736009788 21.848400221017165 74-75 21.666907495880043 28.380785570275897 28.066127353559693 21.886179580284367 76-77 21.753542302660453 28.296613276438524 28.02922160842082 21.9206228124802 78-79 21.68161479388145 28.302286961023064 28.03334155697414 21.982756688121345 80-81 21.700841752717466 28.28581687504975 28.094121514573683 21.919219857659105 82-83 21.702538428424724 28.247132492354716 28.204357861698654 21.845971217521903 84-85 21.847260532710763 28.235526609497096 28.09525191096029 21.821960946831854 86-87 21.72322915239045 28.23956301316513 28.098242990199584 21.93896484424484 88-89 21.801662741866636 28.188901538354784 28.09162476808137 21.917810951697213 90-91 21.810862936761886 28.17447207897444 28.164335445500132 21.850329538763543 92-93 21.87105599026753 28.029133552939207 28.206435089777028 21.893375367016237 94-95 21.681971594260787 28.110992838103428 28.27451877061997 21.932516797015815 96-97 21.606825542593768 28.17205500406316 28.33021584569803 21.89090360764504 98-99 21.863333991679976 28.700518292625265 28.325017541650784 21.111130174043975 100-101 22.05356515650713 31.595158553124286 25.62429920820363 20.726977082164947 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2129.0 1 1957.5 2 2797.0 3 4043.5 4 5652.5 5 8861.0 6 11467.5 7 13926.0 8 15795.0 9 15756.0 10 14471.5 11 13295.0 12 14856.5 13 20584.0 14 34175.0 15 52518.5 16 66921.5 17 74309.0 18 74581.5 19 70246.0 20 64329.0 21 58846.0 22 56622.5 23 61137.5 24 72263.5 25 89868.0 26 112271.0 27 135564.5 28 160416.5 29 187849.5 30 214311.0 31 240630.5 32 267684.5 33 294438.0 34 321417.5 35 343927.0 36 366229.5 37 386782.0 38 399626.5 39 408621.0 40 418529.0 41 428589.5 42 432951.0 43 436079.0 44 442492.5 45 447926.5 46 452430.0 47 455986.0 48 461291.0 49 453544.5 50 432014.5 51 412896.0 52 388490.0 53 359739.0 54 332719.0 55 304544.0 56 276120.5 57 247108.5 58 216087.5 59 184591.0 60 152396.0 61 122253.0 62 95202.0 63 71679.5 64 52270.0 65 38460.0 66 29020.5 67 21948.0 68 16454.0 69 11787.0 70 8380.5 71 6034.5 72 4242.0 73 2825.5 74 1833.0 75 1234.5 76 851.0 77 553.5 78 349.5 79 228.0 80 149.5 81 102.0 82 74.0 83 53.0 84 37.5 85 29.5 86 24.0 87 18.5 88 14.0 89 9.0 90 5.5 91 3.5 92 2.5 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 9.149967137893024E-6 2 0.02320431666169671 3 9.149967137893024E-6 4 9.149967137893024E-6 5 9.149967137893024E-6 6 9.149967137893024E-6 7 9.149967137893024E-6 8 0.0 9 0.0 10-11 3.75148652653614E-4 12-13 0.0016973189040791561 14-15 4.574983568946512E-5 16-17 0.0 18-19 0.0 20-21 4.575138250383865E-6 22-23 0.0 24-25 0.008407007535964671 26-27 0.027015785761751534 28-29 0.33200361775967624 30-31 0.31692636193185003 32-33 0.31851264967442217 34-35 0.1711529398898205 36-37 0.030910170460212844 38-39 0.029792837766399835 40-41 0.01192488681205056 42-43 0.009645952448288697 44-45 0.00407066638715393 46-47 0.0024901479008173607 48-49 0.002271731151563384 50-51 0.0021102459211890874 52-53 5.590810370151722E-4 54-55 8.481492535139073E-5 56-57 4.029265157226711E-4 58-59 8.597137865279798E-4 60-61 0.003571479409033726 62-63 0.003644281382752488 64-65 0.003384474935969145 66-67 0.0064987894146401265 68-69 0.009898483581333696 70-71 0.01372123546764932 72-73 0.013159544594077205 74-75 0.00999669737094075 76-77 0.0047529797310947005 78-79 0.0020090478662464465 80-81 0.0018377790164918844 82-83 3.19733237839673E-4 84-85 2.9424957472108964E-5 86-87 0.0 88-89 5.742397383207647E-4 90-91 0.002165952853280869 92-93 0.013786347774496254 94-95 4.504476783768048E-4 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution warn #Length Count 18-19 218.0 20-21 766.0 22-23 1639.0 24-25 3802.0 26-27 6037.0 28-29 9986.0 30-31 22689.0 32-33 29425.0 34-35 43300.0 36-37 59407.0 38-39 71026.0 40-41 74990.0 42-43 89916.0 44-45 107718.0 46-47 105366.0 48-49 93250.0 50-51 83427.0 52-53 81973.0 54-55 91615.0 56-57 99153.0 58-59 98635.0 60-61 98890.0 62-63 100716.0 64-65 107953.0 66-67 115464.0 68-69 105720.0 70-71 98594.0 72-73 95262.0 74-75 97710.0 76-77 98598.0 78-79 103127.0 80-81 105621.0 82-83 104484.0 84-85 107368.0 86-87 113494.0 88-89 121219.0 90-91 128970.0 92-93 133574.0 94-95 152293.0 96-97 228157.0 98-99 935824.0 100-101 6601625.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 81.97733584881777 #Duplication Level Percentage of deduplicated Percentage of total 1 87.99547130614216 72.13634304438624 2 7.84768223095157 12.866641637630327 3 2.2119529883498843 5.439900390232637 4 0.8565065444978459 2.8085649862004116 5 0.42497280772226825 1.741906929263172 6 0.23096434599483648 1.1360305056432756 7 0.13039940455892082 0.7482857047408759 8 0.07770368774858434 0.5095953045805891 9 0.05369695024134624 0.3961739631592887 >10 0.16825736220650817 2.036363402444528 >50 0.0019809638046139636 0.10603182290692546 >100 3.7144106368812923E-4 0.04955706230177592 >500 3.9966717742784575E-5 0.024605246509880233 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 5.4899802827358145E-5 0.0 0.0 0.0 3 0.0 5.4899802827358145E-5 0.0 0.0 0.0 4 0.0 1.0979960565471629E-4 0.0 0.0 0.0 5 0.0 1.1894957279260931E-4 0.0 0.0 0.0 6 0.0 1.1894957279260931E-4 0.0 0.0 0.0 7 0.0 1.1894957279260931E-4 0.0 0.0 0.0 8 0.0 1.555494413441814E-4 0.0 0.0 0.0 9 0.0 2.653490469988977E-4 0.0 9.149967137893024E-6 0.0 10-11 9.149967137893024E-6 2.653490469988977E-4 0.0 3.6599868551572095E-5 0.0 12-13 9.149967137893024E-6 2.699240305678442E-4 0.0 3.6599868551572095E-5 0.0 14-15 9.149967137893024E-6 3.1567386625730936E-4 0.0 4.1174852120518605E-5 0.0 16-17 9.149967137893024E-6 3.3397380053309543E-4 0.0 6.404976996525117E-5 0.0 18-19 9.149967137893024E-6 3.6142370194677445E-4 0.0 7.319973710314419E-5 0.0 20-21 9.149967137893024E-6 3.9344858692940007E-4 0.0 7.319973710314419E-5 0.0 22-23 9.149967137893024E-6 4.254734719120256E-4 0.0 1.0522462208576979E-4 0.0 24-25 9.149967137893024E-6 4.3919842261886516E-4 0.0 1.3267452349944887E-4 0.0 26-27 9.149967137893024E-6 4.4834838975675817E-4 0.0 1.7842435918891396E-4 0.0 28-29 9.149967137893024E-6 4.529233733257047E-4 0.0 4.02598554067293E-4 0.0 30-31 9.149967137893024E-6 5.53573011842528E-4 0.0 0.0011986456950639863 0.0 32-33 9.149967137893024E-6 5.672979625493675E-4 0.0 0.002982889286953126 0.0 34-35 9.149967137893024E-6 6.450726832214581E-4 0.0 0.005005032024427484 0.0 36-37 9.149967137893024E-6 7.228474038935489E-4 0.0 0.007955896426397985 0.0 38-39 9.149967137893024E-6 7.411473381693349E-4 0.0 0.012622379666723426 0.0 40-41 9.149967137893024E-6 7.868971738588001E-4 0.0 0.017805836050339825 0.0 42-43 1.8299934275786047E-5 8.509469438240512E-4 0.0 0.022879492828301505 0.0 44-45 1.8299934275786047E-5 9.790464837545537E-4 0.0 0.028932196090017744 0.0 46-47 1.8299934275786047E-5 0.0010522462208576978 0.0 0.03526397334943972 0.0 48-49 1.8299934275786047E-5 0.0010522462208576978 0.0 0.04151340090462065 0.0 50-51 1.8299934275786047E-5 0.0012535454978913445 0.0 0.04757525413347478 0.0 52-53 1.8299934275786047E-5 0.0012718454321671304 0.0 0.053856706573638335 0.0 54-55 1.8299934275786047E-5 0.0012947203500118629 0.0 0.060215933734473995 0.0 56-57 1.8299934275786047E-5 0.0013358952021323815 0.0 0.06606276273558764 0.0 58-59 1.8299934275786047E-5 0.0013450451692702747 0.0 0.07206056619447651 0.0 60-61 1.8299934275786047E-5 0.001349620152839221 0.0 0.07746362178940235 0.0 62-63 1.8299934275786047E-5 0.0013770700542529001 0.0 0.08247780378096772 0.0 64-65 1.8299934275786047E-5 0.0016286941505449584 0.0 0.0876887100659978 0.0 66-67 1.8299934275786047E-5 0.001633269134113905 0.0 0.09359501385350774 0.0 68-69 1.8299934275786047E-5 0.0016561440519586375 0.0 0.0989797695141578 0.0 70-71 1.8299934275786047E-5 0.0016744439862344234 0.0 0.104350800224101 0.0 72-73 1.8299934275786047E-5 0.001688168936941263 0.0 0.1092002828071843 0.0 74-75 1.8299934275786047E-5 0.0017293437890617816 0.0 0.11308901884078884 0.0 76-77 1.8299934275786047E-5 0.0018116934933028188 0.0 0.11687710523587655 0.0 78-79 1.8299934275786047E-5 0.001866593296130177 0.0 0.12006586878343226 0.0 80-81 1.8299934275786047E-5 0.001866593296130177 0.0 0.12143836385411622 0.0 82-83 1.8299934275786047E-5 0.0018757432632680701 0.0 0.12200566181666558 0.0 84-85 1.8299934275786047E-5 0.001903193164681749 0.0 0.12233963561719868 0.0 86-87 1.8299934275786047E-5 0.0019260680825264817 0.0 0.12247688512426708 0.0 88-89 1.8299934275786047E-5 0.0020404426717501446 0.0 0.12254550987780127 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14160 0.0 46.847557 1 GTATCAA 25740 0.0 36.38636 1 CTTATAC 10065 0.0 34.34273 1 TCAACGC 31715 0.0 28.923893 4 ATCAACG 31755 0.0 28.84745 3 CAACGCA 32380 0.0 28.303974 5 TATCAAC 33285 0.0 27.782005 2 AACGCAG 33375 0.0 27.561924 6 TATACAC 14740 0.0 26.80694 3 ACGCAGA 38685 0.0 23.779142 7 CGCAGAG 39185 0.0 23.453995 8 TTATACA 15705 0.0 23.142366 2 ACATCTC 16505 0.0 21.657278 8 GTACATG 30180 0.0 20.352007 1 GCAGAGT 45325 0.0 20.20202 9 ACACATC 17275 0.0 20.078758 6 TACATGG 30330 0.0 19.972023 2 TACACAT 20420 0.0 19.288311 5 ACATGGG 30840 0.0 19.143064 3 AGAGTAC 41615 0.0 18.980425 10-11 >>END_MODULE